Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2480 to 2529 of 6456 in total
Value Type: Ranked
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1240\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent signal transducer and activator of transcription 1-alpha/beta (transcription factor isgf-3 components p91/p84). [source:swissprot;acc:p42224]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.574\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 227.752\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.178\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1241\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent keratin associated protein 4.9 (fragment). [source:sptrembl;acc:q9byq8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent signal transducer and activator of transcription 3 (acute-phase response factor). [source:swissprot;acc:p40763]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.573\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 227.75\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.177\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1242\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent keratin associated protein 4-12; keratin associated protein 4.12. [source:refseq;acc:nm\_031854]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent ral guanine nucleotide dissociation stimulator (ralgef) (ralgds). [source:swissprot;acc:q12967]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 162.055\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 156.884\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.171\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1243\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent keratin associated protein 1.5. [source:refseq;acc:nm\_031957]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.699\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent signal transducer and activator of transcription 6 (il-4 stat). [source:swissprot;acc:p42226]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.569\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 227.739\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.17\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1244\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent star-related lipid transfer protein 6 (stard6) (start domain- containing protein 6). [source:swissprot;acc:p59095]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tumor protein d53 (hd53) (d52-like 1). [source:swissprot;acc:q16890]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.774\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.936\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.162\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1245\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent keratin, ultra high-sulfur matrix protein b (uhs keratin b) (uhs kerb). [source:swissprot;acc:o75690]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.699\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tumor protein d52 (n8 protein). [source:swissprot;acc:p55327]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.771\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.926\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.155\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1246\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent keratin, ultra high-sulfur matrix protein a (uhs keratin a) (uhs kera). [source:swissprot;acc:p26371]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.699\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sestrin 3. [source:swissprot;acc:p58005]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 213.219\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 5.149\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1247\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent sestrin 2 (hi95). [source:swissprot;acc:p58004]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent star-related lipid transfer protein 5 (stard5) (start domain- containing protein 5). [source:swissprot;acc:q9nsy2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1248\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4a11 precursor (ec 1.14.15.3) (cypiva11) (fatty acid omega-hydroxylase) (p-450 hk omega) (lauric acid omega-hydroxylase) (cyp4aii) (p450-hl-omega). [source:swissprot;acc:q02928]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent keratin associated protein 4.4. [source:refseq;acc:nm\_032524]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.699\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}}\\\cline{1-2}\cline{5-5} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1249\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent alpha-parvin (calponin-like integrin-linked kinase binding protein) (ch-ilkbp). [source:swissprot;acc:q9nvd7]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f3 (ec 1.14.13.30) (cypivf3) (leukotriene-b4 omega- hydroxylase) (leukotriene-b4 20-monooxygenase) (cytochrome p450- ltb-omega). [source:swissprot;acc:q08477]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1250\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f8 (ec 1.14.14.1) (cypivf8). [source:swissprot;acc:p98187]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent pinch protein (particularly interesting new cys-his protein) (lim and senescent cell antigen-like domains 1). [source:swissprot;acc:p48059]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1251\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent integrin-linked protein kinase 1 (ec 2.7.1.