Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene Hugo description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1833 to 1882 of 3228 in total 
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

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\def\wcB{0.14285714285714\textwidth}
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\def\wcE{0.14285714285714\textwidth}
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\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Hugo\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1833\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CKS2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cyclin-dependent kinases regulatory subunit 2 (cks-2). [source:swissprot;acc:p33552]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
180.409\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
182.459\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01136\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1834\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CTNNAL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
catenin (cadherin-associated protein), alpha-like 1; alpha-catulin. [source:refseq;acc:nm\_003798]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1835\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
GORASP2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
golgi reassembly stacking protein 2; golgi reassembly stacking protein 2, 55 kda. [source:refseq;acc:nm\_015530]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
194.573\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
192.396\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01132\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1836\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RPIA\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ribose 5-phosphate isomerase (ec 5.3.1.6) (phosphoriboisomerase). [source:swissprot;acc:p49247]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
208.821\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
211.17\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01125\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1837\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
KHK\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ketohexokinase (ec 2.7.1.3) (hepatic fructokinase). [source:swissprot;acc:p50053]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.984\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
221.446\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01124\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1838\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
purine nucleoside phosphorylase (ec 2.4.2.1) (inosine phosphorylase) (pnp). [source:swissprot;acc:p00491]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1839\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
EIF2S2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 2 subunit 2 (eukaryotic translation initiation factor 2 beta subunit) (eif-2-beta). [source:swissprot;acc:p20042]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
221.525\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
224.001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01118\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1840\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
APEX1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-(apurinic or apyrimidinic site) lyase (ec 4.2.99.18) (ap endonuclease 1) (apex nuclease) (apen) (ref-1 protein). [source:swissprot;acc:p27695]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.882\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
209.544\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01116\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1841\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
PARL\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
presenilins associated rhomboid-like protein. [source:refseq;acc:nm\_018622]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
212.455\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
210.113\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01115\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1842\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
BBOX1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
gamma-butyrobetaine,2-oxoglutarate dioxygenase (ec 1.14.11.1) (gamma-butyrobetaine hydroxylase) (gamma-bbh). [source:swissprot;acc:o75936]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1843\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ATP11A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
potential phospholipid-transporting atpase ih (ec 3.6.3.1) (atpase class i type 11a) (atpase is). [source:swissprot;acc:p98196]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1844\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
PAX6\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
paired box protein pax-6 (oculorhombin) (aniridia, type ii protein). [source:swissprot;acc:p26367]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
214.773\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
212.417\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01109\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1845\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ABI2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
abl-interactor 2; abl-interacting protein 1 (sh3-containing protein); abl binding protein 3; arg protein tyrosine kinase-binding protein; abl-interactor protein 2b; similar to spectrin sh3 domain binding protein 1. [source:refseq;acc:nm\_005759]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.077\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
214.702\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01106\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1846\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ABI1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
spectrin sh3 domain binding protein 1; eps8 binding protein; interactor protein ablbp4; abl-interactor protein 1 long; nap1 binding protein. [source:refseq;acc:nm\_005470]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.066\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
214.698\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01103\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1847\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
brain protein 16. [source:refseq;acc:nm\_016458]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.811\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
219.195\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.011\vspace{3pt}}}\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1848\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
BAAT\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
bile acid coenzyme a: amino acid n-acyltransferase; glycine n-choloyltransferase. [source:refseq;acc:nm\_001701]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.441\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
216.064\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1849\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ACOT1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
peroxisomal acyl-coenzyme a thioester hydrolase 2a (ec 3.1.2.2) (peroxisomal long-chain acyl-coa thioesterase 2) (zap128). [source:swissprot;acc:p49753]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.445\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
216.074\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01097\vspace{3pt}}}\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1850\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CAP1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
adenylyl cyclase-associated protein 1 (cap 1). [source:swissprot;acc:q01518]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.931\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.587\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1851\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ACOT4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
peroxisomal acyl-coa thioesterase 2b; likely ortholog of mouse peroxisomal acyl-coa thioesterase 2b. [source:refseq;acc:nm\_152331]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.448\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
216.08\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01096\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1852\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3-hydroxyisobutyryl-coenzyme a hydrolase. [source:refseq;acc:nm\_014362]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
196.008\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.154\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01095\vspace{3pt}}}\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1853\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
TTL\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tubulin-tyrosine ligase. [source:refseq;acc:nm\_153712]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.924\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
215.564\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1854\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
EIF2B5\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
translation initiation factor eif-2b epsilon subunit (eif-2b gdp-gtp exchange factor). [source:swissprot;acc:q13144]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
222.215\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
224.637\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.0109\vspace{3pt}}}\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1855\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
GRSF1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
g-rich sequence factor-1 (grsf-1). [source:swissprot;acc:q12849]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.891\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
215.542\vspace{3pt}}&\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1856\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
