Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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description Rank Gene Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1051 to 1100 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent fos-related antigen 1 (fra-1). [source:swissprot;acc:p15407]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 46\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.642\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 161.068\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.27053\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fos-related antigen 2. [source:swissprot;acc:p15408]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.641\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 161.046\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.2707\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fragile x mental retardation 1 protein (protein fmr-1) (fmrp). [source:swissprot;acc:q06787]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1828\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 202.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 200.115\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01147\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fragile x mental retardation syndrome related protein 1. [source:swissprot;acc:p51114]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1825\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 202.386\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 200.086\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0115\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent fragile x mental retardation syndrome related protein 2. [source:swissprot;acc:p51116]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1823\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent frg1 protein (fshd region gene 1 protein). [source:swissprot;acc:q14331]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2745\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 201.476\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 201.514\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00019\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fructose-1,6-bisphosphatase (ec 3.1.3.11) (d-fructose-1,6-bisphosphate 1-phosphohydrolase) (fbpase). [source:swissprot;acc:p09467]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2561\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 209.825\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00169\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fructose-1,6-bisphosphatase isozyme 2 (ec 3.1.3.11) (d-fructose-1,6- bisphosphate 1-phosphohydrolase) (fbpase). [source:swissprot;acc:o00757]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2551\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 209.766\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.148\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00182\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fructose-bisphosphate aldolase a (ec 4.1.2.13) (muscle-type aldolase) (lung cancer antigen ny-lu-1). [source:swissprot;acc:p04075]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2907\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent fructose-bisphosphate aldolase b (ec 4.1.2.13) (liver-type aldolase). [source:swissprot;acc:p05062]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2973\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent fructose-bisphosphate aldolase c (ec 4.1.2.13) (brain-type aldolase). [source:swissprot;acc:p09972]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3087\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ftsj homolog 3; likely ortholog of mouse ectoplacental cone, invasive trophoblast giant cells, extraembryonic ectoderm and chorion sequence 3. [source:refseq;acc:nm\_017647]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 726\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 244.495\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 232.419\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05196\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fumarate hydratase, mitochondrial precursor (ec 4.2.1.2) (fumarase). [source:swissprot;acc:p07954]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 731\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 208.874\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.708\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05187\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fuse binding protein 3 (fragment). [source:sptrembl;acc:q92946]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2668\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.176\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 216.944\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00107\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fuse-binding protein-interacting repressor isoform b; siah binding protein 1; pyrimidine tract binding splicing factor; ro ribonucleoprotein-binding protein 1; poly-u binding splicing factor puf60. [source:refseq;acc:nm\_014281]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1864\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 203.071\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 200.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01086\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fused toes homolog; likely ortholog of mouse fused toes. [source:refseq;acc:nm\_022476]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2124\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.248\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.788\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00696\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fyve-finger-containing rab5 effector protein rabenosyn-5. [source:refseq;acc:nm\_022340]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2998\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent fzr1 protein; fizzy-related protein; cdc20-like 1b. [source:refseq;acc:nm\_016263]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 848\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 147.211\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 153.371\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04184\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent g protein-coupled receptor 66. [source:refseq;acc:nm\_006056]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2815\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent g-rich sequence factor-1 (grsf-1). [source:swissprot;acc:q12849]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1855\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.891\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.542\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0109\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent g1 to s phase transition protein 1 homolog (gtp-binding protein gst1-hs). [source:swissprot;acc:p15170]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1631\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.789\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.533\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01511\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent g2/mitotic-specific cyclin b1. [source:swissprot;acc:p14635]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1582\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 168.098\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 170.844\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01634\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent g2/mitotic-specific cyclin b2. [source:swissprot;acc:o95067]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1580\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 168.018\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 170.769\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01637\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ga binding protein alpha chain (gabp-alpha subunit) (transcription factor e4tf1-60) (nuclear respiratory factor-2 subunit alpha). [source:swissprot;acc:q06546]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 883\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 227.596\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 