Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2480 to 2529 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2480\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 305. [source:swissprot;acc:o43309]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3568.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3676.56\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03015\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2481\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 215 (bwscr2 associated zinc-finger protein 2) (baz 2). [source:swissprot;acc:q9ul58]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3568.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3676.39\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2482\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 213 (putative transcription factor cr53). [source:swissprot;acc:o14771]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3568.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3676.61\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2483\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 18 (zinc finger protein kox11) (fragment). [source:swissprot;acc:p17022]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3568.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3676.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03014\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2484\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger imprinted 2. [source:swissprot;acc:q9nzv7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3568.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3675.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03013\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2485\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 174 (aw-1). [source:swissprot;acc:q15697]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3568.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3675.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03012\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2486\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
maleylacetoacetate isomerase (ec 5.2.1.2) (maai) (glutathione s- transferase zeta 1) (ec 2.5.1.18) (gstz1-1). [source:swissprot;acc:o43708]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3626.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3734.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0299\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2487\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tfiih basal transcription factor complex helicase subunit (ec 3.6.1.-) (dna-repair protein complementing xp-d cells) (xeroderma pigmentosum group d complementing protein) (cxpd) (dna excision repair protein ercc-2). [source:swissprot;acc:p18074]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6963.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7170.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02971\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2488\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein k (hnrnp k) (dc-stretch binding protein) (csbp) (transformation upregulated nuclear protein) (tunp). [source:swissprot;acc:q07244]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5637.59\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5804.47\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0296\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2489\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u4/u6 small nuclear ribonucleoprotein prp4 (u4/u6 snrnp 60 kda protein) (wd splicing factor prp4) (hprp4). [source:swissprot;acc:o43172]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2490\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutathione reductase, mitochondrial precursor (ec 1.8.1.7) (gr) (grase). [source:swissprot;acc:p00390]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6294.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6472.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02836\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2491\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 4-gamma (hnf-4-gamma). [source:swissprot;acc:q14541]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3436.65\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3531.96\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02773\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2492\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
growth arrest and dna-damage-inducible protein gadd45 gamma (cytokine responsive protein cr6). [source:swissprot;acc:o95257]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2493\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
growth arrest and dna-damage-inducible protein gadd45 alpha (dna- damage inducible transcript 1) (ddit1). [source:swissprot;acc:p24522]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2494\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 4-alpha (hnf-4-alpha) (transcription factor hnf-4) (transcription factor 14). [source:swissprot;acc:p41235]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2495\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
growth arrest and dna-damage-inducible protein gadd45 beta (negative growth-regulatory protein myd118) (myeloid differentiation primary response protein myd118). [source:swissprot;acc:o75293]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2496\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 35, member b1; udp-galactose transporter related. [source:refseq;acc:nm\_005827]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5534.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5684.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0272\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2497\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dead/h (asp-glu-ala-asp/his) box polypeptide 11; dead/h box-11 (chl1-related helicase gene-1); yeast chl1 homolog. [source:refseq;acc:nm\_030655]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7002.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7192.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02713\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2498\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
helicase (fragment). [source:sptrembl;acc:q92771]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7002.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7191.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02711\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2499\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
centromere protein j; centrosomal p4.1-associated protein; lyst-interacting protein lip1; lag-3-associated protein. [source:refseq;acc:nm\_018451]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8186.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7971.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02694\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2500\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rna polymerase i associated factor 53. [source:refseq;acc:nm\_022490]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3804.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3705.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02685\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2501\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutamate dehydrogenase 2, mitochondrial precursor (ec 1.4.1.3) (gdh). [source:swissprot;acc:p49448]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6562.71\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6738.23\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02675\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2502\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutamate dehydrogenase 1, mitochondrial precursor (ec 1.4.1.3) (gdh). [source:swissprot;acc:p00367]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2503\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
succinyl-coa ligase [gdp-forming] alpha-chain, mitochondrial precursor (ec 6.2.1.4) (succinyl-coa synthetase, alpha chain) (scs-alpha). [source:swissprot;acc:p53597]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5996.06\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6155.81\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02664\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2504\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
