Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2675 to 2724 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 2675\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent clathrin coat assembly protein ap50 (clathrin coat associated protein ap50) (plasma membrane adaptor ap-2 50 kda protein) (ha2 50 kda subunit) (clathrin assembly protein complex 2 medium chain) (ap-2 mu 2 chain). [source:swissprot;acc:p20172]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 7780.98\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7741.14\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00515\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2676\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp-binding cassette, sub-family c, member 10; multidrug resistance-associated protein 7. [source:refseq;acc:nm\_033450]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2677\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lysosomal alpha-mannosidase precursor (ec 3.2.1.24) (mannosidase, alpha b) (lysosomal acid alpha-mannosidase) (laman) (mannosidase alpha class 2b member 1). [source:swissprot;acc:o00754]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2678\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna polymerase i transcription factor rrn3. [source:refseq;acc:nm\_018427]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2679\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rho guanine nucleotide exchange factor 6 (pak-interacting exchange factor alpha) (alpha-pix) (cool-2). [source:swissprot;acc:q15052]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5358.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5384.44\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00479\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2680\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase pak 3 (ec 2.7.1.-) (p21-activated kinase 3) (pak-3) (beta-pak) (oligophrenin-3). [source:swissprot;acc:o75914]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5358.3\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5383.94\vspace{3pt}}}&\\\cline{1-3}\cline{5-5} \parbox{\wcA}{\vspace{3pt}\noindent 2681\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase pak 2 (ec 2.7.1.-) (p21-activated kinase 2) (pak-2) (pak65) (gamma-pak) (s6/h4 kinase). [source:swissprot;acc:q13177]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5358.31\vspace{3pt}}&&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00478\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2682\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent conserved oligomeric golgi complex subunit 5 (13s golgi transport complex 90 kda subunit) (gtc-90) (golgi transport complex 1). [source:swissprot;acc:q9up83]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5358.3\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5383.93\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2683\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase pak 1 (ec 2.7.1.-) (p21-activated kinase 1) (pak-1) (p65-pak) (alpha-pak). [source:swissprot;acc:q13153]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2684\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rho guanine nucleotide exchange factor 7 (pak-interacting exchange factor beta) (beta-pix) (cool-1) (p85). [source:swissprot;acc:q14155]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5357.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5383.33\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2685\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome c1, heme protein, mitochondrial precursor (cytochrome c-1). [source:swissprot;acc:p08574]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3953.53\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 3972.32\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00475\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2686\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent oligophrenin-1 like protein (gtpase regulator associated with focal adhesion kinase). [source:swissprot;acc:q9una1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2687\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent senescence marker protein-30 (smp-30) (regucalcin) (rc). [source:swissprot;acc:q15493]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2688\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent oligophrenin 1. [source:swissprot;acc:o60890]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2689\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuropilin- and tolloid-like protein 2 precursor. [source:refseq;acc:nm\_018092]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4113.79\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4095.53\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00446\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2690\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuropilin- and tolloid-like protein 1 isoform 3 precursor. [source:refseq;acc:nm\_138966]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2691\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heterogenous nuclear ribonucleoprotein u (hnrnp u) (scaffold attachment factor a) (saf-a). [source:swissprot;acc:q00839]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2692\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent runt-related transcription factor 2 (core-binding factor, alpha 1 subunit) (cbf-alpha 1) (acute myeloid leukemia 3 protein) (oncogene aml-3) (polyomavirus enhancer binding protein 2 alpha a subunit) (pebp2-alpha a) (pea2-alpha a) (sl3-3 enhancer factor 1 alpha a subunit) (sl3/akv core-binding factor alpha a subunit) (osteoblast- specific transcription factor 2) (osf-2). [source:swissprot;acc:q13950]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2693\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent e1b-55kda-associated protein 5 isoform a. [source:refseq;acc:nm\_007040]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2694\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l18. [source:swissprot;acc:q07020]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2695\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent endonuclease g, mitochondrial precursor (ec 3.1.30.-) (endo g). [source:swissprot;acc:q14249]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5176.92\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5154.43\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00436\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2696\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent programmed cell death protein 8, mitochondrial precursor (ec 1.-.-.-) (apoptosis-inducing factor). [source:swissprot;acc:o95831]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2697\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent t-box transcription factor tbx6 (t-box protein 6). [source:swissprot;acc:o95947]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2698\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent trub pseudouridine (psi) synthase homolog 1. [source:refseq;acc:nm\_139169]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4163.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4145.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0042\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2699\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heterogeneous nuclear ribonucleoprotein m (hnrnp m). [source:swissprot;acc:p52272]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5356.