-) (ilk-1) (59 kda serine/threonine protein kinase) (p59ilk). [source:swissprot;acc:q13418]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent likely ortholog of rat cytochrome p450 4x1. [source:refseq;acc:nm\_178033]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1252\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f12 (ec 1.14.14.1) (cypivf12). [source:swissprot;acc:q9hcs2]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent star-related lipid transfer protein 4 (stard4) (start domain- containing protein 4). [source:swissprot;acc:q96dr4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1253\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f2 (ec 1.14.13.30) (cypivf2) (leukotriene-b4 omega- hydroxylase) (leukotriene-b4 20-monooxygenase) (cytochrome p450- ltb-omega). [source:swissprot;acc:p78329]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent ras suppressor protein 1 (rsu-1) (rsp-1). [source:swissprot;acc:q15404]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1254\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f11 (ec 1.14.14.1) (cypivf11). [source:swissprot;acc:q9hbi6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent ras-gtpase-activating protein binding protein 1 (gap sh3-domain binding protein 1) (g3bp-1). [source:swissprot;acc:q13283]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1255\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dj18d14.4 (cytochrome p450, subfamily iva, polypeptide 11). [source:sptrembl;acc:q9ntl5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent ras-gtpase-activating protein binding protein 2 (gap sh3-domain binding protein 2) (g3bp-2). [source:swissprot;acc:q9un86]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1256\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4b1 (ec 1.14.14.1) (cypivb1) (p450-hp). [source:swissprot;acc:p13584]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent keratin associated protein 1-3; keratin associated protein 1.3. [source:refseq;acc:nm\_030966]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.699\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}}\\\cline{1-2}\cline{5-5} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1257\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent espin. [source:refseq;acc:nm\_031475]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent flotillin-1. [source:swissprot;acc:o75955]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1258\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 2d6 (ec 1.14.14.1) (cypiid6) (p450-db1) (debrisoquine 4-hydroxylase). [source:swissprot;acc:p10635]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sestrin 1 (p53-regulated protein pa26). [source:swissprot;acc:q9y6p5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.148\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1259\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent pleckstrin homology domain containing, family c (with ferm domain) member 1; mitogen inducible 2; kindlin 2. [source:refseq;acc:nm\_006832]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent signal transducer and activator of transcription 5a. [source:swissprot;acc:p42229]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.546\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 227.673\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.127\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1260\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent lim and senescent cell antigen-like domains 2; ilk-binding protein. [source:refseq;acc:nm\_017980]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent signal transducer and activator of transcription 5b. [source:swissprot;acc:p51692]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.544\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 227.667\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.123\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1261\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent d(4) dopamine receptor (d(2c) dopamine receptor). [source:swissprot;acc:p21917]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.354\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02437\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent t-complex protein 1, epsilon subunit (tcp-1-epsilon) (cct-epsilon). [source:swissprot;acc:p48643]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 163.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 168.359\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.119\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1262\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent keratin associated protein 9.2. [source:refseq;acc:nm\_031961]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.353\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 224.678\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02428\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent probable dimethyladenosine transferase (ec 2.1.1.-) (s- adenosylmethionine-6-n',n'-adenosyl(rrna) dimethyltransferase) (18s rrna dimethylase). [source:swissprot;acc:q9unq2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 226.347\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 221.259\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.088\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1263\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent mitogen-activated protein kinase 12 (ec 2.7.1.37) (extracellular signal-regulated kinase 6) (erk-6) (erk5) (stress-activated protein kinase-3) (mitogen-activated protein kinase p38 gamma) (map kinase p38 gamma). [source:swissprot;acc:p53778]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 171.231\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 167.177\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02425\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent putative phosphoglycerate mutase 3 (ec 5.4.2.1) (ec 5.4.2.4) (ec 3.1.3.13). [source:swissprot;acc:q8n0y7]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 212.724\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 207.637\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 5.087\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1264\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent phosphoglycerate mutase 1 (ec 5.4.2.1) (ec 5.4.2.4) (ec 3.1.3.13) (phosphoglycerate mutase isozyme b) (pgam-b) (bpg-dependent pgam 1). [source:swissprot;acc:p18669]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sphingosine kinase 1 (ec 2.7.1.-) (sk 1) (spk 1). [source:swissprot;acc:q9nya1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 171.231\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 167.177\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02425\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1265\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phosphoglycerate mutase 2 (ec 5.4.2.1) (ec 5.4.2.4) (ec 3.1.3.13) (phosphoglycerate mutase isozyme m) (pgam-m) (bpg-dependent pgam 2) (muscle-specific phosphoglycerate mutase). [source:swissprot;acc:p15259]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 212.724\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 207.637\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.087\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/