Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Gene Value Type Rank red green description Network Comparison Type Interaction Map network_comparison Filtered
Results: HTML CSV LaTeX Showing element 1 to 50 of 3228 in total 
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
10\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm\_016172]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2.4\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
15\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
28\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
mannosyl-oligosaccharide 1,2-alpha-mannosidase ib (ec 3.2.1.113) (processing alpha-1,2-mannosidase ib) (alpha-1,2-mannosidase ib) (mannosidase alpha class 1a member 2). [source:swissprot;acc:o60476]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.86667\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
3\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
cytohesin 1 (sec7 homolog b2-1). [source:swissprot;acc:q15438]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
4\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
cytohesin 2 (arf nucleotide-binding site opener) (arno protein) (arf exchange factor). [source:swissprot;acc:q99418]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
5\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
cytohesin 4. [source:swissprot;acc:q9uia0]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
6\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
7\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
215\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
322\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.49767\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
8\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
hbs1-like. [source:refseq;acc:nm\_006620]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
9\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
212\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
309\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
xpa binding protein 1; mbd2 interactor protein; putative atp(gtp)-binding protein. [source:refseq;acc:nm\_007266]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.45755\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
10\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
protein x 0004. [source:refseq;acc:nm\_016301]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
11\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
337\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
232\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
rad50-interacting protein 1. [source:refseq;acc:nm\_021930]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.45259\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
12\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
rho-related btb domain-containing protein 2 (deleted in breast cancer 2 gene protein) (p83). [source:swissprot;acc:q9byz6]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
13\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
288.754\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
212.554\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
protein cgi-126 (protein hspc155). [source:swissprot;acc:q9y3c8]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.3585\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
14\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
56.6768\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
75.3531\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
cysteine endopeptidase aut-like 2 isoform a; autophagy-related cysteine endopeptidase 2; autophagin 2. [source:refseq;acc:nm\_052936]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.32952\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
15\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
56.7244\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
75.3948\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
microtubule-associated proteins 1a/1b light chain 3b (map1a/map1b lc3 b) (map1a/1b light chain 3 b). [source:swissprot;acc:q9gzq8]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.32914\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
16\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
56.7252\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
75.3954\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
microtubule-associated proteins 1a/1b light chain 3a (map1a/map1b lc3 a) (map1a/1b light chain 3 a). [source:swissprot;acc:q9h492]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.32913\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
17\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
56.7841\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
75.447\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
cysteine endopeptidase aut-like isoform b. [source:refseq;acc:nm\_178326]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.32866\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
18\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
185.678\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
245.247\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
1,4-alpha-glucan branching enzyme (ec 2.4.1.18) (glycogen branching enzyme) (brancher enzyme). [source:swissprot;acc:q04446]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.32082\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
19\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
glycogen phosphorylase, brain form (ec 2.4.1.1). [source:swissprot;acc:p11216]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
20\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
glycogen phosphorylase, liver form (ec 2.4.1.1). [source:swissprot;acc:p06737]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
21\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
myosin xv (unconventional myosin-15). [source:swissprot;acc:q9ukn7]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
22\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
glycogen phosphorylase, muscle form (ec 2.4.1.1) (myophosphorylase). [source:swissprot;acc:p11217]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
23\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
58\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
44\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.31818\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
24\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
pantothenate kinase 1 (ec 2.7.1.33) (pantothenic acid kinase 1) (hpank1) (hpank). [source:swissprot;acc:q8te04]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
25\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
pantothenate kinase 2, mitochondrial precursor (ec 2.7.1.33) (pantothenic acid kinase 2) (hpank2). [source:swissprot;acc:q9bz23]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
26\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
pantothenate kinase 3 (ec 2.7.1.33) (pantothenic acid kinase 3) (hpank3). [source:swissprot;acc:q9h999]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
27\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
mitochondrial solute carrier protein. [source:refseq;acc:nm\_145305]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
28\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
201.949\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
153.671\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
cyclic-amp-dependent transcription factor atf-3 (activating transcription factor 3). [source:swissprot;acc:p18847]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.31416\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
