Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Value Type description Rank Gene Interaction Map Network Comparison Type Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 2625 to 2674 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 13, member 2 (renal sodium/dicarboxylate cotransporter) (na(+)/dicarboxylate cotransporter 1) (nadc-1). [source:swissprot;acc:q13183]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1079\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 7032.22\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6439.66\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09202\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 13, member 3 (sodium-dependent high-affinity dicarboxylate transporter 2) (na(+)/dicarboxylate cotransporter 3) (nadc-3) (hnadc3). [source:swissprot;acc:q8wwt9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1077\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 13, member 4 (na+/sulfate cotransporter sut-1). [source:swissprot;acc:q9ukg4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1076\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7032.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6439.63\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 2, facilitated glucose transporter, member 6 (glucose transporter type 6) (glucose transporter type 9). [source:swissprot;acc:q9ugq3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1991\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5749.69\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5429.27\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05902\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 2, facilitated glucose transporter, member 8 (glucose transporter type 8) (glucose transporter type x1). [source:swissprot;acc:q9ny64]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1992\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 20 (phosphate transporter), member 1; glvr-1; pit-1; gibbon ape leukemia virus receptor 1. [source:refseq;acc:nm\_005415]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1182\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4776.19\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4392.63\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08732\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 20 (phosphate transporter), member 2; glvr-2; pit-2; gibbon ape leukemia virus receptor 2; murine leukemia virus, amphotropic; receptor. [source:refseq;acc:nm\_006749]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1179\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 21 member 15 (organic anion transporter polypeptide-related protein 4) (oatp-rp4) (oatprp4). [source:swissprot;acc:q9h2y9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2965\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 23, member 1 (sodium-dependent vitamin c transporter 1) (hsvct1) (na(+)/l-ascorbic acid transporter 1) (yolk sac permease-like molecule 3). [source:swissprot;acc:q9uhi7]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1817\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5997\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5633.44\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06454\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 23, member 2 (sodium-dependent vitamin c transporter 2) (hsvct2) (na(+)/l-ascorbic acid transporter 2) (yolk sac permease-like molecule 2) (nucleobase transporter-like 1 protein). [source:swissprot;acc:q9ugh3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1831\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 27 (fatty acid transporter), member 4; fatty acid transport protein 4. [source:refseq;acc:nm\_005094]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2317\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7274.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6961.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04492\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 27 (fatty acid transporter), member 5; very long-chain acyl-coa synthetase homolog 2; very long-chain acyl-coa synthetase-related protein; likely ortholog of mouse solute carrier family 27 (fatty acid transporter), member 5. [source:refseq;acc:nm\_012254]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2315\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7273.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6961.11\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04493\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 27 member 3; fatty acid transport protein 3. [source:refseq;acc:nm\_024330]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2311\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7273.93\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6961.19\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 35, member b1; udp-galactose transporter related. [source:refseq;acc:nm\_005827]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2496\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5684.97\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5534.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0272\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 36 member 1; proton / amino acid symporter; lysosomal amino acid transporter 1. [source:refseq;acc:nm\_078483]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3026\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 4 (anion exchanger), member 1, adaptor protein; kidney anion exchanger adaptor protein; kanadaptin; lung cancer oncogene 3. [source:refseq;acc:nm\_018158]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 614\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 9948.93\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 11222.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12798\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent solute carrier family 5 (iodide transporter), member 8; apical iodide transporter. [source:refseq;acc:nm\_145913]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1166\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7185.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6606.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0876\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent son of sevenless protein homolog 1 (sos-1). [source:swissprot;acc:q07889]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1928\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7980.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7514.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06193\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent son of sevenless protein homolog 2 (sos-2). [source:swissprot;acc:q07890]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1905\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7967.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7497.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06257\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent son protein (son3) (negative regulatory element-binding protein) (nre- binding protein) (dbp-5) (bax antagonist selected in saccharomyces 1) (bass1) (protein c21orf50). [source:swissprot;acc:p18583]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 95\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3343.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2397.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.39481\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorcin (22 kda protein) (cp-22) (v19). [source:swissprot;acc:p30626]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 442\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7192.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6251.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.15038\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorting nexin 1. [source:swissprot;acc:q13596]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2536\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6071.35\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5932.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02348\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorting nexin 13 (rgs domain- and phox domain-containing protein) (rgs-px1). [source:swissprot;acc:q9y5w8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1972\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4126.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4374.