Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene Hugo description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1262 to 1311 of 16578 in total 
Value Type: Ranked
Filtered: 1

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\def\wcB{0.11111111111111\textwidth}
\def\wcC{0.11111111111111\textwidth}
\def\wcD{0.11111111111111\textwidth}
\def\wcE{0.11111111111111\textwidth}
\def\wcF{0.11111111111111\textwidth}
\def\wcG{0.11111111111111\textwidth}
\def\wcH{0.11111111111111\textwidth}
\begin{longtable}{|c|c|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Hugo\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Network Comparison Type\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{3}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
316\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
KCNA2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
potassium voltage-gated channel subfamily a member 2 (potassium channel kv1.2) (rbk2) (hbk5) (ngk1) (mk2) (hukiv). [source:swissprot;acc:p16389]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
209.583\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
201.251\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.0414\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MAGEA4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
melanoma-associated antigen 12 (mage-12 antigen) (mage12f). [source:swissprot;acc:p43365]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
22.0168\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
SNRPA1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
u2 small nuclear ribonucleoprotein a' (u2 snrnp-a'). [source:swissprot;acc:p09661]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
202.051\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
193.937\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
8.114\vspace{3pt}}\\\cline{1-3}\cline{5-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
317\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
melanoma-associated antigen 1 (mage-1 antigen) (antigen mz2-e). [source:swissprot;acc:p43355]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
22.0168\vspace{3pt}}\\\cline{3-3}\cline{5-8}
&&\parbox{\wcC}{\vspace{3pt}\noindent
microsomal signal peptidase 18 kda subunit (ec 3.4.-.-) (spase 18 kda subunit) (spc18) (endopeptidase sp18). [source:swissprot;acc:p21378]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
200.213\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
192.103\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
8.11\vspace{3pt}}\\\cline{3-8}
&&\parbox{\wcC}{\vspace{3pt}\noindent
splicing factor 3b subunit 3 (spliceosome associated protein 130) (sap 130) (sf3b130) (pre-mrna splicing factor sf3b 130 kda subunit). [source:swissprot;acc:q15393]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
224.445\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
204.044\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09998\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
KCNA1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
potassium voltage-gated channel subfamily a member 1 (potassium channel kv1.1) (huki) (hbk1). [source:swissprot;acc:q09470]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
209.58\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
201.251\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04139\vspace{3pt}}\\\cline{1-4}\cline{6-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
318\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ba395l14.12 (novel protein similar to small nuclear ribonucleoprotein polypeptide a' (snrpa1)). [source:sptrembl;acc:q9nu36]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
202.05\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
193.94\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
8.11\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
KCNA4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
potassium voltage-gated channel subfamily a member 4 (potassium channel kv1.4) (hk1) (hpcn2) (hbk4) (hukii). [source:swissprot;acc:p22459]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
209.579\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
201.251\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04138\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MAGEA10\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
melanoma-associated antigen 10 (mage-10 antigen). [source:swissprot;acc:p43363]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
22.0168\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MRPL3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
mitochondrial 60s ribosomal protein l3 (l3mt). [source:swissprot;acc:p09001]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&&\parbox{\wcF}{\vspace{3pt}\noindent
242.011\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
266.18\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09987\vspace{3pt}}\\\cline{1-3}\cline{5-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
319\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
HSPB2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
heat-shock protein, beta-2 (hspb2) (dmpk-binding protein) (mkbp). [source:swissprot;acc:q16082]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
212.752\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
204.328\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04123\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MAGEB4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
melanoma-associated antigen b1 (mage-b1 antigen) (mage-xp antigen) (dss-ahc critical interval mage superfamily 10) (dam10). [source:swissprot;acc:p43366]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
22.0168\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MRPL44\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
mitochondrial ribosomal protein l44. [source:refseq;acc:nm\_022915]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
216.283\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
208.173\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
8.11\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RPL19\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l19. [source:swissprot;acc:p14118]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
240.73\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
264.729\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09969\vspace{3pt}}\\\cline{1-3}\cline{6-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
320\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
CDH1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
epithelial-cadherin precursor (e-cadherin) (uvomorulin) (cadherin-1) (cam 120/80). [source:swissprot;acc:p12830]\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent
241.892\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
265.96\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.0995\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MAGED2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
melanoma-associated antigen d2 (mage-d2 antigen) (breast cancer associated gene 1 protein) (bcg-1) (11b6) (hepatocellular carcinoma associated protein jcl-1). [source:swissprot;acc:q9unf1]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
22.0168\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
PHKG2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
phosphorylase b kinase gamma catalytic chain, testis/liver isoform (ec 2.7.1.38) (phk-gamma-t) (phosphorylase kinase gamma subunit 2) (psk-c3). [source:swissprot;acc:p15735]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
217.756\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
226.722\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04117\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
SF3B1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
splicing factor 3b subunit 1 (spliceosome associated protein 155) (sap 155) (sf3b155) (pre-mrna splicing factor sf3b 155 kda subunit). [source:swissprot;acc:o75533]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
202.057\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
193.952\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
8.105\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
321\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
c367g8.3 (novel protein similar to rpl23a (60s ribosomal protein l23a)) (60s ribosomal protein l23a like). [source:sptrembl;acc:q9br02]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
241.892\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
265.959\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09949\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
DYNC1I1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dynein intermediate chain 1, cytosolic (dh ic-1) (cytoplasmic dynein intermediate chain 1). [source:swissprot;acc:o14576]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
209.495\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
201.474\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
8.021\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
SNORD23\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
glioma tumor suppressor candidate region gene 2 protein (p60). [source:swissprot;acc:q9nzm5]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
207.402\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
199.219\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04108\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
TRO\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
trophinin. [source:swissprot;acc:q12816]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
88.2482\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
110.265\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
22.0168\vspace{3pt}}\\\cline{1-4}\cline{6-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
322\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
DNASE2B\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
deoxyribonuclease ii beta isoform 1 precursor; deoxyribonuclease ii beta; endonuclease dlad. [source:refseq;acc:nm\_021233]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
86.7483\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
78.8995\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09948\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
