Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1962 to 2011 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1962\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent c-jun-amino-terminal kinase interacting protein 3 (jnk-interacting protein 3) (jip-3) (jnk map kinase scaffold protein 3) (mitogen- activated protein kinase 8-interacting protein 3). [source:swissprot;acc:q9upt6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5941.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6297.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06001\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1963\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phenylalanine-4-hydroxylase (ec 1.14.16.1) (pah) (phe-4- monooxygenase). [source:swissprot;acc:p00439]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4374.32\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4126.96\vspace{3pt}}}&\multirow{11}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05994\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1964\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pp3111 protein. [source:refseq;acc:nm\_022156]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1965\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent syntaxin 18. [source:swissprot;acc:q9p2w9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1966\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rd protein. [source:swissprot;acc:p18615]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1967\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s4, y isoform 2. [source:swissprot;acc:q8td47]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3678.56\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3470.55\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1968\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione transferase omega 1 (ec 2.5.1.18) (gsto 1-1). [source:swissprot;acc:p78417]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4374.32\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4126.96\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1969\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent androgen-induced 1; cgi-103 protein; androgen induced protein. [source:refseq;acc:nm\_016108]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1970\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp synthase b chain, mitochondrial precursor (ec 3.6.3.14). [source:swissprot;acc:p24539]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1971\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent j domain containing protein 1. [source:swissprot;acc:q9ukb3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1972\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sorting nexin 13 (rgs domain- and phox domain-containing protein) (rgs-px1). [source:swissprot;acc:q9y5w8]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1973\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ba127l20.1 (novel glutathione-s-transferase). [source:sptrembl;acc:q9h4y5]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1974\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s4, x isoform (single copy abundant mrna protein) (scr10). [source:swissprot;acc:p12750]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3678.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3470.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05993\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1975\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cop9 complex subunit 4; likely ortholog of mouse cop9 (constitutive photomorphogenic), subunit 4 (arabidopsis); cop9 (constitutive photomorphogenic, arabidopsis, homolog) subunit 4. [source:refseq;acc:nm\_016129]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6988.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7406.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05985\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1976\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent splicing factor arginine/serine-rich 11 (arginine-rich 54 kda nuclear protein) (p54). [source:swissprot;acc:q05519]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5939.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6294.91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05978\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1977\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lim domain only 7; zinc-finger domain-containing protein; lomp protein; f-box only protein 20; f-box protein fbx20. [source:refseq;acc:nm\_005358]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5782.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6126.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05946\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1978\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent uv excision repair protein rad23 homolog a (hhr23a). [source:swissprot;acc:p54725]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5475.74\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5800.97\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05939\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1979\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 4 (26s proteasome regulatory subunit s5a) (rpn10) (multiubiquitin chain binding protein) (antisecretory factor-1) (af) (asf). [source:swissprot;acc:p55036]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1980\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bile acid coenzyme a: amino acid n-acyltransferase; glycine n-choloyltransferase. [source:refseq;acc:nm\_001701]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5830.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6176.71\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1981\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent inositol polyphosphate 5-phosphatase ocrl-1 (ec 3.1.3.36) (lowe's oculocerebrorenal syndrome protein). [source:swissprot;acc:q01968]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5475.74\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5800.97\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1982\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent uv excision repair protein rad23 homolog b (hhr23b) (xp-c repair complementing complex 58 kda protein) (p58). [source:swissprot;acc:p54727]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1983\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myosin vi. [source:swissprot;acc:q9um54]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1984\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peroxisomal acyl-coenzyme a thioester hydrolase 2a (ec 3.1.2.2) (peroxisomal long-chain acyl-coa thioesterase 2) (zap128). [source:swissprot;acc:p49753]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5830.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6176.1\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05936\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1985\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent scribble. [source:refseq;acc:nm\_015356]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5516.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5844.37\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1986\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lap (leucine-rich repeats and pdz) and no pdz protein. [source:refseq;acc:nm\_018214]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5517.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5844.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05935\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1987\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peroxisomal acyl-coa thioesterase 2b; likely ortholog of mouse peroxisomal acyl-coa thioesterase 2b. [source:refseq;acc:nm\_152331]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5829.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6175.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05934\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1988\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein translation factor sui1 homolog gc20. [source:swissprot;acc:o60739]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3559.