HNRPH3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein h3 (hnrnp h3) (hnrnp 2h9). [source:swissprot;acc:p31942]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.892\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
215.543\vspace{3pt}}&\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1857\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
EIF2B3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
translation initiation factor eif-2b gamma subunit (eif-2b gdp-gtp exchange factor). [source:swissprot;acc:q9nr50]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
222.215\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
224.637\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1858\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
HNRPF\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein f (hnrnp f). [source:swissprot;acc:p52597]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.893\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
215.545\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01089\vspace{3pt}}}\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1859\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
HNRPH1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein h (hnrnp h). [source:swissprot;acc:p31943]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
217.895\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
215.547\vspace{3pt}}}&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1860\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
HNRPH2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein h' (hnrnp h') (ftp-3). [source:swissprot;acc:p55795]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1861\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CYB5R2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cytochrome b5 reductase b5r.2. [source:refseq;acc:nm\_016229]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
210.856\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
213.147\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01087\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1862\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CYB5R1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cytochrome b5 reductase 1 (b5r.1). [source:refseq;acc:nm\_016243]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1863\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CYB5R3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
nadh-cytochrome b5 reductase (ec 1.6.2.2) (b5r). [source:swissprot;acc:p00387]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1864\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
PUF60\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
fuse-binding protein-interacting repressor isoform b; siah binding protein 1; pyrimidine tract binding splicing factor; ro ribonucleoprotein-binding protein 1; poly-u binding splicing factor puf60. [source:refseq;acc:nm\_014281]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
203.071\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
200.89\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01086\vspace{3pt}}}\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1865\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
EIF2S3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 2 subunit 3 (eukaryotic translation initiation factor 2 gamma subunit) (eif-2-gamma). [source:swissprot;acc:p41091]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
221.639\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
224.046\vspace{3pt}}&\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1866\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
EIF2B4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
translation initiation factor eif-2b delta subunit (eif-2b gdp-gtp exchange factor). [source:swissprot;acc:q9ui10]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
221.725\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
224.133\vspace{3pt}}&\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1867\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
multisynthetase complex auxiliary component p38 (jtv-1 protein) (pro0992). [source:swissprot;acc:q13155]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
203.071\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
200.89\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1868\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
TPD52L3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
protein kinase nyd-sp25. [source:refseq;acc:nm\_033516]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.642\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
209.895\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01085\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1869\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
LANCL2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
lanc lantibiotic synthetase component c-like 2; testis-specific adriamycin sensitivity protein; lanc (bacterial lantibiotic synthetase component c)-like 2; g protein-coupled receptor 69b. [source:refseq;acc:nm\_018697]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
220.107\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
217.75\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01082\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1870\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
LANCL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
lanthionine synthetase c-like protein 1; g protein-coupled receptor 69a; lanc (bacterial lantibiotic synthetase component c)-like 1; lanc (bacterial lantibiotic synthetase component). [source:refseq;acc:nm\_006055]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1871\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CLPX\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
atp-dependent clp protease atp-binding subunit clpx-like, mitochondrial precursor. [source:swissprot;acc:o76031]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
222.819\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
225.228\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01081\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1872\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLDIP2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna polymerase delta p38 subunit. [source:refseq;acc:nm\_015584]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1873\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
scratch; scratch 1. [source:refseq;acc:nm\_031309]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
210.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
208.305\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.01078\vspace{3pt}}\\\cline{1-1}\cline{3-6}
\parbox{\wcA}{\vspace{3pt}\noindent
1874\vspace{3pt}}&&\parbox{\wcC}{\vspace{3pt}\noindent
williams-beuren syndrome critical region protein 20 copy b. [source:refseq;acc:nm\_145645]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
223.862\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
226.271\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01076\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1875\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
NSUN5\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
williams beuren syndrome critical region 20a isoform 2; nol1/nop2/sun gene family member; williams-beuren syndrome critical region protein 20 copy a; williams beuren syndrome chromosome region 20. [source:refseq;acc:nm\_018044]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1876\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
NSUN5B\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
williams beuren syndrome chromosome region 20c isoform 1. [source:refseq;acc:nm\_032158]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1877\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
NUCB1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
nucleobindin 1 precursor (calnuc). [source:swissprot;acc:q02818]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
212.186\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
214.467\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01075\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1878\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MLH1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna mismatch repair protein mlh1 (mutl protein homolog 1). [source:swissprot;acc:p40692]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
1879\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
NUCB2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
nucleobindin 2 precursor (dna-binding protein nefa). [source:swissprot;acc:p80303]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1880\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CDA\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cytidine deaminase (ec 3.5.4.5) (cytidine aminohydrolase). [source:swissprot;acc:p32320]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
220.852\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
223.225\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.01074\vspace{3pt}}}\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1881\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dj850e9.1 (novel c2h2 type zinc finger protein similar to drosophila scratch (scrt), slug and xenopus snail) (fragment). [source:sptrembl;acc:q9nq03]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
210.592\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
208.355\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1882\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RPL28\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l28. [source:swissprot;acc:p46779]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.896\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.61\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0107\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Hugo is the HGNC identifier if it exists

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/