Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 633 to 682 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 633\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ferritin light chain (ferritin l subunit). [source:swissprot;acc:p02792]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6228.39\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7013.19\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.126\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 634\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent disks large-associated protein 4 (dap-4) (sap90/psd-95-associated protein 4) (sapap4) (psd-95/sap90 binding protein 4). [source:swissprot;acc:q9y2h0]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 635\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ferritin heavy polypeptide-like 17. [source:swissprot;acc:q9bxu8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6228.97\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7013.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12595\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 636\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent proteasome subunit alpha type 5 (ec 3.4.25.1) (proteasome zeta chain) (macropain zeta chain) (multicatalytic endopeptidase complex zeta chain). [source:swissprot;acc:p28066]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5713.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6432.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12593\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 637\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative nucleoside diphosphate kinase (ec 2.7.4.6) (ndk) (ndp kinase). [source:swissprot;acc:o60361]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7756.51\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8731.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12573\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 638\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleoside diphosphate kinase a (ec 2.7.4.6) (ndk a) (ndp kinase a) (tumor metastatic process-associated protein) (metastasis inhibition factor nm23) (nm23-h1). [source:swissprot;acc:p15531]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7755.69\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8730.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12572\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 639\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleoside diphosphate kinase b (ec 2.7.4.6) (ndk b) (ndp kinase b) (nm23-h2) (c-myc purine-binding transcription factor puf). [source:swissprot;acc:p22392]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7753.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8728.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12569\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 640\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione s-transferase theta 2 (ec 2.5.1.18) (gst class-theta). [source:swissprot;acc:p30712]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4811.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5414.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12547\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 641\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peroxisomal n1-acetyl-spermine/spermidine oxidase. [source:refseq;acc:nm\_152911]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4810.85\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 5414.21\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.12542\vspace{3pt}}}\\\cline{1-2}\cline{4-4} \parbox{\wcA}{\vspace{3pt}\noindent 642\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atpase inhibitor, mitochondrial precursor. [source:swissprot;acc:q9uii2]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5414.23\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 643\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent polyamine oxidase isoform 1; polyamine oxidase; flavin-containing spermine oxidase; putative cyclin g1 interacting protein; flavin containing amine oxidase. [source:refseq;acc:nm\_019025]\vspace{3pt}}&&&\\\cline{1-2}\cline{4-4} \parbox{\wcA}{\vspace{3pt}\noindent 644\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome c-type heme lyase (ec 4.4.1.17) (cchl) (holocytochrome c- type synthase). [source:swissprot;acc:p53701]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 5414.22\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 645\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione s-transferase theta 1 (ec 2.5.1.18) (gst class-theta) (glutathione transferase t1-1). [source:swissprot;acc:p30711]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4810.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5413.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12538\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 646\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fibrillarin (34 kda nucleolar scleroderma antigen). [source:swissprot;acc:p22087]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4019.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4522.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12506\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 647\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent short transient receptor potential channel 4 (trpc4) (trp-related protein 4) (htrp-4) (htrp4). [source:swissprot;acc:q9ubn4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5167.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4594.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12481\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 648\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent splicing factor 3a subunit 3 (spliceosome associated protein 61) (sap 61) (sf3a60). [source:swissprot;acc:q12874]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5248.07\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5901.72\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.12455\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 649\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent splicing factor 3 subunit 1 (spliceosome associated protein 114) (sap 114) (sf3a120). [source:swissprot;acc:q15459]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 650\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent golgi reassembly stacking protein 2; golgi reassembly stacking protein 2, 55 kda. [source:refseq;acc:nm\_015530]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8362.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9402.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12435\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 651\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ebp50-pdz interactor of 64 kda (epi64 protein). [source:swissprot;acc:q9bxi6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5168.43\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4597.44\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.1242\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 652\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent short transient receptor potential channel 5 (trpc5) (htrp-5) (htrp5). [source:swissprot;acc:q9ul62]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 653\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent methionyl-trna synthetase (ec 6.1.1.10) (methionine--trna ligase) (metrs). [source:swissprot;acc:p56192]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5560.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6248.