Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2908 to 2957 of 12912 in total 
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Value Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
727\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase subunit h (ec 3.6.3.14) (v-atpase h subunit) (vacuolar proton pump h subunit) (v-atpase 50/57 kda subunits) (vacuolar proton pump subunit sfd) (cgi-11). [source:swissprot;acc:q9ui12]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
25911.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30281.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16867\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
728\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
hcv ns3-transactivated protein 1. [source:refseq;acc:nm\_019048]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6000.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6696.89\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11611\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
n-acetyllactosaminide beta-1,3-n-acetylglucosaminyltransferase (ec 2.4.1.149) (poly-n-acetyllactosamine extension enzyme) (i-beta- 1,3-n-acetylglucosaminyltransferase) (ignt) (udp-glcnac:betagal beta- 1,3-n-acetylglucosaminyltransferase 6). [source:swissprot;acc:o43505]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
208.874\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
219.708\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05187\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
splicing factor 3 subunit 1 (spliceosome associated protein 114) (sap 114) (sf3a120). [source:swissprot;acc:q15459]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
59.7414\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
63.909\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06976\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase subunit b, brain isoform (ec 3.6.3.14) (v-atpase b2 subunit) (vacuolar proton pump b isoform 2) (endomembrane proton pump 58 kda subunit) (ho57). [source:swissprot;acc:p21281]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
25911.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30282.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16866\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
729\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
exocyst complex component sec15a. [source:swissprot;acc:q8tag9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.5069\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.8603\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06965\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
huntingtin interacting protein e; huntingtin interactor protein e. [source:refseq;acc:nm\_007076]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
208.874\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
219.708\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05187\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase catalytic subunit a, ubiquitous isoform (ec 3.6.3.14) (v-atpase a subunit 1) (vacuolar proton pump alpha subunit 1) (v-atpase 69 kda subunit 1) (isoform va68). [source:swissprot;acc:p38606]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6000.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6696.89\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11611\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase subunit b, kidney isoform (ec 3.6.3.14) (v- atpase b1 subunit) (vacuolar proton pump b isoform 1) (endomembrane proton pump 58 kda subunit). [source:swissprot;acc:p15313]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
25910.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30280.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16866\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
730\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
asparagine synthetase [glutamine-hydrolyzing] (ec 6.3.5.4) (glutamine- dependent asparagine synthetase) (ts11 cell cycle control protein). [source:swissprot;acc:p08243]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6000.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6696.89\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11611\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
dihydropyrimidine dehydrogenase [nadp+] precursor (ec 1.3.1.2) (dpd) (dhpdhase) (dihydrouracil dehydrogenase) (dihydrothymine dehydrogenase). [source:swissprot;acc:q12882]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
24644.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
28800.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16863\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
exocyst complex component sec15b. [source:swissprot;acc:q9y2d4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.5729\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.9286\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06961\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial import inner membrane translocase subunit tim10. [source:swissprot;acc:q9y5j8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
208.874\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
219.708\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05187\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
731\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cyclin-dependent kinases regulatory subunit 1 (cks-1) (sid1334) (pnas-16 / pnas-143). [source:swissprot;acc:p33551]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
98.2298\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
91.8648\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06929\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
fumarate hydratase, mitochondrial precursor (ec 4.2.1.2) (fumarase). [source:swissprot;acc:p07954]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
208.874\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
219.708\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05187\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
methyltransferase like 2. [source:refseq;acc:nm\_018396]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
13241.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
11864\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1161\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vinculin (metavinculin). [source:swissprot;acc:p18206]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
27463\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
32090.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16849\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
732\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cytoplasmic dynein light chain (t-complex testis-specific protein 1 homolog) (protein cw-1). [source:swissprot;acc:q15763]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
13241.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
11864\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1161\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
polymerase (rna) iii (dna directed) (32kd). [source:refseq;acc:nm\_006467]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
51.8444\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
48.4963\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06904\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
septin-like protein kiaa0202 (fragment). [source:swissprot;acc:q92599]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
124.434\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
118.318\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05169\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar proton translocating atpase 116 kda subunit a isoform 2 (v-atpase 116-kda isoform a2) (tj6). [source:swissprot;acc:q9y487]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
26029.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30414.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16845\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
733\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
acyl-coa dehydrogenase, very-long-chain specific, mitochondrial precursor (ec 1.3.99.-) (vlcad). [source:swissprot;acc:p49748]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
164\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
155.961\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05154\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
fzr1 protein; fizzy-related protein; cdc20-like 1b. [source:refseq;acc:nm\_016263]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
13241.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
11864\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1161\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
nucleolar rna-associated protein alpha isoform. [source:refseq;acc:nm\_022917]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
52.0099\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
55.5904\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06884\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar proton translocating atpase 116 kda subunit a isoform 3 (v- atpase 116-kda isoform a3) (osteoclastic proton pump 116 kda subunit) (oc-116 kda) (oc116) (t-cell immune regulator 1) (t cell immune response cdna7 protein) (tirc7). [source:swissprot;acc:q13488]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