GGPS1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggppsase) (geranylgeranyl diphosphate synthase) [includes: dimethylallyltransferase (ec 2.5.1.1); geranyltranstransferase (ec 2.5.1.10); farnesyltranstransferase (ec 2.5.1.29)]. [source:swissprot;acc:o95749]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
209.518\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
201.554\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
7.964\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
NUDT21\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cleavage and polyadenylation specific factor 5, 25 kd subunit; pre-mrna cleavage factor im (25kd); pre-mrna cleavage factor im, 25kd subunit. [source:refseq;acc:nm\_007006]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
212.262\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
203.991\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04055\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RRM2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ribonucleoside-diphosphate reductase m2 chain (ec 1.17.4.1) (ribonucleotide reductase small chain). [source:swissprot;acc:p31350]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
231.969\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
210.064\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
21.905\vspace{3pt}}\\\cline{1-4}\cline{6-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
323\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l23a. [source:swissprot;acc:p29316]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
241.884\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
265.945\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09947\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
C20orf43\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
protein c20orf43 (hspc164/hspc169) (ad-007) (cda05). [source:swissprot;acc:q9by42]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
200.482\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
208.446\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
7.964\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
ITGB1BP2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
integrin beta-1 binding protein 2 (melusin) (mstp015). [source:swissprot;acc:q9ukp3]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
212.262\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
203.991\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04055\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RPS14\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s14 (pro2640). [source:swissprot;acc:p06366]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
242.238\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
264.11\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcH}{\vspace{3pt}\noindent
21.872\vspace{3pt}}}\\\cline{1-3}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
324\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s18 (ke-3) (ke3). [source:swissprot;acc:p25232]\vspace{3pt}}&&&&&\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RAB3GAP2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rab3 gtpase-activating protein, non-catalytic subunit. [source:refseq;acc:nm\_012414]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
212.262\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
203.991\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04055\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RPS23\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s23. [source:swissprot;acc:p39028]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
243.944\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
268.195\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09941\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
SPSB4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
spry domain-containing socs box protein ssb-4. [source:refseq;acc:nm\_080862]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
219.655\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
211.763\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
7.892\vspace{3pt}}\\\cline{1-3}\cline{6-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
325\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
AFF2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
fragile x mental retardation 2 protein (protein fmr-2) (fmr2p) (ox19 protein) (fragile x e mental retardation syndrome protein). [source:swissprot;acc:p51816]\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent
219.599\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
211.723\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
7.876\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MRPL13\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l13, mitochondrial (l13mt). [source:swissprot;acc:q9byd1]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
241.828\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
263.62\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
21.792\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
MRPS12\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
28s ribosomal protein s12, mitochondrial precursor (mpr-s12) (mt- rps12). [source:swissprot;acc:o15235]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&&\parbox{\wcF}{\vspace{3pt}\noindent
243.944\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
268.195\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09941\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
STT3B\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
source of immunodominant mhc-associated peptides; homolog of yeast stt3 gene. [source:refseq;acc:nm\_178862]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
199.905\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
192.123\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04051\vspace{3pt}}\\\cline{1-4}\cline{6-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
326\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
AFF3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
laf-4 protein (lymphoid nuclear protein related to af4). [source:swissprot;acc:p51826]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
219.598\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
211.722\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
7.876\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
DDOST\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit precursor (ec 2.4.1.119) (oligosaccharyl transferase 48 kda subunit) (ddost 48 kda subunit). [source:swissprot;acc:p39656]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&&\parbox{\wcF}{\vspace{3pt}\noindent
199.343\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
191.59\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04047\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RPL5\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l5. [source:swissprot;acc:p46777]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
241.899\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
265.924\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09932\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RPS16\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s16. [source:swissprot;acc:p17008]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&&\parbox{\wcF}{\vspace{3pt}\noindent
241.828\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
263.62\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
21.792\vspace{3pt}}\\\cline{1-3}\cline{5-8}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
327\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
AFF4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
all1 fused gene from 5q31. [source:refseq;acc:nm\_014423]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
219.598\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
211.722\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
7.876\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
POLR2A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerase ii largest subunit (ec 2.7.7.6) (rpb1). [source:swissprot;acc:p24928]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
243.817\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
267.962\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09903\vspace{3pt}}\\\cline{2-4}\cline{6-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
RPL13A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l13a (23 kda highly basic protein). [source:swissprot;acc:p40429]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
241.83\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
263.615\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
21.785\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
TRAPPC3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
bet3 homolog. [source:swissprot;acc:o43617]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
197.221\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
189.574\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04034\vspace{3pt}}\\\hline
\multirow{3}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
328\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
putative eukaryotic translation initiation factor 1a (eif-1a) (eif- 4c). [source:swissprot;acc:o75642]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
240.801\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
262.34\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
21.539\vspace{3pt}}\\\cline{2-3}\cline{5-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
AFF1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
af-4 protein (proto-oncogene af4) (fel protein). [source:swissprot;acc:p51825]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
219.597\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
211.722\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
7.875\vspace{3pt}}\\\cline{2-8}
&\parbox{\wcB}{\vspace{3pt}\noindent
DDX24\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
atp-dependent rna helicase ddx24 (dead-box protein 24). [source:swissprot;acc:q9gzr7]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
258.437\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
235.183\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09888\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Hugo is the HGNC identifier if it exists

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/