succinyl-coa ligase [adp-forming] beta-chain, mitochondrial precursor (ec 6.2.1.5) (succinyl-coa synthetase, betaa chain) (scs-betaa) (atp- specific succinyl-coa synthetase beta subunit). [source:swissprot;acc:q9p2r7]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2505\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (ec 1.3.5.1) (ip) (iron-sulfur subunit of complex ii). [source:swissprot;acc:p21912]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6237.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6400.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02612\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2506\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2-oxoglutarate dehydrogenase e1 component, mitochondrial precursor (ec 1.2.4.2) (alpha-ketoglutarate dehydrogenase). [source:swissprot;acc:q02218]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6200.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6362.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0261\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2507\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mevalonate kinase (ec 2.7.1.36) (mk). [source:swissprot;acc:q03426]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4243.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4352.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02571\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2508\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
lipoic acid synthetase, mitochondrial (lip-syn) (lipoate synthase) (hussy-01) (fragment). [source:swissprot;acc:o43766]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6469.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6634.31\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02548\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2509\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
reticulon protein 3 (neuroendocrine-specific protein-like 2) (nsp-like protein ii) (nsplii). [source:swissprot;acc:o95197]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6202.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6360.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02547\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2510\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor (integral membrane protein cii-3) (qps1) (qps-1) (succinate dehydrogenase complex subunit c) (succinate-ubiquinone oxidoreductase cytochrome b large subunit) (cybl). [source:swissprot;acc:q99643]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6256.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6415.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02537\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2511\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
integral membrane protein cii-3b. [source:sptrembl;acc:o75609]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6256.42\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6415.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02535\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2512\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
reticulon protein 2 (neuroendocrine-specific protein-like 1) (nsp-like protein 1) (nspli). [source:swissprot;acc:o75298]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6203.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6360.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02533\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2513\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
reticulon 1 (neuroendocrine-specific protein). [source:swissprot;acc:q16799]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6204.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6360.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02521\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2514\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eh-domain containing protein 1 (testilin) (hpast1). [source:swissprot;acc:q9h4m9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6203.92\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6360.25\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0252\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2515\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eh-domain containing protein 3. [source:swissprot;acc:q9nzn3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6203.94\vspace{3pt}}&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2516\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eh-domain containing protein 4 (eh domain-containing protein fksg7) (hepatocellular carcinoma-associated protein 10/11). [source:swissprot;acc:q9h223]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6203.95\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6360.24\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02519\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2517\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eh-domain containing protein 2. [source:swissprot;acc:q9nzn4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6203.96\vspace{3pt}}&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2518\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sin3 associated polypeptide p18 (2hor0202). [source:swissprot;acc:o00422]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6204.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6360.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02516\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2519\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adenine phosphoribosyltransferase (ec 2.4.2.7) (aprt). [source:swissprot;acc:p07741]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5964.17\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6113.96\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02511\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2520\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
estradiol 17 beta-dehydrogenase 1 (ec 1.1.1.62) (17-beta-hsd 1) (placental 17-beta-hydroxysteroid dehydrogenase) (20 alpha- hydroxysteroid dehydrogenase) (20-alpha-hsd) (e2dh). [source:swissprot;acc:p14061]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2521\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
17 beta-hydroxysteroid dehydrogenase. [source:sptrembl;acc:q13034]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2522\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
retinol dehydrogenase 8 (all-trans); photoreceptor outer segment all-trans retinol dehydrogenase. [source:refseq;acc:nm\_015725]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2523\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna-directed rna polymerase i 40 kda polypeptide (ec 2.7.7.6) (rpa40) (rpa39). [source:swissprot;acc:o15160]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3803.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3710.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02508\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2524\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
myo-inositol 1-phosphate synthase a1. [source:refseq;acc:nm\_016368]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
8695.15\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
8912.98\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02505\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2525\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
arsenical pump-driving atpase (ec 3.6.3.16) (arsenite-translocating atpase) (arsenical resistance atpase) (arsenite-transporting atpase) (arsa) (asna-i). [source:swissprot;acc:o43681]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2526\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-like protein gdx (ubiquitin-like protein 4). [source:swissprot;acc:p11441]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2527\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
large proline-rich protein bat3 (hla-b-associated transcript 3) (g3). [source:swissprot;acc:p46379]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2528\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
reticulon 4 (neurite outgrowth inhibitor) (nogo protein) (foocen) (neuroendocrine-specific protein) (nsp) (neuroendocrine specific protein c homolog) (rtn-x) (reticulon 5) (my043 protein). [source:swissprot;acc:q9nqc3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6205.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6359.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02487\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2529\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein cgi-147. [source:swissprot;acc:q9y3e5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6436.43\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6283\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02442\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/