Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 112 to 161 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 112\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u1 small nuclear ribonucleoprotein 70 kda (u1 snrnp 70 kda) (snrnp70) (u1-70k). [source:swissprot;acc:p08621]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4366.44\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5899.76\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.35116\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 113\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent filamin a (alpha-filamin) (filamin 1) (endothelial actin-binding protein) (abp-280) (nonmuscle filamin). [source:swissprot;acc:p21333]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 114\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent huntingtin interacting protein c. [source:refseq;acc:nm\_012272]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4300.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5807.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.35048\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 115\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 21185\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 28492\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.34491\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 116\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 1 (ec 2.7.1.33) (pantothenic acid kinase 1) (hpank1) (hpank). [source:swissprot;acc:q8te04]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 117\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 2, mitochondrial precursor (ec 2.7.1.33) (pantothenic acid kinase 2) (hpank2). [source:swissprot;acc:q9bz23]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 118\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 3 (ec 2.7.1.33) (pantothenic acid kinase 3) (hpank3). [source:swissprot;acc:q9h999]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 119\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial solute carrier protein. [source:refseq;acc:nm\_145305]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 120\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent high-mobility group 20b; sox-like transcriptional factor; swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily e, member 1-related. [source:refseq;acc:nm\_006339]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5136.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6895.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.34247\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 121\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor jun-b. [source:swissprot;acc:p17275]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5579.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7488.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.3422\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 122\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent high-mobility group 20a. [source:refseq;acc:nm\_018200]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5140.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6893.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.34112\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 123\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cysteine endopeptidase aut-like 2 isoform a; autophagy-related cysteine endopeptidase 2; autophagin 2. [source:refseq;acc:nm\_052936]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 24260.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 18172.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33503\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 124\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent microtubule-associated proteins 1a/1b light chain 3b (map1a/map1b lc3 b) (map1a/1b light chain 3 b). [source:swissprot;acc:q9gzq8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 24255.7\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 18168.9\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.33501\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 125\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent microtubule-associated proteins 1a/1b light chain 3a (map1a/map1b lc3 a) (map1a/1b light chain 3 a). [source:swissprot;acc:q9h492]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 126\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cysteine endopeptidase aut-like isoform b. [source:refseq;acc:nm\_178326]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 24250\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 18164.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33499\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 127\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor jun-d. [source:swissprot;acc:p17535]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5638.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7523.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33436\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 128\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent luc7-like 2; cgi-74 protein; cgi-59 protein. [source:refseq;acc:nm\_016019]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4355.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5810.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.3341\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 129\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent luc7-like; sarcoplasmic reticulum protein luc7b1. [source:refseq;acc:nm\_018032]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4358.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5811.49\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33348\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 130\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent forkhead box p4; fork head-related protein like a; winged-helix repressor foxp4. [source:refseq;acc:nm\_138457]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2234.68\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2978.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33287\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 131\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent forkhead box protein p1 (hspc215). [source:swissprot;acc:q9h334]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2234.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2978.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33285\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 132\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent forkhead box protein p3 (zinc finger protein jm2) (scurfin). [source:swissprot;acc:q9bzs1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2236.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2980.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33253\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 133\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gaba(a) receptor-associated protein; gaba(a)-receptor-associated protein. [source:refseq;acc:nm\_007278]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 23421.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 17580.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.33225\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 134\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gaba-a receptor-associated protein. [source:sptrembl;acc:q9by60]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 21785.2\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 16426.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.32626\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 135\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent apg3p; pc3-96 protein. [source:refseq;acc:nm\_022488]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 136\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nuclear transcription factor y subunit gamma (nf-y protein chain c) (nuclear factor yc) (nf-yc) (ccaat-binding transcription factor subunit c) (cbf-c) (transactivator hsm-1/2). [source:swissprot;acc:q13952]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3620.77\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4763.34\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.31556\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 137\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ccaat-binding transcription factor subunit b (cbf-b) (nf-y protein chain a) (nf-ya) (caat-box dna binding protein subunit a). [source:swissprot;acc:p23511]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 138\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kv channel interacting protein 1; vesicle apc-binding protein; a-type potassium channel modulatory protein 1. [source:refseq;acc:nm\_014592]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2755.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2094.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.31555\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 139\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent potassium channel-interacting protein 4 isoform 4; calsenilin-like protein. [source:refseq;acc:nm\_147183]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2759.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2099.49\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.31442\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 140\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kv channel interacting protein 2 isoform 4; a-type potassium channel modulatory protein 2; cardiac voltage gated potassium channel modulatory subunit. [source:refseq;acc:nm\_173193]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2760.28\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2100.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.31425\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 141\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent small nuclear ribonucleoprotein sm d2 (snrnp core protein d2) (sm-d2). [source:swissprot;acc:p43330]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4405.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5782.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.3125\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 142\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent metalloprotease 1; metalloprotease 1 (pitrilysin family). [source:refseq;acc:nm\_014889]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 9276.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7090.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.30832\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 143\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-1,4 mannosyltransferase. [source:refseq;acc:nm\_019109]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 9275.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7089.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.30826\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 144\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sad1/unc-84 protein-like 1. [source:swissprot;acc:o94901]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3349.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4362.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.30231\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 145\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin activating enzyme e1-like protein. [source:refseq;acc:nm\_006395]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 16771.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 12889.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.30122\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 146\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent associated molecule with the sh3 domain of stam (amsh) like protein. [source:refseq;acc:nm\_020799]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 11068\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 8508.5\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.30082\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 147\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative breast adenocarcinoma marker (32kd). [source:refseq;acc:nm\_014453]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 148\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent associated molecule with the sh3 domain of stam. [source:refseq;acc:nm\_006463]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 149\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuroendocrine differentiation factor; comparative gene identification transcript 149. [source:refseq;acc:nm\_016079]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 150\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein hspc134 (protein cda04). [source:swissprot;acc:q9by43]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 151\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sh2 domain containing 3c; novel sh2-containing protein 3; sh2 domain-containing 3c; likely ortholog of mouse cas/hef1-associated signal transducer. [source:refseq;acc:nm\_005489]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4578.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5939.91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.29746\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 152\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma antigen, family d, 4 isoform 1; mage1 protein; mage-e1 protein; maged4 protein. [source:refseq;acc:nm\_030801]\vspace{3pt}}&\multirow{10}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 23693.7\vspace{3pt}}}&\multirow{10}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 18263\vspace{3pt}}}&\multirow{10}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.29736\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 153\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hepatocellular carcinoma-associated protein hca3. [source:refseq;acc:nm\_138703]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 154\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 3 (mage-3 antigen) (antigen mz2-d). [source:swissprot;acc:p43357]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 155\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 11 (mage-11 antigen). [source:swissprot;acc:p43364]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 156\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 2 (mage-2 antigen). [source:swissprot;acc:p43356]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 157\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hepatocellular carcinoma-associated protein hca1. [source:refseq;acc:nm\_020932]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 158\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 6 (mage-6 antigen) (mage3b). [source:swissprot;acc:p43360]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 159\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent necdin. [source:swissprot;acc:q99608]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 160\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen d1 (mage-d1 antigen) (neurotrophin receptor-interacting mage homolog) (pro2292). [source:swissprot;acc:q9y5v3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 161\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen f1 (mage-f1 antigen). [source:swissprot;acc:q9hay2]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/