Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1 to 50 of 7460 in total
Value Type: Measured
Interaction Map: High confidence
\def\wcA{0.125\textwidth} \def\wcB{0.125\textwidth} \def\wcC{0.125\textwidth} \def\wcD{0.125\textwidth} \def\wcE{0.125\textwidth} \def\wcF{0.125\textwidth} \def\wcG{0.125\textwidth} \begin{longtable}{|c|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Filtered\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent ba508n22.1 (hspc025) (fragment). [source:sptrembl;acc:q9hcw5]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 85\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 6410\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 6325\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent mannosyl-oligosaccharide 1,2-alpha-mannosidase ib (ec 3.2.1.113) (processing alpha-1,2-mannosidase ib) (alpha-1,2-mannosidase ib) (mannosidase alpha class 1a member 2). [source:swissprot;acc:o60476]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial 28s ribosomal protein s32 (s32mt) (mrp-s32) (ptd007) (hspc204). [source:swissprot;acc:q9y6g3]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 364\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 36400000\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent rad50-interacting protein 1. [source:refseq;acc:nm\_021930]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 450.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2394.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 5.31521\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 2\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cab2. [source:refseq;acc:nm\_033419]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 174\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 17400000\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 1 (sec7 homolog b2-1). [source:swissprot;acc:q15438]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent lipopolysaccharide-responsive and beige-like anchor protein (cdc4-like protein) (beige-like protein). [source:swissprot;acc:p50851]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 85\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 6410\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 6325\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent rho-related btb domain-containing protein 2 (deleted in breast cancer 2 gene protein) (p83). [source:swissprot;acc:q9byz6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 450.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2394.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 5.31521\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 3\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 2 (arf nucleotide-binding site opener) (arno protein) (arf exchange factor). [source:swissprot;acc:q99418]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 2597.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 698.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.71868\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent nuclear dna-binding protein; small unique nuclear receptor corepressor; c1d dna-binding protein. [source:refseq;acc:nm\_006333]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 23818.1\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 19621.3\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 4196.8\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent pyridoxine 5'-phosphate oxidase. [source:refseq;acc:nm\_018129]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 109\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10900000\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 4\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 4. [source:swissprot;acc:q9uia0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent hbs1-like. [source:refseq;acc:nm\_006620]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 2597.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 698.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.71868\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein hox-c4 (hox-3e) (cp19). [source:swissprot;acc:p09017]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 89\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8900000\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent small nuclear ribonucleoprotein e (snrnp-e) (sm protein e) (sm-e) (sme). [source:swissprot;acc:p08578]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 18704\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 21730\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3026\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 5\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent histone h4. [source:swissprot;acc:p02304]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 21773.1\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 24446.3\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 2673.2\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein hox-c6 (hox-3c) (hho.c8) (cp25). [source:swissprot;acc:p09630]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 89\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8900000\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent junctophilin 3 (junctophilin type 3) (jp-3). [source:swissprot;acc:q8wxh2]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 6\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein hox-a4 (hox-1d) (hox-1.4). [source:swissprot;acc:q00056]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 89\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8900000\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent junctophilin 2 (junctophilin type 2) (jp-2). [source:swissprot;acc:q9br39]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm\_016172]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 44490.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 36927.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7563\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent similar to zinc finger protein 277. [source:sptrembl;acc:q8wwa6]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 13174.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 15605.1\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 2430.4\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 7\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 21185\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 28492\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7307\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent sedlin. [source:swissprot;acc:o14582]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 43\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 4300000\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent sphingomyelin phosphodiesterase 2 (ec 3.1.4.12) (neutral sphingomyelinase) (nsmase) (n-smase) (lyso-platelet activating factor- phospholipase c) (lyso-paf-plc). [source:swissprot;acc:o60906]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 277. [source:swissprot;acc:q9nrm2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 13174.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 15605.1\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 2430.4\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 8\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent db83 protein. [source:swissprot;acc:p57088]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent nucleoporin nup43 (p42). [source:swissprot;acc:q8nfh3]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5106.93\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 7500.75\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 2393.82\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 1 (ec 2.7.1.33) (pantothenic acid kinase 1) (hpank1) (hpank). [source:swissprot;acc:q8te04]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 21185\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 28492\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7307\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent synbindin (trs23 homolog) (hematopoietic stem/progenitor cell protein 172) (hspc172) (ptd009) (cgi-104). [source:swissprot;acc:q9y296]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 43\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 4300000\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 9\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent ataxin 2; olivopontocerebellar ataxia 2, autosomal dominant. [source:refseq;acc:nm\_002973]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 12478\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 14756\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 2278\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent ba508n22.1 (hspc025) (fragment). [source:sptrembl;acc:q9hcw5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 85\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 6410\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 75.4118\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 2, mitochondrial precursor (ec 2.7.1.33) (pantothenic acid kinase 2) (hpank2). [source:swissprot;acc:q9bz23]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 21185\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 28492\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7307\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent tob2 protein (transducer of erbb-2 2). [source:swissprot;acc:q14106]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 398.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1281.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.21581\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 10\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent lipopolysaccharide-responsive and beige-like anchor protein (cdc4-like protein) (beige-like protein). [source:swissprot;acc:p50851]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 85\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 6410\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 75.4118\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent myosin va (myosin 5a) (dilute myosin heavy chain, non-muscle) (myosin heavy chain 12) (myoxin). [source:swissprot;acc:q9y4i1]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 7830.62\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 6193.07\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1637.55\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 3 (ec 2.7.1.33) (pantothenic acid kinase 3) (hpank3). [source:swissprot;acc:q9h999]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 21185\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 28492\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7307\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent tob1 protein (transducer of erbb-2 1). [source:swissprot;acc:p50616]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 398.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1281.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.21581\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 11\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cysteine endopeptidase aut-like 2 isoform a; autophagy-related cysteine endopeptidase 2; autophagin 2. [source:refseq;acc:nm\_052936]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5734.28\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 7252.02\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1517.74\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent dab2 interacting protein; ngap-like protein; doc-2/dab2 interactive protein. [source:refseq;acc:nm\_032552]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 398.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1281.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.21581\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial solute carrier protein. [source:refseq;acc:nm\_145305]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 21185\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 28492\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7307\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent serpin b12. [source:swissprot;acc:q96p63]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 199.549\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.56738\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 35.8425\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 12\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cysteine endopeptidase aut-like isoform b. [source:refseq;acc:nm\_178326]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 5629.62\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 7099.51\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1469.89\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytoplasmic polyadenylation element binding protein 4. [source:refseq;acc:nm\_030627]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 398.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1281.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.21581\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent hurpin (hacat uv-repressible serpin) (protease inhibitor 13) (headpin) (serpin b13). [source:swissprot;acc:q9uiv8]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 199.249\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 5.71669\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 34.8539\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent nuclear dna-binding protein; small unique nuclear receptor corepressor; c1d dna-binding protein. [source:refseq;acc:nm\_006333]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 34190.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 40795.8\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 6604.9\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 13\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent adp-ribosylation factor gtpase-activating protein 3 (arf gap 3). [source:swissprot;acc:q9np61]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1363\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 47\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent 29\vspace{3pt}}\\\cline{3-3}\cline{7-7} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&&&\parbox{\wcG}{\vspace{3pt}\noindent 1316\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/