MK5 Microarray Data

Rank	Gene	description	Value Type	Network Comparison Type	Interaction Map	Filtered	red	green	network_comparison

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Showing element 532 to 581 of 12912 in total

Network Comparison Type	Divided
Interaction Map	High confidence
Filtered	1

Rank	description	Value Type	red	green	network_comparison	
133	tob1 protein (transducer of erbb-2 1). [source:swissprot;acc:p50616]	Ranked	350	290	1.2069	
134	dab2 interacting protein; ngap-like protein; doc-2/dab2 interactive protein. [source:refseq;acc:nm_032552]	Ranked	350	290	1.2069	
134	dna polymerase epsilon p12 subunit (dna polymerase epsilon subunit 4). [source:swissprot;acc:q9nr33]	Rooted	44.849	54.7964	1.2218	
134	gaba-a receptor-associated protein. [source:sptrembl;acc:q9by60]	Measured	21785.2	16426.1	1.32626	
134	p66 alpha. [source:refseq;acc:nm_017660]	Squared	81888.8	56306.5	1.45434	
135	20 kda nuclear cap binding protein (ncbp 20 kda subunit) (cbp20) (ncbp interacting protein 1) (nip1). [source:swissprot;acc:p52298]	Rooted	54.935	66.6101	1.21253	
135	apg3p; pc3-96 protein. [source:refseq;acc:nm_022488]	Measured	21785.2	16426.1	1.32626	
135	cytoplasmic polyadenylation element binding protein 4. [source:refseq;acc:nm_030627]	Ranked	350	290	1.2069	
135	transcription repressor p66 beta component of the mecp1 complex. [source:refseq;acc:nm_020699]	Squared	81888.8	56306.5	1.45434	
136	adiponectin receptor 2. [source:refseq;acc:nm_024551]	Rooted	41.8357	50.6469	1.21061	
136	cytoplasmic polyadenylation element binding protein 3. [source:refseq;acc:nm_014912]	Ranked	350	290	1.2069	
136	nuclear transcription factor y subunit gamma (nf-y protein chain c) (nuclear factor yc) (nf-yc) (ccaat-binding transcription factor subunit c) (cbf-c) (transactivator hsm-1/2). [source:swissprot;acc:q13952]	Measured	3620.77	4763.34	1.31556	
136	tyrosine aminotransferase (ec 2.6.1.5) (l-tyrosine:2-oxoglutarate aminotransferase) (tat). [source:swissprot;acc:p17735]	Squared	81888.8	56306.5	1.45434	
137	ccaat-binding transcription factor subunit b (cbf-b) (nf-y protein chain a) (nf-ya) (caat-box dna binding protein subunit a). [source:swissprot;acc:p23511]	Measured	3620.77	4763.34	1.31556	
137	cell division protein kinase 3 (ec 2.7.1.-). [source:swissprot;acc:q00526]	Squared	81606.8	56215.8	1.45167	
137	musashi 2 isoform a. [source:refseq;acc:nm_138962]	Rooted	54.9787	66.2416	1.20486	
137	ras gtpase-activating protein ngap (ras protein activator like 1). [source:swissprot;acc:q9ujf2]	Ranked	350	290	1.2069	
138	kv channel interacting protein 1; vesicle apc-binding protein; a-type potassium channel modulatory protein 1. [source:refseq;acc:nm_014592]	Measured	2755.15	2094.3	1.31555	
138	musashi 1. [source:refseq;acc:nm_002442]	Rooted	54.9787	66.2416	1.20486	
138	putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm_016172]	Squared	468498	322755	1.45156	
138	serine/threonine protein phosphatase 2a, catalytic subunit, alpha isoform (ec 3.1.3.16) (pp2a-alpha) (replication protein c) (rp-c). [source:swissprot;acc:p05323]	Ranked	194.372	234.204	1.20493	
139	amyloid beta a4 precursor protein-binding family a member 1 (neuron- specific x11 protein) (neuronal munc18-1-interacting protein 1) (mint-1) (adapter protein x11alpha). [source:swissprot;acc:q02410]	Ranked	271.752	225.68	1.20415	
139	g2/mitotic-specific cyclin b2. [source:swissprot;acc:o95067]	Squared	81592.1	56211.1	1.45153	
139	nuclear protein ukp68. [source:refseq;acc:nm_024824]	Rooted	54.9787	66.2416	1.20486	
139	potassium channel-interacting protein 4 isoform 4; calsenilin-like protein. [source:refseq;acc:nm_147183]	Measured	2759.61	2099.49	1.31442	
