Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Value Type description Interaction Map Rank Gene Network Comparison Type Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 1332 to 1381 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-b9 (hox-2e) (hox-2.5). [source:swissprot;acc:p17482]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 574\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7644.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6739.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13428\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c4 (hox-3e) (cp19). [source:swissprot;acc:p09017]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 337\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 24136.4\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 20446.1\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.18049\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c5 (hox-3d) (cp11). [source:swissprot;acc:q00444]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 339\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c6 (hox-3c) (hho.c8) (cp25). [source:swissprot;acc:p09630]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 340\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c9 (hox-3b). [source:swissprot;acc:p31274]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 576\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7644.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6739.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13426\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-d4 (hox-4b) (hox-5.1) (hho.c13). [source:swissprot;acc:p09016]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 341\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 24136.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 20446.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.18049\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-d9 (hox-4c) (hox-5.2). [source:swissprot;acc:p28356]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 591\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7644.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6740.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13415\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein meis1. [source:swissprot;acc:o00470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2469\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 8004\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7765.3\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03074\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein meis2 (meis1-related protein 1). [source:swissprot;acc:o14770]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2470\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein meis3 (meis1-related protein 2) (fragment). [source:swissprot;acc:q99687]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2474\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein nkx-6.1. [source:swissprot;acc:p78426]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2859\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein otx1. [source:swissprot;acc:p32242]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2399\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5913.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5691.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03915\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein otx2. [source:swissprot;acc:p32243]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2395\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5905.08\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5682\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03926\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein prh (hematopoietically expressed homeobox) (homeobox protein hex). [source:swissprot;acc:q03014]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2454\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8480.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8751.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03196\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein six1 (sine oculis homeobox homolog 1). [source:swissprot;acc:q15475]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1704\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6176.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5778.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06883\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein six2 (sine oculis homeobox homolog 2). [source:swissprot;acc:q9npc8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1709\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6171.79\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5775.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06861\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homer, neuronal immediate early gene, 1b. [source:refseq;acc:nm\_004272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 245\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5212.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4251.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22595\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homer, neuronal immediate early gene, 2; homer homolog 3 (drosophila). [source:refseq;acc:nm\_004839]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 243\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5208.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4246.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22652\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homer, neuronal immediate early gene, 3. [source:refseq;acc:nm\_004838]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 246\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5213.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4252.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22583\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein (methyl methanesulfonate (mmf)-inducible fragment protein 1). [source:swissprot;acc:q15011]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3196\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homogentisate 1,2-dioxygenase (ec 1.13.11.5) (homogentisicase) (homogentisate oxygenase) (homogentisic acid oxidase). [source:swissprot;acc:q93099]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3053\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homolog of yeast maf1. [source:refseq;acc:nm\_032272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1097\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6690.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6133.83\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0907\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hormone sensitive lipase (ec 3.1.1.-) (hsl). [source:swissprot;acc:q05469]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3172\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hpaii tiny fragments locus 9c. [source:refseq;acc:nm\_022727]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2746\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4194.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4188.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00137\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hrd1 protein isoform a; synoviolin1. [source:refseq;acc:nm\_032431]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1812\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5871.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5514.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06482\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hsgcn1 (fragment). [source:sptrembl;acc:q99736]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1424\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6063.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5628.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0773\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hskin17 protein. [source:refseq;acc:nm\_012311]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1092\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6316.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5791.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09075\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hsp90 co-chaperone cdc37 (hsp90 chaperone protein kinase-targeting subunit) (p50cdc37). [source:swissprot;acc:q16543]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1922\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5914.