Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Gene Rank Network Comparison Type Value Type description Interaction Map Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 451 to 500 of 6456 in total 
Value Type: Ranked
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Network Comparison Type\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
226\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cartilage oligomeric matrix protein precursor (comp). [source:swissprot;acc:p49747]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
269.238\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
239.991\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12187\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
protein transport protein sec61 alpha subunit isoform 1 (sec61 alpha- 1). [source:swissprot;acc:p38378]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
266.673\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
242.153\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.52\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
227\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
thrombospondin 3 precursor. [source:swissprot;acc:p49746]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
269.234\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
239.99\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12186\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
methionine aminopeptidase 1 (ec 3.4.11.18) (metap 1) (map 1) (peptidase m 1). [source:swissprot;acc:p53582]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
268.604\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
244.126\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.478\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
228\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
sh2 domain containing 3c; novel sh2-containing protein 3; sh2 domain-containing 3c; likely ortholog of mouse cas/hef1-associated signal transducer. [source:refseq;acc:nm\_005489]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
202.088\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.411\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12036\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
methionine aminopeptidase 2 (ec 3.4.11.18) (metap 2) (peptidase m 2) (initiation factor 2 associated 67 kda glycoprotein) (p67) (p67eif2). [source:swissprot;acc:p50579]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
268.604\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
244.126\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.478\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
229\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
breast cancer antiestrogen resistance 3. [source:refseq;acc:nm\_003567]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
202.094\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.401\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12028\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l3-like. [source:swissprot;acc:q92901]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
266.663\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
242.195\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.468\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
230\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cysteine-rich protein 1 (crp1) (crp). [source:swissprot;acc:p21291]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.915\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
239.35\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11934\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
protein translation factor sui1 homolog (sui1iso1). [source:swissprot;acc:p41567]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.017\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
242.694\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.323\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
231\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
likely ortholog of mouse shc sh2-domain binding protein 1. [source:refseq;acc:nm\_024745]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.881\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
239.336\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11927\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
sh2 domain containing 3c; novel sh2-containing protein 3; sh2 domain-containing 3c; likely ortholog of mouse cas/hef1-associated signal transducer. [source:refseq;acc:nm\_005489]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
202.088\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.411\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.323\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
232\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
smooth muscle cell lim protein (cysteine-rich protein 2) (crp2) (lim-only protein 5). [source:swissprot;acc:q16527]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.879\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
239.336\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11926\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
breast cancer antiestrogen resistance 3. [source:refseq;acc:nm\_003567]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
202.094\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.401\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.307\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
233\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
lim domain protein, cardiac (muscle lim protein) (cysteine-rich protein 3) (crp3). [source:swissprot;acc:p50461]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.842\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
239.32\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11918\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l7. [source:swissprot;acc:p18124]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
259.984\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
235.727\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.257\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
234\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
chromatin accessibility complex protein 1 (chrac-1) (chrac-15) (huchrac15) (dna polymerase epsilon subunit p15). [source:swissprot;acc:q9nrg0]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
256.835\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
287.41\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11905\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s23. [source:swissprot;acc:p39028]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
268.195\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
243.944\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.251\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
235\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
phenylalanine-4-hydroxylase (ec 1.14.16.1) (pah) (phe-4- monooxygenase). [source:swissprot;acc:p00439]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
28s ribosomal protein s12, mitochondrial precursor (mpr-s12) (mt- rps12). [source:swissprot;acc:o15235]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
268.195\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
243.944\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.251\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
236\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
pp3111 protein. [source:refseq;acc:nm\_022156]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
histone acetyltransferase type b subunit 2 (retinoblastoma binding protein p46) (retinoblastoma-binding protein 7) (rbbp-7). [source:swissprot;acc:q16576]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
228.42\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.644\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.224\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
237\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
syntaxin 18. [source:swissprot;acc:q9p2w9]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
mitochondrial 60s ribosomal protein l3 (l3mt). [source:swissprot;acc:p09001]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
266.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
242.011\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.169\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
238\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rd protein. [source:swissprot;acc:p18615]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
metastasis-associated protein mta1. [source:swissprot;acc:q13330]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
228.356\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.512\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.156\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
239\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
glutathione transferase omega 1 (ec 2.5.1.18) (gsto 1-1). [source:swissprot;acc:p78417]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerase ii largest subunit (ec 2.7.7.6) (rpb1). [source:swissprot;acc:p24928]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.962\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
243.817\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.145\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
240\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
androgen-induced 1; cgi-103 protein; androgen induced protein. [source:refseq;acc:nm\_016108]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
chromatin assembly factor 1 subunit c (caf-1 subunit c) (chromatin assembly factor i p48 subunit) (caf-i 48 kda subunit) (caf-ip48) (retinoblastoma binding protein p48) (retinoblastoma-binding protein 4) (rbbp-4) (msi1 protein homolog). [source:swissprot;acc:q09028]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
228.297\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.39\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.093\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
241\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
atp synthase b chain, mitochondrial precursor (ec 3.6.3.14). [source:swissprot;acc:p24539]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
epithelial-cadherin precursor (e-cadherin) (uvomorulin) (cadherin-1) (cam 120/80). [source:swissprot;acc:p12830]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
265.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
241.892\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.068\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
242\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
j domain containing protein 1. [source:swissprot;acc:q9ukb3]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
c367g8.3 (novel protein similar to rpl23a (60s ribosomal protein l23a)) (60s ribosomal protein l23a like). [source:sptrembl;acc:q9br02]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
265.959\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
241.892\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.067\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
243\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
sorting nexin 13 (rgs domain- and phox domain-containing protein) (rgs-px1). [source:swissprot;acc:q9y5w8]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l23a. [source:swissprot;acc:p29316]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
265.945\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
241.884\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.061\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
244\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ba127l20.1 (novel glutathione-s-transferase). [source:sptrembl;acc:q9h4y5]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l5. [source:swissprot;acc:p46777]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
265.924\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
241.899\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24.025\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
245\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
small nuclear ribonucleoprotein sm d3 (snrnp core protein d3) (sm-d3). [source:swissprot;acc:p43331]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
202.333\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.109\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11751\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l19. [source:swissprot;acc:p14118]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
264.729\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
240.73\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
23.999\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
246\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 4 gamma, 3. [source:refseq;acc:nm\_003760]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.363\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
237.312\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11748\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l12 like protein. [source:sptrembl;acc:o60886]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.528\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
243.583\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
23.945\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
247\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rna-binding protein. [source:refseq;acc:nm\_019027]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l12. [source:swissprot;acc:p30050]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.527\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
243.583\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
23.944\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
248\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
apobec-1 complementation factor isoform 1; apobec-1 stimulating protein; apo-b rna editing protein. [source:refseq;acc:nm\_014576]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dj999l4.1 (novel protein similar to ribosomal protein l12 (rpl12)). [source:sptrembl;acc:q9nq02]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
267.527\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
243.583\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
23.944\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
249\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ns1-associated protein 1. [source:refseq;acc:nm\_006372]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
small nuclear ribonucleoprotein sm d3 (snrnp core protein d3) (sm-d3). [source:swissprot;acc:p43331]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
202.333\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.109\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
23.776\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
250\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein r (hnrnp r). [source:swissprot;acc:o43390]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
pallidin; pallid (mouse) homolog, pallidin. [source:refseq;acc:nm\_012388]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
186.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
210.693\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
23.743\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/