Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Value Type description Interaction Map Network Comparison Type Rank red Gene Filtered green network_comparison
Results: HTML CSV LaTeX Showing element 1336 to 1385 of 3228 in total 
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein hox-c9 (hox-3b). [source:swissprot;acc:p31274]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
576\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6739.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7644.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.13426\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein hox-d4 (hox-4b) (hox-5.1) (hho.c13). [source:swissprot;acc:p09016]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
341\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
20446.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
24136.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.18049\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein hox-d9 (hox-4c) (hox-5.2). [source:swissprot;acc:p28356]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
591\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6740.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7644.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.13415\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein meis1. [source:swissprot;acc:o00470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2469\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7765.3\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
8004\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03074\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein meis2 (meis1-related protein 1). [source:swissprot;acc:o14770]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2470\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein meis3 (meis1-related protein 2) (fragment). [source:swissprot;acc:q99687]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2474\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein nkx-6.1. [source:swissprot;acc:p78426]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2859\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein otx1. [source:swissprot;acc:p32242]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2399\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5691.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5913.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03915\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein otx2. [source:swissprot;acc:p32243]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2395\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5682\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5905.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03926\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein prh (hematopoietically expressed homeobox) (homeobox protein hex). [source:swissprot;acc:q03014]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2454\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8751.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8480.03\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03196\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein six1 (sine oculis homeobox homolog 1). [source:swissprot;acc:q15475]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1704\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5778.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6176.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06883\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homeobox protein six2 (sine oculis homeobox homolog 2). [source:swissprot;acc:q9npc8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1709\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5775.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6171.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06861\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homer, neuronal immediate early gene, 1b. [source:refseq;acc:nm\_004272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
245\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4251.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5212.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.22595\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homer, neuronal immediate early gene, 2; homer homolog 3 (drosophila). [source:refseq;acc:nm\_004839]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
243\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4246.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5208.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.22652\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homer, neuronal immediate early gene, 3. [source:refseq;acc:nm\_004838]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
246\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4252.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5213.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.22583\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein (methyl methanesulfonate (mmf)-inducible fragment protein 1). [source:swissprot;acc:q15011]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3196\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
homogentisate 1,2-dioxygenase (ec 1.13.11.5) (homogentisicase) (homogentisate oxygenase) (homogentisic acid oxidase). [source:swissprot;acc:q93099]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3053\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
homolog of yeast maf1. [source:refseq;acc:nm\_032272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1097\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6133.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6690.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0907\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hormone sensitive lipase (ec 3.1.1.-) (hsl). [source:swissprot;acc:q05469]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3172\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hpaii tiny  fragments locus 9c. [source:refseq;acc:nm\_022727]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2746\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4188.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4194.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00137\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hrd1 protein isoform a; synoviolin1. [source:refseq;acc:nm\_032431]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1812\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5514.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5871.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06482\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hsgcn1 (fragment). [source:sptrembl;acc:q99736]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1424\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5628.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6063.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0773\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hskin17 protein. [source:refseq;acc:nm\_012311]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1092\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5791.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6316.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09075\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hsp90 co-chaperone cdc37 (hsp90 chaperone protein kinase-targeting subunit) (p50cdc37). [source:swissprot;acc:q16543]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1922\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5567.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5914.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06226\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
human immunodeficiency virus type i enhancer binding protein 3. [source:refseq;acc:nm\_024503]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
694\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7725.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
8647.74\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.11943\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
human immunodeficiency virus type i enhancer-binding protein 2 (hiv-ep2). [source:swissprot;acc:p31629]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
696\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
huntingtin interacting protein 1 (hip-i). [source:swissprot;acc:o00291]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1250\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
10733.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9902.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0839\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