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5378.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00399\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2700\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent short coiled-coil protein; short coiled coil protein. [source:refseq;acc:nm\_032547]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5239.33\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5260\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00395\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2701\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dynein light chain 2. [source:refseq;acc:nm\_080677]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2702\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent creatine kinase, sarcomeric mitochondrial precursor (ec 2.7.3.2) (s- mtck) (mib-ck) (basic-type mitochondrial creatine kinase). [source:swissprot;acc:p17540]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8971.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9006.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00393\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2703\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent creatine kinase, ubiquitous mitochondrial precursor (ec 2.7.3.2) (u- mtck) (mia-ck) (acidic-type mitochondrial creatine kinase). [source:swissprot;acc:p12532]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8972.87\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9007.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00388\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2704\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent creatine kinase, m chain (ec 2.7.3.2) (m-ck). [source:swissprot;acc:p06732]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8980.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9013.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0037\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2705\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein cgi-27 (c21orf19-like protein). [source:swissprot;acc:q9y316]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4137.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4152.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00365\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2706\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peptidyl prolyl isomerase h; cyclophilin h. [source:refseq;acc:nm\_006347]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 8979.61\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 9012.31\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00364\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2707\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent prp18 pre-mrna processing factor 18 homolog. [source:refseq;acc:nm\_003675]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2708\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent j domain protein c21orf55. [source:swissprot;acc:q9nx36]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8979.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9012.42\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00363\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2709\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent testis-specific protein tex28. [source:swissprot;acc:o15482]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5603.24\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5583.64\vspace{3pt}}}&\multirow{16}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00351\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2710\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent similar to nuclear protein e3-3 orf1. [source:sptrembl;acc:q9bu61]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2711\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent n-acetyllactosaminide beta-1,3-n-acetylglucosaminyltransferase (ec 2.4.1.149) (poly-n-acetyllactosamine extension enzyme) (i-beta- 1,3-n-acetylglucosaminyltransferase) (ignt) (udp-glcnac:betagal beta- 1,3-n-acetylglucosaminyltransferase 6). [source:swissprot;acc:o43505]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5332.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5351.72\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2712\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent a kindred of iglon. [source:refseq;acc:nm\_173808]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5603.24\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5583.64\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2713\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ankyrin-repeat family a protein 2 (rfxank-like 2). [source:swissprot;acc:q9h9e1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2714\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent inflammation-related g protein-coupled receptor ex33. [source:refseq;acc:nm\_020370]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2715\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent huntingtin interacting protein e; huntingtin interactor protein e. [source:refseq;acc:nm\_007076]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5332.98\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5351.72\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2716\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial import inner membrane translocase subunit tim10. [source:swissprot;acc:q9y5j8]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2717\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent palmitoyl-protein thioesterase 1 precursor (ec 3.1.2.22) (palmitoyl- protein hydrolase 1). [source:swissprot;acc:p50897]\vspace{3pt}}&\multirow{8}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5603.24\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5583.64\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2718\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-soluble nsf attachment protein (snap-beta) (n-ethylmaleimide- sensitive factor attachment protein, beta). [source:swissprot;acc:q9h115]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2719\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent syntaxin 16 (syn16). [source:swissprot;acc:o14662]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2720\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 27 kda golgi snare protein (golgi snap receptor complex member 2) (membrin). [source:swissprot;acc:o14653]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2721\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent syntaxin 1a (neuron-specific antigen hpc-1). [source:swissprot;acc:q16623]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2722\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent alpha-soluble nsf attachment protein (snap-alpha) (n-ethylmaleimide- sensitive factor attachment protein, alpha). [source:swissprot;acc:p54920]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2723\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adipocyte plasma membrane-associated protein (bscv protein). [source:swissprot;acc:q9hdc9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2724\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synaptosomal-associated protein 29 (snap-29) (vesicle-membrane fusion protein snap-29) (soluble 29 kda nsf attachment protein). [source:swissprot;acc:o95721]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/