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5567.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06226\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent human immunodeficiency virus type i enhancer binding protein 3. [source:refseq;acc:nm\_024503]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 694\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 8647.74\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7725.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.11943\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent human immunodeficiency virus type i enhancer-binding protein 2 (hiv-ep2). [source:swissprot;acc:p31629]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 696\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent huntingtin interacting protein 1 (hip-i). [source:swissprot;acc:o00291]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1250\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 9902.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 10733.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0839\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent huntingtin interacting protein 1 related (hip1-related) (hip 12). [source:swissprot;acc:o75146]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1256\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 9891.08\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 10719\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0837\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent huntingtin interacting protein c. [source:refseq;acc:nm\_012272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 114\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5807.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4300.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.35048\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent huntingtin interacting protein e; huntingtin interactor protein e. [source:refseq;acc:nm\_007076]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2715\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5351.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5332.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00351\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent huntingtin-associated protein-interacting protein (duo protein). [source:swissprot;acc:o60229]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 813\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6255.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5641.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.109\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent huntingtin-interacting protein hypa/fbp11 (fragment). [source:sptrembl;acc:o75404]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 94\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5941.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4247.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.39879\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hurpin (hacat uv-repressible serpin) (protease inhibitor 13) (headpin) (serpin b13). [source:swissprot;acc:q9uiv8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1689\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6165.87\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5767.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06904\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hus1 checkpoint protein; hus1 (s. pombe) checkpoint homolog; hus1+-like protein. [source:refseq;acc:nm\_004507]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2107\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 7295.24\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6916.14\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05481\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent hyaluronan binding protein 4; intracellular antigen detected by monoclonal antibody ki-1; intracellular hyaluronan-binding protein; chromodomain helicase dna binding protein 3 interacting protein. [source:refseq;acc:nm\_014282]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2108\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hyaluronan synthase 1 (ec 2.4.1.212) (hyaluronate synthase 1) (hyaluronic acid synthase 1) (ha synthase 1) (huhas1). [source:swissprot;acc:q92839]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2012\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5706.64\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5391.27\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0585\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent hyaluronan synthase 2 (ec 2.4.1.212) (hyaluronate synthase 2) (hyaluronic acid synthase 2) (ha synthase 2). [source:swissprot;acc:q92819]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2011\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent hyaluronan synthase 3 (ec 2.4.1.212) (hyaluronate synthase 3) (hyaluronic acid synthase 3) (ha synthase 3). [source:swissprot;acc:o00219]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2013\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hydroxyacid oxidase 1 (ec 1.1.3.15) (haox1) (glycolate oxidase) (gox). [source:swissprot;acc:q9ujm8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2168\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4799.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4561.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05206\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hydroxyacid oxidase 2 (ec 1.1.3.15) (haox2) ((s)-2-hydroxy-acid oxidase, peroxisomal) (long chain alpha-hydroxy acid oxidase) (long- chain l-2-hydroxy acid oxidase). [source:swissprot;acc:q9nyq3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2382\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4642.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4457.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04153\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hydroxyacylglutathione hydrolase (ec 3.1.2.6) (glyoxalase ii) (glx ii). [source:swissprot;acc:q16775]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2398\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6970.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6707.29\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03918\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hydroxyindole o-methyltransferase (ec 2.1.1.4) (hiomt) (acetylserotonin o-methyltransferase) (asmt). [source:swissprot;acc:p46597]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1919\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5783.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5444.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06233\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hydroxymethylglutaryl-coa synthase, cytoplasmic (ec 2.3.3.10) (hmg-coa synthase) (3-hydroxy-3-methylglutaryl coenzyme a synthase). [source:swissprot;acc:q01581]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2303\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 7263.68\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6946.6\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04565\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent hydroxymethylglutaryl-coa synthase, mitochondrial precursor (ec 2.3.3.10) (hmg-coa synthase) (3-hydroxy-3-methylglutaryl coenzyme a synthase). [source:swissprot;acc:p54868]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2301\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hyporthetical protein mgc27169. [source:refseq;acc:nm\_176782]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2468\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8004\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7765.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03074\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hypoxanthine-guanine phosphoribosyltransferase (ec 2.4.2.8) (hgprt) (hgprtase). [source:swissprot;acc:p00492]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 420\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 11830.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 10235.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.15589\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/