Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Value Type Interaction Map description Network Comparison Type Rank Gene red Filtered green network_comparison
Results: HTML CSV LaTeX Showing element 2208 to 2257 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent protein phosphatase inhibitor 2 (ipp-2). [source:swissprot;acc:p41236]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 313\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 21644.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 18098.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1959\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein regulator of cytokinesis 1; protein regulating cytokinesis 1. [source:refseq;acc:nm\_003981]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1887\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5438.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5783.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06335\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein sck (fragment). [source:swissprot;acc:p98077]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1827\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5633.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5997\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06454\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein tara (trio-associated repeat on actin) (hrihfb2122). [source:swissprot;acc:q9h2d6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2576\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5608.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5712.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01857\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein translation factor sui1 homolog (sui1iso1). [source:swissprot;acc:p41567]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2023\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3560.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3364.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05807\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein translation factor sui1 homolog gc20. [source:swissprot;acc:o60739]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1988\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3559.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3360.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05925\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec23a (sec23-related protein a). [source:swissprot;acc:q15436]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3135\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec23b (sec23-related protein b). [source:swissprot;acc:q15437]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3127\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec24a (sec24-related protein a) (fragment). [source:swissprot;acc:o95486]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3056\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec24b (sec24-related protein b). [source:swissprot;acc:o95487]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2956\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec24c (sec24-related protein c). [source:swissprot;acc:p53992]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2910\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec24d (sec24-related protein d). [source:swissprot;acc:o94855]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2903\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec61 alpha subunit isoform 1 (sec61 alpha- 1). [source:swissprot;acc:p38378]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2079\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3614.91\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 3423.89\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05579\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec61 alpha subunit isoform 2 (sec61 alpha- 2). [source:swissprot;acc:q9y2r3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2078\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein transport protein sec61 gamma subunit. [source:swissprot;acc:p38384]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2265\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3612.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3453.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04606\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein x 0001. [source:refseq;acc:nm\_016302]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1582\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6376.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6833.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07175\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein x 0004. [source:refseq;acc:nm\_016301]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 16\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2671\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 871\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3.06659\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein-tyrosine phosphatase beta precursor (ec 3.1.3.48) (r-ptp- beta). [source:swissprot;acc:p23467]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 538\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10603.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 12069.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13825\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein-tyrosine phosphatase, non-receptor type 1 (ec 3.1.3.48) (protein-tyrosine phosphatase 1b) (ptp-1b). [source:swissprot;acc:p18031]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1247\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6278.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6807.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08421\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein-tyrosine phosphatase, non-receptor type 11 (ec 3.1.3.48) (protein-tyrosine phosphatase 2c) (ptp-2c) (ptp-1d) (sh-ptp3) (sh- ptp2) (shp-2). [source:swissprot;acc:q06124]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2789\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protein-tyrosine phosphatase, non-receptor type 2 (ec 3.1.3.48) (t- cell protein-tyrosine phosphatase) (tcptp). [source:swissprot;acc:p17706]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1248\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6275.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6803.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08415\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene c-crk (p38) (adapter molecule crk). [source:swissprot;acc:p46108]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 248\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6417.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7859.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22477\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene protein c-fos (cellular oncogene fos) (g0/g1 switch regulatory protein 7). [source:swissprot;acc:p01100]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 83\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4932.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7033.29\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.42597\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene tyrosine-protein kinase abl1 (ec 2.7.1.112) (p150) (c-abl). [source:swissprot;acc:p00519]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 253\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6417.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7859.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22477\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene tyrosine-protein kinase fer (ec 2.7.1.112) (p94-fer) (c-fer). [source:swissprot;acc:p16591]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1649\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6079.19\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6503.12\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06973\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene tyrosine-protein kinase fes/fps (ec 2.7.1.112) (c-fes). [source:swissprot;acc:p07332]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1645\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene tyrosine-protein kinase fgr (ec 2.7.1.112) (p55-fgr) (c-fgr). [source:swissprot;acc:p09769]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 255\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6417.18\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7859.6\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.22477\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene tyrosine-protein kinase fyn (ec 2.7.1.112) (p59-fyn) (syn) (slk). [source:swissprot;acc:p06241]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 254\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent proto-oncogene tyrosine-protein kinase src (ec 2.7.1.112) (p60-src) (c-src). [source:swissprot;acc:p12931]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 250\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protocadherin 15 precursor. [source:swissprot;acc:q96qu1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1181\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4392.63\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4776.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08732\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protocadherin 16 precursor (cadherin 19) (cadherin fibroblast 1). [source:swissprot;acc:q96jq0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2838\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protocadherin fat 2 precursor (hfat2) (multiple epidermal growth factor-like domains 1). [source:swissprot;acc:q9nyq8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1722\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5458.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5830.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06827\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protoheme ix farnesyltransferase, mitochondrial precursor (ec 2.5.1.-) (heme o synthase). [source:swissprot;acc:q12887]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 933\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5638.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6194.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09853\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent protoporphyrinogen oxidase (ec 1.3.3.4) (ppo). [source:swissprot;acc:p50336]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2934\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent prp18 pre-mrna processing factor 18 homolog. [source:refseq;acc:nm\_003675]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2707\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8979.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9012.31\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00364\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ptb domain adaptor protein ced-6; engulfment adapter protein. [source:refseq;acc:nm\_016315]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 364\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5189\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6088.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.17334\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ptd016 protein. [source:refseq;acc:nm\_016125]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3093\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent purine nucleoside phosphorylase (ec 2.4.2.1) (inosine phosphorylase) (pnp). [source:swissprot;acc:p00491]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1444\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5450.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5869.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07672\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent puromycin-sensitive aminopeptidase (ec 3.4.11.-) (psa). [source:swissprot;acc:p55786]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 828\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5745.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6354.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.10602\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putatative 28 kda protein. [source:refseq;acc:nm\_020143]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2747\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4708.68\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4702.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0013\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative acyl-coa thioester hydrolase cgi-16 (ec 3.1.2.-). [source:swissprot;acc:q9y305]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1060\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5719.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6248.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0926\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative adenosylhomocysteinase 2 (ec 3.3.1.1) (s-adenosyl-l- homocysteine hydrolase) (adohcyase). [source:swissprot;acc:o43865]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 626\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6228.39\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7013.19\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.126\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent putative adenosylhomocysteinase 3 (ec 3.3.1.1) (s-adenosyl-l- homocysteine hydrolase) (adohcyase). [source:swissprot;acc:q96hn2]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 628\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative ankyrin-repeat containing protein. [source:refseq;acc:nm\_025185]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1720\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5458.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5830.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06827\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative breast adenocarcinoma marker (32kd). [source:refseq;acc:nm\_014453]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 147\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 11068\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8508.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.30082\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative dimethylaniline monooxygenase [n-oxide forming] 6 (ec 1.14.13.8) (flavin-containing monooxygenase 6) (fmo 6) (dimethylaniline oxidase 6). [source:swissprot;acc:o60774]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 952\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5364.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5885.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09716\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative eukaryotic translation initiation factor 1a (eif-1a) (eif- 4c). [source:swissprot;acc:o75642]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2439\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3754.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3629.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03441\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative eukaryotic translation initiation factor 3 subunit (eif-3) (fragment). [source:swissprot;acc:o75153]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1193\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5464.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5940.16\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08697\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm\_016172]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 291\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 44490.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 36927.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.20481\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent putative gtp-binding protein ptd004 (pro2455). [source:swissprot;acc:q9ntk5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2089\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5775.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6094.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05535\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/