29\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
187.458\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
243.678\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
uncharacterized hematopoietic stem/progenitor cells protein mds026. [source:sptrembl;acc:q9nz48]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.29991\vspace{3pt}}}\\\cline{1-2}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
30\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
187.457\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, alpha isoform (pp2a, subunit b, b-alpha isoform) (pp2a, subunit b, b55-alpha isoform) (pp2a, subunit b, pr55-alpha isoform) (pp2a, subunit b, r2-alpha isoform). [source:swissprot;acc:q00007]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
31\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
187.458\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
243.677\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, beta isoform (pp2a, subunit b, b-beta isoform) (pp2a, subunit b, b55- beta isoform) (pp2a, subunit b, pr55-beta isoform) (pp2a, subunit b, r2-beta isoform). [source:swissprot;acc:q00005]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.2999\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
32\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
187.462\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
243.673\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, gamma isoform (pp2a, subunit b, b-gamma isoform) (pp2a, subunit b, b55-gamma isoform) (pp2a, subunit b, pr55-gamma isoform) (pp2a, subunit b, r2-gamma isoform) (imypno1). [source:swissprot;acc:q9y2t4]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.29985\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
33\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
188.688\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
242.742\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, beta isoform (pp2a, subunit a, pr65-beta isoform) (pp2a, subunit a, r1-beta isoform). [source:swissprot;acc:p30154]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.28647\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
34\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
189.07\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
242.453\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, alpha isoform (pp2a, subunit a, pr65-alpha isoform) (pp2a, subunit a, r1-alpha isoform) (medium tumor antigen-associated 61 kda protein). [source:swissprot;acc:p30153]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.28235\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
35\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
260.532\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
204.309\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
nuclear transcription factor y subunit gamma (nf-y protein chain c) (nuclear factor yc) (nf-yc) (ccaat-binding transcription factor subunit c) (cbf-c) (transactivator hsm-1/2). [source:swissprot;acc:q13952]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.27519\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
36\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
ccaat-binding transcription factor subunit b (cbf-b) (nf-y protein chain a) (nf-ya) (caat-box dna binding protein subunit a). [source:swissprot;acc:p23511]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
37\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
322\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
253\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
protein phosphatase 1, regulatory (inhibitor) subunit 14a; 17-kda pkc-potentiated inhibitory protein of pp1. [source:refseq;acc:nm\_033256]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.27273\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
38\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
microfibril-associated glycoprotein 4 precursor. [source:swissprot;acc:p55083]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
39\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
protein phosphatase 1, regulatory subunit 14d; pkc-dependent pp1 inhibitory protein. [source:refseq;acc:nm\_017726]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
40\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
ficolin 2 precursor (collagen/fibrinogen domain-containing protein 2) (ficolin-b) (ficolin b) (serum lectin p35) (ebp-37) (hucolin) (l- ficolin). [source:swissprot;acc:q15485]\vspace{3pt}}&\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
41\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
protein phosphatase 1, regulatory (inhibitor) subunit 14c; serologically defined breast cancer antigen ny-br-81; pkc-potentiated pp1 inhibitory protein. [source:refseq;acc:nm\_030949]\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
42\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
204.641\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
160.957\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
proto-oncogene protein c-fos (cellular oncogene fos) (g0/g1 switch regulatory protein 7). [source:swissprot;acc:p01100]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.2714\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
43\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
jun dimerization protein. [source:refseq;acc:nm\_130469]\vspace{3pt}}&\\\cline{1-1}\cline{3-5}
\parbox{\wcA}{\vspace{3pt}\noindent
44\vspace{3pt}}&&\parbox{\wcC}{\vspace{3pt}\noindent
161.046\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
fos-related antigen 2. [source:swissprot;acc:p15408]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.2707\vspace{3pt}}\\\cline{1-1}\cline{3-5}
\parbox{\wcA}{\vspace{3pt}\noindent
45\vspace{3pt}}&&\parbox{\wcC}{\vspace{3pt}\noindent
161.051\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
protein fosb (g0/g1 switch regulatory protein 3). [source:swissprot;acc:p53539]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.27066\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
46\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
204.642\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
161.068\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
fos-related antigen 1 (fra-1). [source:swissprot;acc:p15407]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.27053\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
47\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
325.586\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
256.492\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
gbp protein isoform a. [source:refseq;acc:nm\_017870]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.26938\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
48\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
65.4586\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
83.0461\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
gaba(a) receptor-associated protein; gaba(a)-receptor-associated protein. [source:refseq;acc:nm\_007278]\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.26868\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
49\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
133\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
105\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
beta-arrestin 2 (arrestin, beta 2). [source:swissprot;acc:p32121]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.26667\vspace{3pt}}}\\\cline{1-1}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
50\vspace{3pt}}&&&\parbox{\wcD}{\vspace{3pt}\noindent
beta-arrestin 1 (arrestin, beta 1). [source:swissprot;acc:p49407]\vspace{3pt}}&\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/