huntingtin interacting protein 1 related (hip1-related) (hip 12). [source:swissprot;acc:o75146]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1256\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
10719\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9891.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0837\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
huntingtin interacting protein c. [source:refseq;acc:nm\_012272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
114\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4300.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5807.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.35048\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
huntingtin interacting protein e; huntingtin interactor protein e. [source:refseq;acc:nm\_007076]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2715\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5332.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5351.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00351\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
huntingtin-associated protein-interacting protein (duo protein). [source:swissprot;acc:o60229]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
813\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5641.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6255.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.109\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
huntingtin-interacting protein hypa/fbp11 (fragment). [source:sptrembl;acc:o75404]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
94\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4247.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5941.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.39879\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hurpin (hacat uv-repressible serpin) (protease inhibitor 13) (headpin) (serpin b13). [source:swissprot;acc:q9uiv8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1689\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5767.69\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6165.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06904\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hus1 checkpoint protein; hus1 (s. pombe) checkpoint homolog; hus1+-like protein. [source:refseq;acc:nm\_004507]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2107\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6916.14\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7295.24\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.05481\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
hyaluronan binding protein 4; intracellular antigen detected by monoclonal antibody ki-1; intracellular hyaluronan-binding protein; chromodomain helicase dna binding protein 3 interacting protein. [source:refseq;acc:nm\_014282]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2108\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hyaluronan synthase 1 (ec 2.4.1.212) (hyaluronate synthase 1) (hyaluronic acid synthase 1) (ha synthase 1) (huhas1). [source:swissprot;acc:q92839]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2012\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5391.27\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5706.64\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0585\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
hyaluronan synthase 2 (ec 2.4.1.212) (hyaluronate synthase 2) (hyaluronic acid synthase 2) (ha synthase 2). [source:swissprot;acc:q92819]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2011\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
hyaluronan synthase 3 (ec 2.4.1.212) (hyaluronate synthase 3) (hyaluronic acid synthase 3) (ha synthase 3). [source:swissprot;acc:o00219]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2013\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hydroxyacid oxidase 1 (ec 1.1.3.15) (haox1) (glycolate oxidase) (gox). [source:swissprot;acc:q9ujm8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2168\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4561.75\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4799.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05206\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hydroxyacid oxidase 2 (ec 1.1.3.15) (haox2) ((s)-2-hydroxy-acid oxidase, peroxisomal) (long chain alpha-hydroxy acid oxidase) (long- chain l-2-hydroxy acid oxidase). [source:swissprot;acc:q9nyq3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2382\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4457.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4642.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04153\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hydroxyacylglutathione hydrolase (ec 3.1.2.6) (glyoxalase ii) (glx ii). [source:swissprot;acc:q16775]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2398\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6707.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6970.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03918\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hydroxyindole o-methyltransferase (ec 2.1.1.4) (hiomt) (acetylserotonin o-methyltransferase) (asmt). [source:swissprot;acc:p46597]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1919\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5444.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5783.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06233\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hydroxymethylglutaryl-coa synthase, cytoplasmic (ec 2.3.3.10) (hmg-coa synthase) (3-hydroxy-3-methylglutaryl coenzyme a synthase). [source:swissprot;acc:q01581]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2303\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6946.6\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7263.68\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04565\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
hydroxymethylglutaryl-coa synthase, mitochondrial precursor (ec 2.3.3.10) (hmg-coa synthase) (3-hydroxy-3-methylglutaryl coenzyme a synthase). [source:swissprot;acc:p54868]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2301\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hyporthetical protein mgc27169. [source:refseq;acc:nm\_176782]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2468\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7765.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8004\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03074\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hypoxanthine-guanine phosphoribosyltransferase (ec 2.4.2.8) (hgprt) (hgprtase). [source:swissprot;acc:p00492]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
420\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
10235.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11830.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.15589\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
hypoxia-inducible factor-3 alpha isoform a; inhibitory pas domain protein. [source:refseq;acc:nm\_152794]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1007\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5707.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6249.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09485\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
i-kappa-b-interacting ras-like protein 2. [source:refseq;acc:nm\_017595]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1197\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5721.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6217.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0867\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
immature colon carcinoma transcript 1 (digestion substraction 1) (ds- 1). [source:swissprot;acc:q14197]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1045\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5364.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5862.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09279\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
immunoglobulin-binding protein 1 (cd79a-binding protein 1) (b cell signal transduction molecule alpha 4) (alpha 4 protein). [source:swissprot;acc:p78318]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1257\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5438.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5893.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0837\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/