Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1532 to 1581 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1532\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna-binding protein 10 (rna binding motif protein 10) (dxs8237e). [source:swissprot;acc:p98175]\vspace{3pt}}&\multirow{8}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 228.419\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 232.376\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01732\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1533\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome c. [source:swissprot;acc:p00001]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1534\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heparan sulfate 6-o-sulfotransferase 2. [source:refseq;acc:nm\_147174]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1535\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heparan sulfate 6-o-sulfotransferase; heparan-sulfate 6-sulfotransferase. [source:refseq;acc:nm\_004807]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1536\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fatty acid hydroxylase domain containing 1. [source:refseq;acc:nm\_024306]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1537\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ww domain binding protein 11; npw38-binding protein npwbp; sh3 domain-binding protein snp70. [source:refseq;acc:nm\_016312]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1538\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent elac homolog 2; putative prostate cancer susceptibility protein; elac (e. coli) homolog 2. [source:refseq;acc:nm\_018127]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1539\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna-binding protein 5 (rna binding motif protein 5) (putative tumor suppressor luca15) (g15 protein). [source:swissprot;acc:p52756]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1540\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent autophagy protein 5-like (apg5-like) (apoptosis-specific protein). [source:swissprot;acc:q9h1y0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 240.077\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 236.015\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01721\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1541\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myb proto-oncogene protein (c-myb). [source:swissprot;acc:p10242]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.672\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01714\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1542\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent trimethyllysine dioxygenase, mitochondrial precursor (ec 1.14.11.8) (epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (tml-alpha- ketoglutarate dioxygenase) (tml hydroxylase) (tml dioxygenase) (tmld). [source:swissprot;acc:q9nvh6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 213.546\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 209.965\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01706\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1543\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gtp-binding protein era homolog (hera) (fragment). [source:swissprot;acc:o75616]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1544\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent orphan nuclear receptor nr2e1 (nuclear receptor tlx) (tailless homolog) (tll) (htll). [source:swissprot;acc:q9y466]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.762\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 216.081\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01704\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1545\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent orphan nuclear receptor tr2. [source:swissprot;acc:p13056]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 216.083\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01702\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1546\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent argininosuccinate synthase (ec 6.3.4.5) (citrulline--aspartate ligase). [source:swissprot;acc:p00966]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.769\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.474\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01701\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1547\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myb-related protein b (b-myb). [source:swissprot;acc:p10244]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.541\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.823\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01699\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1548\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myb-related protein a (a-myb). [source:swissprot;acc:p10243]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.512\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.802\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01696\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1549\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dynactin complex 50 kda subunit (50 kda dynein-associated polypeptide) (dynamitin) (dctn-50) (dynactin 2). [source:swissprot;acc:q13561]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 225.159\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 221.424\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01687\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1550\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adp,atp carrier protein, liver isoform t2 (adp/atp translocase 3) (adenine nucleotide translocator 3) (ant 3). [source:swissprot;acc:p12236]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1551\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adp,atp carrier protein, heart/skeletal muscle isoform t1 (adp/atp translocase 1) (adenine nucleotide translocator 1) (ant 1). [source:swissprot;acc:p12235]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1552\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adp,atp carrier protein, fibroblast isoform (adp/atp translocase 2) (adenine nucleotide translocator 2) (ant 2). [source:swissprot;acc:p05141]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1553\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adenosylhomocysteinase (ec 3.3.1.1) (s-adenosyl-l-homocysteine hydrolase) (adohcyase). [source:swissprot;acc:p23526]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.389\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.833\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01679\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1554\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent c-terminal binding protein 1 (ctbp1). [source:swissprot;acc:q13363]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 196.215\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.018\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01656\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1555\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pas domain containing serine/threonine kinase; pas-serine/threonine kinase. [source:refseq;acc:nm\_015148]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 196.192\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 192.996\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1556\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent b-cell lymphoma 6 protein (bcl-6) (zinc finger protein 51) (laz-3 protein) (bcl-5). [source:swissprot;acc:p41182]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1557\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein slug (neural crest transcription factor slug) (snail homolog 2). [source:swissprot;acc:o43623]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1558\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent c-terminal binding protein 2 (ctbp2). [source:swissprot;acc:p56545]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 196.171\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 192.977\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01655\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1559\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent b-cell cll/lymphoma 6, member b (zinc finger protein); zinc finger protein 62. [source:refseq;acc:nm\_181844]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 196.191\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 192.996\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1560\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent p66 alpha. [source:refseq;acc:nm\_017660]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 167.687\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 170.455\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01651\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1561\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription repressor p66 beta component of the mecp1 complex. [source:refseq;acc:nm\_020699]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1562\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tyrosine aminotransferase (ec 2.6.1.5) (l-tyrosine:2-oxoglutarate aminotransferase) (tat). [source:swissprot;acc:p17735]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1563\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp synthase gamma chain, mitochondrial precursor (ec 3.6.3.14). [source:swissprot;acc:p36542]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 218.277\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 214.739\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01648\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1564\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp synthase oligomycin sensitivity conferral protein, mitochondrial precursor (ec 3.6.3.14) (oscp). [source:swissprot;acc:p48047]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1565\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent eukaryotic translation initiation factor 3 subunit 11 (eif-3 p25) (eif3k) (muscle specific gene m9 protein) (ptd001) (hspc029) (arg134). [source:swissprot;acc:q9ubq5]\vspace{3pt}}&\multirow{8}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 221.128\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 224.767\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01646\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1566\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent erythroid differentiation and denucleation factor 1. [source:swissprot;acc:o60584]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1567\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bardet-biedl syndrome 7 protein isoform a; bbs2-like 1. [source:refseq;acc:nm\_176824]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1568\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ba508n22.1 (hspc025) (fragment). [source:sptrembl;acc:q9hcw5]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1569\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lipopolysaccharide-responsive and beige-like anchor protein (cdc4-like protein) (beige-like protein). [source:swissprot;acc:p50851]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1570\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein c20orf45 (cgi-107). [source:swissprot;acc:q9y3b1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1571\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent eukaryotic translation initiation factor 3 subunit 6 interacting protein (hspc021/hspc025). [source:swissprot;acc:q9y262]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1572\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative rna-binding protein 7 (rna binding motif protein 7). [source:swissprot;acc:q9y580]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1573\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent r3h domain protein 1. [source:swissprot;acc:q15032]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.105\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.573\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1574\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tata element modulatory factor (tmf). [source:swissprot;acc:p82094]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 222.585\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.982\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01645\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1575\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent scy1-like 1; telomerase regulation-associated protein; ht019 protein; telomerase regulation-associated protein; n-terminal kinase-like protein; teratoma-associated tyrosine kinase; n-terminal kinase-like. [source:refseq;acc:nm\_020680]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1576\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nuclear pore complex protein nup98 (nucleoporin nup98) (98 kda nucleoporin). [source:swissprot;acc:p52948]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1577\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ammecr1 protein. [source:refseq;acc:nm\_015365]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1578\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mrna-associated protein mrnp 41 (rae1 protein homolog). [source:swissprot;acc:p78406]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1579\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cda11 protein. [source:refseq;acc:nm\_032026]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.181\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 209.732\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01644\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1580\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent g2/mitotic-specific cyclin b2. [source:swissprot;acc:o95067]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 168.018\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 170.769\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01637\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1581\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cell division protein kinase 3 (ec 2.7.1.-). [source:swissprot;acc:q00526]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 168.002\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 170.753\vspace{3pt}}&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/