Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.
Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene Hugo Network Comparison Type description Value Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX
Showing element 1575 to 1624 of 66312 in total
Filtered: 1

\def\wcA{0.1\textwidth}
\def\wcB{0.1\textwidth}
\def\wcC{0.1\textwidth}
\def\wcD{0.1\textwidth}
\def\wcE{0.1\textwidth}
\def\wcF{0.1\textwidth}
\def\wcG{0.1\textwidth}
\def\wcH{0.1\textwidth}
\def\wcI{0.1\textwidth}
\begin{longtable}{|c|c|c|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Hugo\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Value Type\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{10}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
99\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
EIF4B\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 4b (eif-4b). [source:swissprot;acc:p23588]\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
200.497\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcH}{\vspace{3pt}\noindent
185.679\vspace{3pt}}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.0798\vspace{3pt}}\\\cline{3-3}\cline{9-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&&&&&\parbox{\wcI}{\vspace{3pt}\noindent
14.818\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
GPSM2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
mosaic protein lgn. [source:swissprot;acc:p81274]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
47.6504\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
36.9304\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.29028\vspace{3pt}}\\\cline{2-4}\cline{6-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
NFU1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
hira-interacting protein 5 (cgi-33). [source:swissprot;acc:q9ums0]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
96.9641\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
103.242\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
6.2779\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
RAB37\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
ras-related protein rab-37. [source:swissprot;acc:q96ax2]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
61163.4\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
51924\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.17794\vspace{3pt}}\\\cline{2-4}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SEPT1\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
septin 1 (larp) (serologically defined breast cancer antigen ny-br- 24). [source:swissprot;acc:q8wyj6]\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
59884.7\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
68850.8\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8966.1\vspace{3pt}}\\\cline{2-2}\cline{4-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SEPT7\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
septin 7 (cdc10 protein homolog). [source:swissprot;acc:q16181]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
15999.1\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
19007.1\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
3008\vspace{3pt}}\\\cline{2-4}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SKP1A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
s-phase kinase-associated protein 1a (cyclin a/cdk2-associated protein p19) (p19a) (p19skp1) (rna polymerase ii elongation factor-like protein) (organ of corti protein 2) (ocp-ii protein) (ocp-2) (transcription elongation factor b) (siii). [source:swissprot;acc:p34991]\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
2353.63\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
3225.65\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.3705\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
TOB2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
tob2 protein (transducer of erbb-2 2). [source:swissprot;acc:q14106]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
19.9625\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
35.798\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
15.8355\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
WDR33\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
wd-repeat protein wdc146. [source:swissprot;acc:q9c0j8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
226186\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcH}{\vspace{3pt}\noindent
145568\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcI}{\vspace{3pt}\noindent
1.55382\vspace{3pt}}}\\\cline{1-2}\cline{4-4}
\multirow{16}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
100\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
CPSF1\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 160 kda subunit (cpsf 160 kda subunit). [source:swissprot;acc:q10570]\vspace{3pt}}&&&&&\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
FBXW7\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
f-box protein fbw7 isoform 2; archipelago, drosophila, homolog of; f-box protein fbw7; f-box protein sel-10; homolog of c elegans sel-10. [source:refseq;acc:nm\_018315]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
2353.63\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
3225.65\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.3705\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
FOSL2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
fos-related antigen 2. [source:swissprot;acc:p15408]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
204.641\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
161.046\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
43.595\vspace{3pt}}\\\cline{2-4}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
MAGEA10\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
melanoma-associated antigen 10 (mage-10 antigen). [source:swissprot;acc:p43363]\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.24949\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
PSCD3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
12375.5\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
11435.8\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
939.7\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
RGS17\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
regulator of g-protein signaling 17 (rgs17). [source:swissprot;acc:q9ugc6]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
47.6504\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
36.9304\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.29028\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SEPT6\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
septin 6. [source:swissprot;acc:q14141]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
15959.9\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
18957.1\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
2997.2\vspace{3pt}}\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SEPT7\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
septin 7 (cdc10 protein homolog). [source:swissprot;acc:q16181]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
89182.8\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
125229\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
36046.2\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SLC11A1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
natural resistance-associated macrophage protein 1 (nramp 1). [source:swissprot;acc:p49279]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
63.7749\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
69.4515\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.08901\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SLC16A2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
monocarboxylate transporter 8 (mct 8) (x-linked pest-containing transporter) (mct 7). [source:swissprot;acc:p36021]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
63904\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
72791.6\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8887.6\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
SLC7A9\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
b(0,+)-type amino acid transporter 1 (b(0,+)at) (glycoprotein- associated amino acid transporter b0,+at1). [source:swissprot;acc:p82251]\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
200.497\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcH}{\vspace{3pt}\noindent
185.679\vspace{3pt}}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.0798\vspace{3pt}}\\\cline{3-3}\cline{9-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&&&&&\parbox{\wcI}{\vspace{3pt}\noindent
14.818\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SMYD2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
set and mynd domain containing 2; hskm-b protein; zinc finger, mynd domain containing 14. [source:refseq;acc:nm\_020197]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
5752.65\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
6330.03\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.10037\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
TFDP2\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
transcription factor dp-2 (e2f dimerization partner 2). [source:swissprot;acc:q14188]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
61.9982\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
68.2337\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
6.2355\vspace{3pt}}\\\cline{2-2}\cline{4-4}\cline{6-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
TOB1\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
tob1 protein (transducer of erbb-2 1). [source:swissprot;acc:p50616]\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
19.9625\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
35.798\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
15.8355\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
TP53I3\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
tumor protein p53 inducible protein 3; quinone oxidoreductase homolog; p53-induced gene 3 protein. [source:refseq;acc:nm\_004881]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
