Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Gene Rank Filtered description Network Comparison Type Value Type Interaction Map red network_comparison green
Results: HTML CSV LaTeX Showing element 451 to 500 of 3730 in total 
Network Comparison Type: Divided
Value Type: Ranked
Interaction Map: High confidence

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\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
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\def\wcE{0.14285714285714\textwidth}
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\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Filtered\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
green\vspace{3pt}}\\
\hline
\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
226\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rab gdp dissociation inhibitor alpha (rab gdi alpha) (gdi-1) (xap-4) (oligophrenin 2). [source:swissprot;acc:p31150]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
15395.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10374\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
16992.9\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cartilage oligomeric matrix protein precursor (comp). [source:swissprot;acc:p49747]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.991\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12187\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
269.238\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
227\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tigger transposable element derived 6. [source:refseq;acc:nm\_030953]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12360\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10355\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11200.2\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
thrombospondin 3 precursor. [source:swissprot;acc:p49746]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12186\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
269.234\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
228\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
soluble liver antigen/liver pancreas antigen. [source:refseq;acc:nm\_153825]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10303.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10355\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11370.4\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
sh2 domain containing 3c; novel sh2-containing protein 3; sh2 domain-containing 3c; likely ortholog of mouse cas/hef1-associated signal transducer. [source:refseq;acc:nm\_005489]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.411\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12036\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
202.088\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
229\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
poly (adp-ribose) glycohydrolase. [source:refseq;acc:nm\_003631]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10899.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10339\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9878.1\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
breast cancer antiestrogen resistance 3. [source:refseq;acc:nm\_003567]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.401\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12028\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
202.094\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
230\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tigger transposable element derived 7; jerky (mouse) homolog-like. [source:refseq;acc:nm\_033208]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12364.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10323\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11207.7\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cysteine-rich protein 1 (crp1) (crp). [source:swissprot;acc:p21291]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11934\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
267.915\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
231\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tigger transposable element derived 1; jerky (mouse) homolog-like. [source:refseq;acc:nm\_145702]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12364.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10322\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11207.9\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
likely ortholog of mouse shc sh2-domain binding protein 1. [source:refseq;acc:nm\_024745]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.336\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11927\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
267.881\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
232\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
kynureninase (ec 3.7.1.3) (l-kynurenine hydrolase). [source:swissprot;acc:q16719]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12394.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10271\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11240.2\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
smooth muscle cell lim protein (cysteine-rich protein 2) (crp2) (lim-only protein 5). [source:swissprot;acc:q16527]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.336\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11926\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
267.879\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
233\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s acidic ribosomal protein p1. [source:swissprot;acc:p05386]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9586.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1015\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
10560\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
lim domain protein, cardiac (muscle lim protein) (cysteine-rich protein 3) (crp3). [source:swissprot;acc:p50461]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11918\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
267.842\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
234\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
transcription factor 4 (immunoglobulin transcription factor 2) (itf-2) (sl3-3 enhancer factor 2) (sef-2). [source:swissprot;acc:p15884]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
16614\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10124\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
18296\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
chromatin accessibility complex protein 1 (chrac-1) (chrac-15) (huchrac15) (dna polymerase epsilon subunit p15). [source:swissprot;acc:q9nrg0]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
287.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11905\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
256.835\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
235\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
elongation factor 1-alpha 1 (ef-1-alpha-1) (elongation factor 1 a-1) (eef1a-1) (elongation factor tu) (ef-tu). [source:swissprot;acc:p04720]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
14554.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10123\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
16027.9\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
phenylalanine-4-hydroxylase (ec 1.14.16.1) (pah) (phe-4- monooxygenase). [source:swissprot;acc:p00439]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
236\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
protein phosphatase inhibitor 2 (ipp-2). [source:swissprot;acc:p41236]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
15245.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10122\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
16788.5\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
pp3111 protein. [source:refseq;acc:nm\_022156]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