26029.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30413.6\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16845\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
734\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
loh1cr12. [source:refseq;acc:nm\_058169]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
57.805\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
61.7803\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06877\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
presenilin-like protein 2 (ec 3.4.99.-) (sppl2a protein). [source:swissprot;acc:q8tct8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.601\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
244.534\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0513\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
proprotein convertase subtilisin/kexin type 5 precursor (ec 3.4.21.-) (proprotein convertase pc5) (subtilisin/kexin-like protease pc5) (convertase pc5) (pc6) (hpc6). [source:swissprot;acc:q92824]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
13241.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
11864\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1161\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar proton translocating atpase 116 kda subunit a isoform 1 (clathrin-coated vesicle/synaptic vesicle proton pump 116 kda subunit) (vacuolar proton pump subunit 1) (vacuolar adenosine triphosphatase subunit ac116). [source:swissprot;acc:q93050]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
26032.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30417.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16845\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
735\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
atpase, h+ transporting, lysosomal v0 subunit a isoform 4; vacuolar proton pump 116 kda accessory subunit; vacuolar proton pump, subunit 2; h(+)-transporting two-sector atpase, noncatalytic accessory protein 1b; atpase, h+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 1b; renal tubular acidosis; atpase, h+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 2 (38kd). [source:refseq;acc:nm\_020632]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
26030.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30415.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16844\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
gtp-binding nuclear protein ran (tc4) (ran gtpase) (androgen receptor- associated protein 24). [source:swissprot;acc:p17080]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.601\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
244.534\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0513\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
unr protein. [source:swissprot;acc:o75534]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
57.805\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
61.7803\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06877\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase 16 kda proteolipid subunit (ec 3.6.3.14). [source:swissprot;acc:p27449]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6434.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11554\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
736\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
presenilin-like protein 1 (ec 3.4.99.-) (sppl2b protein). [source:swissprot;acc:q8tct7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.601\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
244.534\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0513\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
putative sialoglycoprotease type 2. [source:refseq;acc:nm\_022353]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
22017.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
25721.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16827\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sarcoglycan zeta; zeta-sarcoglycan. [source:refseq;acc:nm\_139167]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6434.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11554\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
wd-repeat protein 3. [source:swissprot;acc:q9unx4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
51.5438\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
55.0853\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06871\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
737\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
golgi complex associated protein 1; golgi resident protein gcp60; peripherial benzodiazepine receptor associated protein; golgi phosphoprotein 1; pbr associated protein; pka (rialpha)-associated protein. [source:refseq;acc:nm\_022735]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6434.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11554\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
pnas-18. [source:sptrembl;acc:q9bzu3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
97.8205\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
91.5467\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06853\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
septin 10 isoform 1. [source:refseq;acc:nm\_144710]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
125.526\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
119.402\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05129\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
transducin-like enhancer protein 2 (esg2). [source:swissprot;acc:q04725]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
31479.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
36770.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16809\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
738\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
delta-sarcoglycan (sg-delta) (35 kda dystrophin-associated glycoprotein) (35dag). [source:swissprot;acc:q92629]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6434.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11554\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
syntaxin 7. [source:swissprot;acc:o15400]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
61.5022\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
65.7076\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06838\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
transducin-like enhancer protein 1 (esg1). [source:swissprot;acc:q04724]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
31467.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
36752.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16796\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
xpa-binding protein 2 (hcnp protein) (pp3898). [source:swissprot;acc:q9hcs7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
222.825\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
211.966\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05123\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
739\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cellular modulator of immune recognition. [source:refseq;acc:nm\_145021]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6434.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11554\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
exocyst complex component sec10 (hsec10). [source:swissprot;acc:o00471]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
65.3677\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
69.828\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06823\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
phosphoribosylformylglycinamidine synthase (ec 6.3.5.3) (fgam synthase) (fgams) (formylglycinamide ribotide amidotransferase) (fgarat) (formylglycinamide ribotide synthetase). [source:swissprot;acc:o15067]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
223.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
235.027\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0512\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
ribonuclease hi large subunit (ec 3.1.26.-) (rnase hi large subunit) (rnase h(35)) (ribonuclease h2) (rnase h2). [source:swissprot;acc:o75792]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
25727.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30046.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16787\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
740\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
bifunctional purine biosynthesis protein purh [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase (ec 2.1.2.3) (aicar transformylase); imp cyclohydrolase (ec 3.5.4.10) (inosinicase) (imp synthetase) (atic)]. [source:swissprot;acc:p31939]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
223.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
235.027\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0512\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/