219.017\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03917\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent ga binding protein beta-2 chain (gabp-beta-2 subunit) (transcription factor e4tf1-47) (gapbp-2) (nuclear respiratory factor-2 subunit gamma). [source:swissprot;acc:q06545]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 884\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gaba(a) receptor-associated protein; gaba(a)-receptor-associated protein. [source:refseq;acc:nm\_007278]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 48\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 65.4586\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 83.0461\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.26868\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gaba-a receptor-associated protein. [source:sptrembl;acc:q9by60]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 168\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 82.5916\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 98.0548\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.18722\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent galactose-1-phosphate uridylyltransferase (ec 2.7.7.12) (gal-1-p uridylyltransferase) (udp-glucose--hexose-1-phosphate uridylyltransferase). [source:swissprot;acc:p07902]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1337\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.162\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.412\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02257\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent galectin-4 (lactose-binding lectin 4) (l-36 lactose binding protein) (l36lbp) (antigen ny-co-27). [source:swissprot;acc:p56470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2158\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 206.401\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 207.796\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00676\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent galectin-9 (hom-hd-21) (ecalectin). [source:swissprot;acc:o00182]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2122\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 206.473\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 207.911\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00696\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma adducin (adducin-like protein 70). [source:swissprot;acc:q9uey8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1934\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 224.264\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.055\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00995\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma enolase (ec 4.2.1.11) (2-phospho-d-glycerate hydro-lyase) (neural enolase) (nse) (enolase 2). [source:swissprot;acc:p09104]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2360\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 207.186\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 208.046\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00415\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor alpha-1 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p14867]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 628\vspace{3pt}}&\multirow{9}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 214.256\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 202.14\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05994\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor alpha-2 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p47869]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 621\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor alpha-3 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p34903]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 629\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor alpha-4 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p48169]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 625\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor alpha-6 subunit precursor (gaba(a) receptor). [source:swissprot;acc:q16445]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 622\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor epsilon subunit precursor (gaba(a) receptor). [source:swissprot;acc:p78334]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 626\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor gamma-1 subunit precursor (gaba(a) receptor). [source:swissprot;acc:q8n1c3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 620\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor gamma-2 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p18507]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 623\vspace{3pt}}&&&\\\cline{1-2}\cline{4-4} \parbox{\wcA}{\vspace{3pt}\noindent gamma-aminobutyric-acid receptor gamma-3 subunit precursor (gaba(a) receptor). [source:swissprot;acc:q99928]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 618\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 202.139\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma-butyrobetaine,2-oxoglutarate dioxygenase (ec 1.14.11.1) (gamma-butyrobetaine hydroxylase) (gamma-bbh). [source:swissprot;acc:o75936]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1842\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 212.455\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.113\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01115\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma-interferon inducible lysosomal thiol reductase precursor (gamma-interferon-inducible protein ip-30). [source:swissprot;acc:p13284]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3101\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma-sarcoglycan (gamma-sg) (35 kda dystrophin-associated glycoprotein) (35dag). [source:swissprot;acc:q13326]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1181\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.186\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 212.672\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02593\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma-snap-associated factor 1; rab11-interacting protein. [source:refseq;acc:nm\_015470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1817\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.462\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.926\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01164\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gamma-soluble nsf attachment protein (snap-gamma) (n-ethylmaleimide- sensitive factor attachment protein, gamma). [source:swissprot;acc:q99747]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 166\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 209.299\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 249.187\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.19058\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ganglioside-induced differentiation-associated protein 1-like 1. [source:refseq;acc:nm\_024034]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1139\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 218.484\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 212.675\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.02731\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent ganglioside-induced differentiation-associated protein 1. [source:refseq;acc:nm\_018972]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1141\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gastricsin precursor (ec 3.4.23.3) (pepsinogen c). [source:swissprot;acc:p20142]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2470\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 235.812\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 235.088\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00308\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent gbp protein isoform a. [source:refseq;acc:nm\_017870]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 47\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 325.586\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 256.492\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.26938\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/