237\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthethase 2 (paps synthethase 2) (papss 2) (sulfurylase kinase 2) (sk2) (sk 2) [includes: sulfate adenylyltransferase (ec 2.7.7.4) (sulfate adenylate transferase) (sat) (atp-sulfurylase); adenylylsulfate kinase (ec 2.7.1.25) (adenylylsulfate 3'-phosphotransferase) (aps kinase) (adenosine-5'-phosphosulfate 3'-phosphotransferase) (3'- phosphoadenosine-5'-phosphosulfate synthetase)]. [source:swissprot;acc:o95340]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9984\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10114\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9067\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
syntaxin 18. [source:swissprot;acc:q9p2w9]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
238\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cyclin-dependent kinases regulatory subunit 1 (cks-1) (sid1334) (pnas-16 / pnas-143). [source:swissprot;acc:p33551]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12677.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0997\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
13941.7\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rd protein. [source:swissprot;acc:p18615]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
239\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
mto1 protein homolog (cgi-02). [source:swissprot;acc:q9y2z2]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8907.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09969\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9795.36\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
glutathione transferase omega 1 (ec 2.5.1.18) (gsto 1-1). [source:swissprot;acc:p78417]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
240\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
methyltransferase like 2. [source:refseq;acc:nm\_018396]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
17946\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09923\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
16326\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
androgen-induced 1; cgi-103 protein; androgen induced protein. [source:refseq;acc:nm\_016108]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
241\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
secreted modular calcium-binding protein 1. [source:refseq;acc:nm\_022137]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
14003.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09891\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
12743.3\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
atp synthase b chain, mitochondrial precursor (ec 3.6.3.14). [source:swissprot;acc:p24539]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
242\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1,4-alpha-glucan branching enzyme (ec 2.4.1.18) (glycogen branching enzyme) (brancher enzyme). [source:swissprot;acc:q04446]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
15260.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09822\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
13895.8\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
j domain containing protein 1. [source:swissprot;acc:q9ukb3]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
243\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
polyadenylate-binding protein 3 (poly(a)-binding protein 3) (pabp 3) (testis-specific poly(a)-binding protein). [source:swissprot;acc:q9h361]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1251\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09752\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1373\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
sorting nexin 13 (rgs domain- and phox domain-containing protein) (rgs-px1). [source:swissprot;acc:q9y5w8]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
244\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
keratin associated protein 9.2. [source:refseq;acc:nm\_031961]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10551.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09751\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11579.9\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ba127l20.1 (novel glutathione-s-transferase). [source:sptrembl;acc:q9h4y5]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
254.15\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
245\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cell division protein kinase 3 (ec 2.7.1.-). [source:swissprot;acc:q00526]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11867.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09702\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
13019\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
small nuclear ribonucleoprotein sm d3 (snrnp core protein d3) (sm-d3). [source:swissprot;acc:p43331]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.109\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11751\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
202.333\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
246\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
keratin associated protein 4.3 (fragment). [source:sptrembl;acc:q9byr4]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10551.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09687\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11573.7\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 4 gamma, 3. [source:refseq;acc:nm\_003760]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.312\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11748\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
212.363\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
247\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
keratin associated protein 2-4; keratin associated protein 2.4. [source:refseq;acc:nm\_033184]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10551.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09687\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11573.7\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rna-binding protein. [source:refseq;acc:nm\_019027]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
212.41\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
248\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
keratin associated protein 1.5. [source:refseq;acc:nm\_031957]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10551.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09687\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11573.7\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
apobec-1 complementation factor isoform 1; apobec-1 stimulating protein; apo-b rna editing protein. [source:refseq;acc:nm\_014576]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
212.41\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
249\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
keratin, ultra high-sulfur matrix protein a (uhs keratin a) (uhs kera). [source:swissprot;acc:p26371]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10551.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09687\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11573.7\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ns1-associated protein 1. [source:refseq;acc:nm\_006372]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
212.41\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
250\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
keratin associated protein 1-3; keratin associated protein 1.3. [source:refseq;acc:nm\_030966]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10551.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09687\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11573.7\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein r (hnrnp r). [source:swissprot;acc:o43390]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.302\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11719\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
212.41\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/