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3360.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05925\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1989\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent m-phase inducer phosphatase 2 (ec 3.1.3.48) (dual specificity phosphatase cdc25b). [source:swissprot;acc:p30305]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4383.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4642.93\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05922\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1990\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor-like protein mrg15 (morf-related gene 15 protein) (mortality factor 4-like 1) (msl3-1 protein) (hspc008/hspc061). [source:swissprot;acc:q9ubu8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5045.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5344.06\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05914\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1991\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 2, facilitated glucose transporter, member 6 (glucose transporter type 6) (glucose transporter type 9). [source:swissprot;acc:q9ugq3]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5429.27\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5749.69\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05902\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1992\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 2, facilitated glucose transporter, member 8 (glucose transporter type 8) (glucose transporter type x1). [source:swissprot;acc:q9ny64]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1993\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleoporin like 1. [source:refseq;acc:nm\_014089]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6174.74\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6538.73\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05895\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1994\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rho guanine nucleotide exchange factor 4 isoform a; apc-stimulated guanine nucleotide exchange factor. [source:refseq;acc:nm\_015320]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1995\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cdc42 guanine exchange factor 9; hpem-2 collybistin. [source:refseq;acc:nm\_015185]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1996\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent survival motor neuron protein (component of gems 1) (gemin1). [source:swissprot;acc:q16637]\vspace{3pt}}&\multirow{8}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5047.2\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5344.68\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05894\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1997\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ras-related c3 botulinum toxin substrate 1 (p21-rac1) (ras-like protein tc25). [source:swissprot;acc:p15154]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1998\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ras-related c3 botulinum toxin substrate 3 (p21-rac3). [source:swissprot;acc:o14658]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1999\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleoporin 54kda; nucleoporin p54. [source:refseq;acc:nm\_017426]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2000\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ras-related c3 botulinum toxin substrate 2 (p21-rac2) (small g protein) (gx). [source:swissprot;acc:p15153]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2001\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna replication licensing factor mcm5 (cdc46 homolog) (p1-cdc46). [source:swissprot;acc:p33992]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2002\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent survival of motor neuron protein-interacting protein 1 (smn- interacting protein 1) (component of gems 2) (gemin2). [source:swissprot;acc:o14893]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2003\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent probable atp-dependent rna helicase ddx20 (dead-box protein 20) (dead- box protein dp 103) (component of gems 3) (gemin3). [source:swissprot;acc:q9uhi6]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2004\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor-like protein morf4 (mortality factor 4) (cellular senescence-related protein 1) (sen1). [source:swissprot;acc:q9y690]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5047.87\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5344.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05885\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2005\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp-citrate synthase (ec 2.3.3.8) (atp-citrate (pro-s-)-lyase) (citrate cleavage enzyme). [source:swissprot;acc:p53396]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6064.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6421.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05882\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2006\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor-like protein mrgx (morf-related gene x protein) (mortality factor 4-like 2) (msl3-2 protein). [source:swissprot;acc:q15014]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5048.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5345.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0588\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2007\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adaptor-related protein complex 1, mu 1 subunit (mu-adaptin 1) (adaptor protein complex ap-1 mu-1 subunit) (golgi adaptor ha1/ap1 adaptin mu-1 subunit) (clathrin assembly protein assembly protein complex 1 medium chain 1) (clathrin coat assembly protein ap47) (clathrin coat associated protein ap47) (ap-mu chain family member mu1a). [source:swissprot;acc:q9bxs5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5684.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6018.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05877\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2008\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s15a. [source:swissprot;acc:p39027]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3637.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3435.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05876\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2009\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent folylpolyglutamate synthase, mitochondrial precursor (ec 6.3.2.17) (folylpoly-gamma-glutamate synthetase) (fpgs). [source:swissprot;acc:q05932]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4934.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5223.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05861\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2010\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adaptor-related protein complex 1, mu 2 subunit (mu-adaptin 2) (adaptor protein complex ap-1 mu-2 subunit) (golgi adaptor ha1/ap1 adaptin mu-2 subunit) (clathrin assembly protein assembly protein complex 1 medium chain 2) (ap-mu chain family member mu1b). [source:swissprot;acc:q9y6q5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5671.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6003.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05855\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2011\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hyaluronan synthase 2 (ec 2.4.1.212) (hyaluronate synthase 2) (hyaluronic acid synthase 2) (ha synthase 2). [source:swissprot;acc:q92819]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5391.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5706.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0585\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/