Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 351 to 400 of 6456 in total 
Value Type: Ranked
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
176\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna polymerase epsilon p12 subunit (dna polymerase epsilon subunit 4). [source:swissprot;acc:q9nr33]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
275.754\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
235.908\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1689\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 5 (eif-5). [source:swissprot;acc:p55010]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
271.016\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
244.167\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
26.849\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
177\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj820b18.1 (similar to nuclear cap binding protein) (fragment). [source:sptrembl;acc:q8wwk2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
229.406\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
196.695\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1663\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
transcriptional co-repressor sin3a; transcriptional regulator, sin3a (yeast). [source:refseq;acc:nm\_015477]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
241.07\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
267.88\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
26.81\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
178\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
density-regulated protein (drp) (drp1 protein) (smooth muscle cell associated protein-3) (smap-3). [source:swissprot;acc:o43583]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
formin binding protein 3; fas-ligand associated factor 1; huntingtin-interacting protein a; ny-ren-6 antigen. [source:refseq;acc:nm\_017892]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.887\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
194.72\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1652\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
179\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
huntingtin-interacting protein hypa/fbp11 (fragment). [source:sptrembl;acc:o75404]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
226.884\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
194.79\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16476\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
phenylalanine-4-hydroxylase (ec 1.14.16.1) (pah) (phe-4- monooxygenase). [source:swissprot;acc:p00439]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
254.15\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
26.793\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
180\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
pp3111 protein. [source:refseq;acc:nm\_022156]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
tar dna-binding protein-43 (tdp-43). [source:swissprot;acc:q13148]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
256.228\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
298.438\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16474\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
181\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
b9 protein; likely ortholog of mouse endothelial precursor protein b9. [source:refseq;acc:nm\_015681]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
229.818\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.265\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.16294\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
syntaxin 18. [source:swissprot;acc:q9p2w9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
26.793\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
182\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
histone acetyltransferase type b catalytic subunit (ec 2.3.1.48). [source:swissprot;acc:o14929]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
277.546\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
240.461\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15422\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
rd protein. [source:swissprot;acc:p18615]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
26.793\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
183\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
20 kda nuclear cap binding protein (ncbp 20 kda subunit) (cbp20) (ncbp interacting protein 1) (nip1). [source:swissprot;acc:p52298]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
228.306\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.011\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.153\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
glutathione transferase omega 1 (ec 2.5.1.18) (gsto 1-1). [source:swissprot;acc:p78417]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
254.15\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
26.793\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
184\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
androgen-induced 1; cgi-103 protein; androgen induced protein. [source:refseq;acc:nm\_016108]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
odd-skipped related 1; odz (odd oz/ten-m) related 1. [source:refseq;acc:nm\_145260]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
274.027\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
237.79\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15239\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
185\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adiponectin receptor 2. [source:refseq;acc:nm\_024551]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
281.582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
246.371\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14292\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
atp synthase b chain, mitochondrial precursor (ec 3.6.3.14). [source:swissprot;acc:p24539]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
26.793\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
186\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
filamin b, beta (actin binding protein 278); beta filamin; filamin 1 (actin-binding protein-280)-like; filamin b, beta (actin-binding protein-278); filamin b, beta. [source:refseq;acc:nm\_001457]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.444\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14179\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
j domain containing protein 1. [source:swissprot;acc:q9ukb3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
254.15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
26.793\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
187\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
rev1-like; rev1 protein; rev1 (yeast homolog)- like. [source:refseq;acc:nm\_016316]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.444\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14179\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sorting nexin 13 (rgs domain- and phox domain-containing protein) (rgs-px1). [source:swissprot;acc:q9y5w8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
227.357\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
254.15\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
26.793\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
188\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ba127l20.1 (novel glutathione-s-transferase). [source:sptrembl;acc:q9h4y5]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
protein arginine n-methyltransferase 1 (ec 2.1.1.-) (interferon receptor 1-bound protein 4). [source:swissprot;acc:q99873]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.444\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14179\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
