Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Filtered Value Type Rank Gene description green Network Comparison Type Interaction Map red network_comparison
Results: HTML CSV LaTeX Showing element 451 to 500 of 38536 in total 
Filtered: 0
Value Type: Measured
Network Comparison Type: Divided

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\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
226\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage stimulation factor, 64 kda subunit (cstf 64 kda subunit) (cf-1 64 kda subunit). [source:swissprot;acc:p33240]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
758.411\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
658.544\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15165\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 33a (zinc finger protein kox31) (ha0946). [source:swissprot;acc:q06730]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1968.69\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.62\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19451\vspace{3pt}}\\\cline{1-3}\cline{5-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
227\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
similar to zinc finger protein 91 (hpf7, htf10) (fragment). [source:sptrembl;acc:q86w65]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1968.91\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2351.86\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1945\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
transcription factor dp-1 (e2f dimerization partner 1) (drtf1- polypeptide-1) (drtf1). [source:swissprot;acc:q14186]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
369.011\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
424.258\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14972\vspace{3pt}}\\\cline{1-3}\cline{5-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
228\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
sh3-containing grb2-like protein 1 (sh3 domain protein 2b) (extra eleven-nineteen leukemia fusion gene) (een) (een fusion partner of mll). [source:swissprot;acc:q99961]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4696.36\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
4089.65\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14835\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 234 (zinc finger protein hzf4) (fragment). [source:swissprot;acc:q14588]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1968.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.77\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1945\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
229\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj718p11.1.2 (novel class ii aminotransferase similar to serine palmotyltransferase (isoform 2)) (fragment). [source:sptrembl;acc:q9ugb5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
368.317\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
320.752\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14829\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 41. [source:swissprot;acc:p51814]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1968.87\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.81\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1945\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
230\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
trans-prenyltransferase; polyprenyl pyrophosphate synthetase. [source:refseq;acc:nm\_014317]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1718.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1498.17\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14713\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 300. [source:swissprot;acc:q96re9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1968.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.86\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1945\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
231\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
alcohol dehydrogenase class iii chi chain (ec 1.1.1.1) (glutathione- dependent formaldehyde dehydrogenase) (ec 1.2.1.1) (fdh). [source:swissprot;acc:p11766]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1759.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2017.91\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14705\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein zfp31 (fragment). [source:sptrembl;acc:q92971]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1968.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.86\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1945\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
232\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l17 (l23). [source:swissprot;acc:p18621]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1906.28\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1663.73\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14579\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 286. [source:swissprot;acc:q9hbt8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.96\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19449\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
233\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
maguk p55 subfamily member 2 (mpp2 protein) (discs, large homolog 2). [source:swissprot;acc:q14168]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
399.534\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
348.823\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14538\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 7 (zinc finger protein kox4) (zinc finger protein hf.16). [source:swissprot;acc:p17097]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.96\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19449\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
234\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
wiskott-aldrich syndrome protein family member 3 (wasp-family protein member 3) (verprolin homology domain-containing protein 3). [source:swissprot;acc:q9upy6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4550.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5202.89\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14333\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 304. [source:swissprot;acc:q9hcx3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.01\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19449\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
235\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
integrin beta-3 precursor (platelet membrane glycoprotein iiia) (gpiiia) (cd61 antigen). [source:swissprot;acc:p05106]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1843.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1612.86\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14326\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 83 (zinc finger protein hpf1). [source:swissprot;acc:p51522]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1968.97\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2351.92\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19449\vspace{3pt}}\\\cline{1-3}\cline{5-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
236\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
f23269\_2. [source:sptrembl;acc:o75290]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.11\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2352.07\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
peroxisomal acyl-coenzyme a thioester hydrolase 2a (ec 3.1.2.2) (peroxisomal long-chain acyl-coa thioesterase 2) (zap128). [source:swissprot;acc:p49753]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3103.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2715.75\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1426\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
237\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj54b20.4 (novel krab box containing c2h2 type zinc finger protein). [source:sptrembl;acc:q96qh7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
p28 ing5. [source:refseq;acc:nm\_032329]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
2243.69\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2551.23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13707\vspace{3pt}}\\\cline{1-3}\cline{5-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
238\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
casein kinase i alpha s-like. [source:refseq;acc:nm\_145203]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1933.94\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2198.47\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13678\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 415. [source:refseq;acc:nm\_018355]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.12\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
239\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
guanine nucleotide-binding protein g(q), alpha subunit. [source:swissprot;acc:p50148]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
434.366\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
382.142\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13666\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 35 (zinc finger protein hf.10). [source:swissprot;acc:p13682]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.27\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
240\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
putative eukaryotic translation initiation factor 1a (eif-1a) (eif- 4c). [source:swissprot;acc:o75642]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1676.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1475.83\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13575\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 10 (zinc finger protein kox1) (fragment). [source:swissprot;acc:p21506]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.16\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
241\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 9.2. [source:refseq;acc:nm\_031961]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1079.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1225.47\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13574\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 225. [source:swissprot;acc:q9uk10]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.16\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
242\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
splicing factor 3b subunit 3 (spliceosome associated protein 130) (sap 130) (sf3b130) (pre-mrna splicing factor sf3b 130 kda subunit). [source:swissprot;acc:q15393]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
642.343\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
729.216\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13524\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 256 (bone marrow zinc finger 3) (bmzf-3). [source:swissprot;acc:q9y2p7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.16\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
243\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 4.3 (fragment). [source:sptrembl;acc:q9byr4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1079.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1225.09\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13502\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 214 (bwscr2 associated zinc-finger protein 1) (baz 1). [source:swissprot;acc:q9ul59]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.19\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.16\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}}\\\cline{1-3}\cline{5-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
244\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj54b20.2 (novel krab box containing c2h2 type zinc finger protein) (fragment). [source:sptrembl;acc:q96qh9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.25\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2352.23\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 2-4; keratin associated protein 2.4. [source:refseq;acc:nm\_033184]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
1079.36\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1225.09\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.13502\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
245\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 1.5. [source:refseq;acc:nm\_031957]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 165 (ld65). [source:swissprot;acc:p49910]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.19\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.16\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}}\\\cline{1-3}\cline{5-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
246\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ba526d8.4 (novel krab box containing c2h2 type zinc finger protein) (fragment). [source:sptrembl;acc:q9h559]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.25\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2352.23\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
keratin, ultra high-sulfur matrix protein a (uhs keratin a) (uhs kera). [source:swissprot;acc:p26371]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1079.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1225.09\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13502\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
247\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj153g14.3 (novel c2h2 type zinc finger protein) (fragment). [source:sptrembl;acc:q9ujn7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.07\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 1-3; keratin associated protein 1.3. [source:refseq;acc:nm\_030966]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1079.36\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1225.09\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13502\vspace{3pt}}\\\cline{1-3}\cline{6-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
248\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 4-10; keratin associated protein 4.10. [source:refseq;acc:nm\_033060]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1079.37\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent
1.135\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 264. [source:swissprot;acc:o43296]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.12\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
249\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 4-14; keratin associated protein 4.14. [source:refseq;acc:nm\_033059]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1079.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1225.08\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.135\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 228. [source:swissprot;acc:q9uju3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19448\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
250\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
keratin associated protein 4.9 (fragment). [source:sptrembl;acc:q9byq8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1079.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1225.08\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.135\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 224. [source:swissprot;acc:q9nzl3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1969.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.49\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.19447\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/