Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.
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Filtered description green Value Type Rank Gene network_comparison Interaction Map red Network Comparison Type
Results: HTML CSV LaTeX
Showing element 101 to 150 of 38536 in total
Filtered: 0
Network Comparison Type: Divided

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\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Value Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
red\vspace{3pt}}\\
\hline
\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s26. [source:swissprot;acc:p02383]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
5.24885\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
152\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.67729\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
8.80383\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
5.66499\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.75134\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
9.92134\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
26.7508\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
820\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0023\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
26.6893\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
81.2233\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.85588\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
150.741\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2484.72\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
627\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03073\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
2410.65\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
11262.9\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
524\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05312\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
10694.8\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
17098\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
112\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1982\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
14269.7\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
21304.5\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
728\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02434\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
21823.1\vspace{3pt}}\\\cline{1-5}\cline{7-7}
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s27 (metallopan-stimulin 1) (mps-1). [source:swissprot;acc:p42677]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
27.1942\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
836\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00023\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
27.188\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
30.9731\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
395\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03421\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
32.0326\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1650.32\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
609\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03491\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1594.65\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2378.99\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
444\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02223\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2431.87\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
4228.5\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
705\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03426\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
4088.42\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
6524\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
472\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01255\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
6605.9\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
9936.37\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
380\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0387\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
9566.15\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
10278.1\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
619\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0306\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
9972.93\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s28. [source:swissprot;acc:p25112]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
12.5026\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
285\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08467\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
13.5612\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
19.6324\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
468\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06383\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
18.4544\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
405.367\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
385\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04615\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
387.486\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
879.603\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
304\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19893\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
1054.58\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
936.963\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
550\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05276\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
890.008\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
3503.57\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
790\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00964\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
3470.13\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
11459\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
612\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03359\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
11843.9\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
14193.6\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
258\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09459\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
12967.1\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s29. [source:swissprot;acc:p30054]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
28.6337\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
554\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04577\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
27.3804\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
28.6733\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
265\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0985\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
26.1023\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1895.38\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
297\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10737\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
1711.6\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2217.3\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
356\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12795\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1965.77\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
6326.82\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
305\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19472\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
5295.67\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
9439.12\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
203\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.32724\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
7111.83\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
9997.71\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
225\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10378\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
11035.3\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
10653.8\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
729\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0145\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
10808.3\vspace{3pt}}\\\cline{1-5}\cline{7-7}
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s3a. [source:swissprot;acc:p49241]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
21.5465\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
792\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00597\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
21.4186\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
32.9781\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
404\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03159\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
34.0198\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2069.56\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
439\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08345\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1910.16\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2879.55\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
447\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01735\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
2929.51\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
8550.86\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
473\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01195\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
8653.02\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
10992.4\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
331\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05644\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
10405.1\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
13148.4\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
786\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00719\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
13242.9\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
14964.4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.25308\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
11942.1\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s4, x isoform (single copy abundant mrna protein) (scr10). [source:swissprot;acc:p12750]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
23.34\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
258\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10441\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
21.1334\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
24.652\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
424\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07638\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
22.9027\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1495.22\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
255\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1346\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1317.84\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1653.68\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
416\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09339\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1512.43\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
5253.37\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
273\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.24367\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
4224.07\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
6012.92\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
315\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.16333\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
5168.71\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
11211.6\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
444\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0741\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
12042.4\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
11393.9\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
261\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09259\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
12448.9\vspace{3pt}}\\\cline{1-5}\cline{7-7}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s4, y isoform 2. [source:swissprot;acc:q8td47]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
23.3445\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
257\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10442\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
21.1374\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
24.621\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
423\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07651\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
22.8712\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/