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12378\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 654\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent histone h3.3 (h3.a) (h3.b) (h3.3q). [source:swissprot;acc:p06351]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4088.63\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4593.43\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.12346\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 655\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dj1099d15.1 (putative dnaj protein). [source:sptrembl;acc:q9h4j9]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 656\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent apolipoprotein a-i binding protein; apoa-i binding protein. [source:refseq;acc:nm\_144772]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6139.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6893.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12293\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 657\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rgs19-interacting protein 1 (gaip c-terminus interacting protein gipc) (rgs-gaip interacting protein) (tax interaction protein 2) (tip-2). [source:swissprot;acc:o14908]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6079.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6824.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12258\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 658\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent apical-like protein (apxl protein). [source:swissprot;acc:q13796]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6088.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6834.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12254\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 659\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent shroom-related protein; f-actin-binding protein; likely ortholog of mouse shroom. [source:refseq;acc:nm\_020859]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6089.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6835.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.12253\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 660\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u2 small nuclear ribonucleoprotein auxiliary factor 35 kda subunit related-protein 1. [source:swissprot;acc:q15695]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5575.18\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6254.85\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.12191\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 661\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent step ii splicing factor slu7. [source:refseq;acc:nm\_006425]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 662\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent partitioning defective-6 homolog gamma (par-6 gamma) (par6d). [source:swissprot;acc:q9byg4]\vspace{3pt}}&\multirow{11}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6374.65\vspace{3pt}}}&\multirow{11}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7145.59\vspace{3pt}}}&\multirow{11}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.12094\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 663\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tubby protein homolog. [source:swissprot;acc:p50607]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 664\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase c, iota type (ec 2.7.1.37) (npkc-iota) (atypical protein kinase c-lamda/iota) (apkc-lambda/iota). [source:swissprot;acc:p41743]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 665\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent numb protein homolog (h-numb) (protein s171). [source:swissprot;acc:p49757]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 666\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tbc1 domain family member 5. [source:swissprot;acc:q92609]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 667\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tubby related protein 1 (tubby-like protein 1). [source:swissprot;acc:o00294]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 668\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent vacuolar protein sorting 29 (vesicle protein sorting 29) (hvps29) (mds007) (pep11) (dc7/dc15). [source:swissprot;acc:q9ubq0]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 669\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent numb-like protein (numb-r). [source:swissprot;acc:q9y6r0]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 670\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tubby related protein 3 (tubby-like protein 3). [source:swissprot;acc:o75386]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 671\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent vacuolar protein sorting 35 (vesicle protein sorting 35) (hvps35) (maternal-embryonic 3). [source:swissprot;acc:q96qk1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 672\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase c, zeta type (ec 2.7.1.37) (npkc-zeta). [source:swissprot;acc:q05513]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 673\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor btf3 (rna polymerase b transcription factor 3). [source:swissprot;acc:p20290]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6933.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7766.54\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1202\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 674\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 4 (spry-4). [source:swissprot;acc:q9c004]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5549.2\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6215.42\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.12006\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 675\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 3 (spry-3). [source:swissprot;acc:o43610]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 676\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 1 (spry-1) (fragment). [source:swissprot;acc:o43609]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 677\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 2 (spry-2). [source:swissprot;acc:o43597]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 678\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor btf3 homolog 3. [source:swissprot;acc:q13892]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6938.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7770.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.11998\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 679\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adenylosuccinate synthase-like 1. [source:refseq;acc:nm\_152328]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6503.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7282.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.11992\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 680\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adenylosuccinate synthetase (ec 6.3.4.4) (imp--aspartate ligase) (adss) (ampsase). [source:swissprot;acc:p30520]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6503.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7282.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.11986\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 681\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ribosomal protein l24-like; 60s ribosomal protein l30 isolog; my024 protein; homolog of yeast ribosomal like protein 24. [source:refseq;acc:nm\_016304]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7170.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8029.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.11976\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 682\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent syntaxin 12. [source:refseq;acc:nm\_177424]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5552.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6217.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1197\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/