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05994\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorting nexin 16. [source:swissprot;acc:p57768]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3108\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorting nexin 17. [source:swissprot;acc:q15036]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2551\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4824.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4725.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02087\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorting nexin 5. [source:swissprot;acc:q9y5x3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2741\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5327.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5339.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00234\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorting nexin 6 (traf4-associated factor 2). [source:swissprot;acc:q9unh7]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2657\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5371.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5327.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00824\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sorting nexin 9 (sh3 and px domain-containing protein 1) (sdp1 protein). [source:swissprot;acc:q9y5x1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1049\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5198.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4757.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09279\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent source of immunodominant mhc-associated peptides; homolog of yeast stt3 gene. [source:refseq;acc:nm\_178862]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 188\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5864.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4571.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.28281\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sparc precursor (secreted protein acidic and rich in cysteine) (osteonectin) (on) (basement membrane protein bm-40). [source:swissprot;acc:p09486]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3062\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent sparc-like protein 1 precursor (high endothelial venule protein) (hevin) (mast 9). [source:swissprot;acc:q14515]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2899\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent spartin; trans-activated by hepatitis c virus core protein 1. [source:refseq;acc:nm\_015087]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2987\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent speckle-type poz protein. [source:swissprot;acc:o43791]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3031\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent spectrin alpha chain, brain (spectrin, non-erythroid alpha chain) (alpha-ii spectrin) (fodrin alpha chain). [source:swissprot;acc:q13813]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3038\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spectrin beta chain, brain 1 (spectrin, non-erythroid beta chain 1) (beta-ii spectrin) (fodrin beta chain). [source:swissprot;acc:q01082]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1602\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5605.8\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5232.14\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.07142\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent spectrin beta chain, brain 2 (spectrin, non-erythroid beta chain 2) (beta-iii spectrin). [source:swissprot;acc:o15020]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1601\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spectrin beta chain, brain 4 (spectrin, non-erythroid beta chain 4) (beta-v spectrin) (bspecv). [source:swissprot;acc:q9nrc6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 968\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8570.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7813.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09684\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spectrin sh3 domain binding protein 1; eps8 binding protein; interactor protein ablbp4; abl-interactor protein 1 long; nap1 binding protein. [source:refseq;acc:nm\_005470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1334\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6270.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5804.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08018\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sperm tail protein shippo1; h-shippo 1. [source:refseq;acc:nm\_053280]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2797\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spermatogenesis associated 6. [source:refseq;acc:nm\_019073]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 69\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10307.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6475.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.59177\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spermidine synthase (ec 2.5.1.16) (putrescine aminopropyltransferase) (spdsy). [source:swissprot;acc:p19623]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1306\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5949.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5500.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0815\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spermine synthase (ec 2.5.1.22) (spermidine aminopropyltransferase) (spmsy). [source:swissprot;acc:p52788]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3118\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sphingolipid delta 4 desaturase; membrane fatty acid (lipid) desaturase; dihydroceramide desaturase. [source:refseq;acc:nm\_003676]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1238\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6370.31\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5873.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08457\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sphingomyelin phosphodiesterase 2 (ec 3.1.4.12) (neutral sphingomyelinase) (nsmase) (n-smase) (lyso-platelet activating factor- phospholipase c) (lyso-paf-plc). [source:swissprot;acc:o60906]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 7\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sphingosine kinase 1 (ec 2.7.1.-) (sk 1) (spk 1). [source:swissprot;acc:q9nya1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 472\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 11053.5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 9649.61\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.14549\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent sphingosine kinase 2 (ec 2.7.1.-) (sk 2) (spk 2). [source:swissprot;acc:q9nra0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 485\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent sphingosine-1-phosphate lyase 1; sphingosine-1-phosphate lyase. [source:refseq;acc:nm\_003901]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1468\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5887.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5473.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07571\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spir-2 protein (fragment). [source:sptrembl;acc:q8wwl2]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2879\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent spliceosomal u5 snrnp-specific 15 kda protein (dim1 protein homolog) (thioredoxin-like u5 snrnp protein u5-15kd). [source:swissprot;acc:o14834]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 236\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5828.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4723.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.23392\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent splicing coactivator subunit srm300; rna binding protein; at-rich element binding factor. [source:refseq;acc:nm\_016333]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1958\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5777.35\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5448.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06039\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/