70019.5\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
82296.2\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.17533\vspace{3pt}}\\\cline{1-2}\cline{4-4}\cline{7-9}
\multirow{16}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
101\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
raptor; p150 target of rapamycin (tor)-scaffold protein containing wd-repeats. [source:refseq;acc:nm\_020761]\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
63526.9\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
54384.3\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.16811\vspace{3pt}}\\\cline{2-2}\cline{4-4}\cline{6-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
CPSF2\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 100 kda subunit (cpsf 100 kda subunit) (fragment). [source:swissprot;acc:q9p2i0]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
222655\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
143584\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.5507\vspace{3pt}}\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
CUL2\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
cullin homolog 2 (cul-2). [source:swissprot;acc:q13617]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
2353.63\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
3225.65\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.3705\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
DAB2IP\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
dab2 interacting protein; ngap-like protein; doc-2/dab2 interactive protein. [source:refseq;acc:nm\_032552]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
19.9625\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
35.798\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
15.8355\vspace{3pt}}\\\cline{2-2}\cline{4-4}\cline{6-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
DVL1\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
segment polarity protein dishevelled homolog dvl-1 (dishevelled-1) (dsh homolog 1). [source:swissprot;acc:o14640]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
68.4921\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
74.6877\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
6.1956\vspace{3pt}}\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
F13A1\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
coagulation factor xiii a chain precursor (ec 2.3.2.13) (protein- glutamine gamma-glutamyltransferase a chain) (transglutaminase a chain). [source:swissprot;acc:p00488]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
226.395\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
211.713\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
14.682\vspace{3pt}}\\\cline{2-2}\cline{4-4}\cline{6-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
FOSB\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
protein fosb (g0/g1 switch regulatory protein 3). [source:swissprot;acc:p53539]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
204.641\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
161.051\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
43.59\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
GNAO1\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
guanine nucleotide-binding protein g(o), alpha subunit 1. [source:swissprot;acc:p09471]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
47.6504\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
36.9304\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.29028\vspace{3pt}}\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
MAGEB4\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
melanoma-associated antigen b1 (mage-b1 antigen) (mage-xp antigen) (dss-ahc critical interval mage superfamily 10) (dam10). [source:swissprot;acc:p43366]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.24949\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
PANK3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
pantothenate kinase 3 (ec 2.7.1.33) (pantothenic acid kinase 3) (hpank3). [source:swissprot;acc:q9h999]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
10685.5\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
11612.9\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
927.4\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
ROGDI\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
leucine zipper domain protein. [source:refseq;acc:nm\_024589]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
221.996\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
238.82\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.07579\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SEPT4\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
septin 4 (peanut-like protein 2) (brain protein h5) (cell division control-related protein 2) (hcdcrel-2) (bradeion beta) (ce5b3 beta) (cerebral protein-7) (hucep-7). [source:swissprot;acc:o43236]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
14924.4\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
17655.2\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
2730.8\vspace{3pt}}\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SEPT6\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
septin 6. [source:swissprot;acc:q14141]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
88953.6\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
124854\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
35900.4\vspace{3pt}}\\\cline{2-2}\cline{4-4}\cline{6-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SLC16A10\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
solute carrier family 16 (monocarboxylic acid transporters), member 10; t-type amino acid transporter 1. [source:refseq;acc:nm\_018593]\vspace{3pt}}&&\multirow{4}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
63903.1\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
72790.2\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8887.1\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
SMYD1\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
set and mynd domain containing protein 1. [source:sptrembl;acc:q8nb12]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
5752.65\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
6330.03\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.10037\vspace{3pt}}\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
VPS33A\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
vacuolar protein sorting 33a (hvps33a). [source:swissprot;acc:q96ax1]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
69.1897\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
75.3346\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.08881\vspace{3pt}}\\\cline{1-2}\cline{4-5}\cline{7-9}
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
102\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
CD109\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
cd109; gov system alloantigens on platelets. [source:refseq;acc:nm\_133493]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
54707.9\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
46852.3\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.16767\vspace{3pt}}\\\cline{2-4}\cline{6-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
CLP1\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
pre-mrna cleavage complex ii protein clp1. [source:swissprot;acc:q92989]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
121200\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
85473.4\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
35726.6\vspace{3pt}}\\\cline{2-2}\cline{4-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
CPEB4\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
cytoplasmic polyadenylation element binding protein 4. [source:refseq;acc:nm\_030627]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
19.9625\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
35.798\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
15.8355\vspace{3pt}}\\\cline{2-9}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
DGKQ\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
diacylglycerol kinase, theta (ec 2.7.1.107) (diglyceride kinase) (dgk- theta) (dag kinase theta). [source:swissprot;acc:p52824]\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
229.556\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
213.456\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.07543\vspace{3pt}}\\\cline{5-5}\cline{7-9}
&&&&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
61.2565\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
66.6812\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.08856\vspace{3pt}}\\\cline{2-4}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
DVL2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
segment polarity protein dishevelled homolog dvl-2 (dishevelled-2) (dsh homolog 2). [source:swissprot;acc:o14641]\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
68.5063\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
74.6906\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
6.1843\vspace{3pt}}\\\cline{2-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
FIP1L1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
fip1-like 1; rearranged in hypereosinophilia. [source:refseq;acc:nm\_030917]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
214143\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
138337\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1.54798\vspace{3pt}}\\\cline{2-5}\cline{7-9}
&\parbox{\wcB}{\vspace{3pt}\noindent
FOSL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
fos-related antigen 1 (fra-1). [source:swissprot;acc:p15407]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
204.642\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
161.068\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
43.574\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Hugo is the HGNC identifier if it exists

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/