189\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cholinephosphate cytidylyltransferase a (ec 2.7.7.15) (phosphorylcholine transferase a) (ctp:phosphocholine cytidylyltransferase a) (ct a) (cct a) (cct-alpha). [source:swissprot;acc:p49585]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.352\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.979\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
protein arginine n-methyltransferase 4 (ec 2.1.1.-). [source:swissprot;acc:q9nr22]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.444\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14179\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
190\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
fad synthetase. [source:refseq;acc:nm\_025207]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.352\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.979\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
u1 small nuclear ribonucleoprotein 70 kda (u1 snrnp 70 kda) (snrnp70) (u1-70k). [source:swissprot;acc:p08621]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.444\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14179\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
191\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthethase 2 (paps synthethase 2) (papss 2) (sulfurylase kinase 2) (sk2) (sk 2) [includes: sulfate adenylyltransferase (ec 2.7.7.4) (sulfate adenylate transferase) (sat) (atp-sulfurylase); adenylylsulfate kinase (ec 2.7.1.25) (adenylylsulfate 3'-phosphotransferase) (aps kinase) (adenosine-5'-phosphosulfate 3'-phosphotransferase) (3'- phosphoadenosine-5'-phosphosulfate synthetase)]. [source:swissprot;acc:o95340]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.352\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.979\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
filamin a (alpha-filamin) (filamin 1) (endothelial actin-binding protein) (abp-280) (nonmuscle filamin). [source:swissprot;acc:p21333]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
198.444\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14179\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
192\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ligatin (hepatocellular carcinoma-associated antigen 56). [source:swissprot;acc:p41214]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.352\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.979\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
musashi 2 isoform a. [source:refseq;acc:nm\_138962]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.491\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.458\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14055\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
193\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthethase 1 (paps synthethase 1) (papss 1) (sulfurylase kinase 1) (sk1) (sk 1) [includes: sulfate adenylyltransferase (ec 2.7.7.4) (sulfate adenylate transferase) (sat) (atp-sulfurylase); adenylylsulfate kinase (ec 2.7.1.25) (adenylylsulfate 3'-phosphotransferase) (aps kinase) (adenosine-5'-phosphosulfate 3'-phosphotransferase) (3'- phosphoadenosine-5'-phosphosulfate synthetase)]. [source:swissprot;acc:o43252]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.352\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.979\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
musashi 1. [source:refseq;acc:nm\_002442]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.491\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.458\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14055\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
194\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
nadph-cytochrome p450 reductase (ec 1.6.2.4) (cpr) (p450r). [source:swissprot;acc:p16435]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.352\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.979\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
nuclear protein ukp68. [source:refseq;acc:nm\_024824]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.491\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.458\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.14055\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
195\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cholinephosphate cytidylyltransferase b (ec 2.7.7.15) (phosphorylcholine transferase b) (ctp:phosphocholine cytidylyltransferase b) (ct b) (cct b) (cct-beta). [source:swissprot;acc:q9y5k3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.352\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.979\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
huntingtin interacting protein c. [source:refseq;acc:nm\_012272]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.971\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
200.417\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13748\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
196\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
forkhead box p4; fork head-related protein like a; winged-helix repressor foxp4. [source:refseq;acc:nm\_138457]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
263.215\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
231.407\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13745\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
hpaii tiny  fragments locus 9c. [source:refseq;acc:nm\_022727]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
272.781\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
246.892\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.889\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
197\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l32. [source:swissprot;acc:p02433]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
241.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
266.969\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.839\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
forkhead box protein p1 (hspc215). [source:swissprot;acc:q9h334]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
263.215\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
231.407\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13745\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
198\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s29. [source:swissprot;acc:p30054]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.849\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.642\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.793\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
forkhead box protein p3 (zinc finger protein jm2) (scurfin). [source:swissprot;acc:q9bzs1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
263.191\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
231.394\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13741\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
199\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s11. [source:swissprot;acc:p04643]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.399\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.088\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.689\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
palmitoyl-protein thioesterase 2 precursor (ec 3.1.2.22) (palmitoyl- protein hydrolase 2) (ppt-2) (g14). [source:swissprot;acc:q9umr5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
242.735\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
276.059\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.13729\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
200\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l17 (l23). [source:swissprot;acc:p18621]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.808\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
267.335\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
25.527\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
egf-like-domain, multiple 7; neu1 protein. [source:refseq;acc:nm\_016215]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
242.718\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
276.018\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1372\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/