140	cell division protein kinase 2 (ec 2.7.1.-) (p33 protein kinase). [source:swissprot;acc:p24941]	Squared	81527.6	56190.6	1.45091	
140	filamin b, beta (actin binding protein 278); beta filamin; filamin 1 (actin-binding protein-280)-like; filamin b, beta (actin-binding protein-278); filamin b, beta. [source:refseq;acc:nm_001457]	Rooted	55.6161	66.7332	1.19989	
140	kv channel interacting protein 2 isoform 4; a-type potassium channel modulatory protein 2; cardiac voltage gated potassium channel modulatory subunit. [source:refseq;acc:nm_173193]	Measured	2760.28	2100.27	1.31425	
140	ras-related gtp binding a; ras-related gtp-binding protein. [source:refseq;acc:nm_006570]	Ranked	59	49	1.20408	
141	g2/mitotic-specific cyclin b1. [source:swissprot;acc:p14635]	Squared	81520.8	56188.5	1.45084	
141	ras-related gtp binding c; rag c protein. [source:refseq;acc:nm_022157]	Ranked	59	49	1.20408	
141	rev1-like; rev1 protein; rev1 (yeast homolog)- like. [source:refseq;acc:nm_016316]	Rooted	55.6161	66.7332	1.19989	
141	small nuclear ribonucleoprotein sm d2 (snrnp core protein d2) (sm-d2). [source:swissprot;acc:p43330]	Measured	4405.4	5782.08	1.3125	
142	cell division control protein 2 homolog (ec 2.7.1.-) (p34 protein kinase) (cyclin-dependent kinase 1) (cdk1). [source:swissprot;acc:p06493]	Squared	81478.9	56175.2	1.45044	
142	metalloprotease 1; metalloprotease 1 (pitrilysin family). [source:refseq;acc:nm_014889]	Measured	9276.47	7090.37	1.30832	
142	protein arginine n-methyltransferase 1 (ec 2.1.1.-) (interferon receptor 1-bound protein 4). [source:swissprot;acc:q99873]	Rooted	55.6161	66.7332	1.19989	
142	ras-related gtp binding b short isoform; gtp-binding protein ragb. [source:refseq;acc:nm_006064]	Ranked	59	49	1.20408	
143	anillin, actin binding protein (scraps homolog, drosophila); anillin (drosophila scraps homolog), actin binding protein. [source:refseq;acc:nm_018685]	Ranked	59	49	1.20408	
143	beta-1,4 mannosyltransferase. [source:refseq;acc:nm_019109]	Measured	9275.1	7089.65	1.30826	
143	protein arginine n-methyltransferase 4 (ec 2.1.1.-). [source:swissprot;acc:q9nr22]	Rooted	55.6161	66.7332	1.19989	
143	protein phosphatase 1, regulatory (inhibitor) subunit 13b; apoptosis-stimulating protein of p53, 1. [source:refseq;acc:nm_015316]	Squared	124319	86848.2	1.43145	
144	kv channel interacting protein 1; vesicle apc-binding protein; a-type potassium channel modulatory protein 1. [source:refseq;acc:nm_014592]	Ranked	265.686	319.651	1.20312	
144	sad1/unc-84 protein-like 1. [source:swissprot;acc:o94901]	Measured	3349.9	4362.61	1.30231	
144	tumor suppressor p53-binding protein 2 (p53-binding protein 2) (53bp2) (bcl2-binding protein) (bbp). [source:swissprot;acc:q13625]	Squared	123324	86277.9	1.42938	
144	u1 small nuclear ribonucleoprotein 70 kda (u1 snrnp 70 kda) (snrnp70) (u1-70k). [source:swissprot;acc:p08621]	Rooted	55.6161	66.7332	1.19989	
145	filamin a (alpha-filamin) (filamin 1) (endothelial actin-binding protein) (abp-280) (nonmuscle filamin). [source:swissprot;acc:p21333]	Rooted	55.6161	66.7332	1.19989	
145	nuclear dna-binding protein; small unique nuclear receptor corepressor; c1d dna-binding protein. [source:refseq;acc:nm_006333]	Squared	310840	442993	1.42515	
145	potassium channel-interacting protein 4 isoform 4; calsenilin-like protein. [source:refseq;acc:nm_147183]	Ranked	265.639	319.546	1.20293	
145	ubiquitin activating enzyme e1-like protein. [source:refseq;acc:nm_006395]	Measured	16771.5	12889.1	1.30122	
146	associated molecule with the sh3 domain of stam (amsh) like protein. [source:refseq;acc:nm_020799]	Measured	11068	8508.5	1.30082	

Legend:
- Rank is the rank after comparing the two networks
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.