Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Value Type Interaction Map description Rank Network Comparison Type Gene Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 75 to 124 of 3228 in total 
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s26. [source:swissprot;acc:p02383]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1655\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5488.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5131.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06953\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s27 (metallopan-stimulin 1) (mps-1). [source:swissprot;acc:p42677]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2126\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4806.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5066.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05422\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s28. [source:swissprot;acc:p25112]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
700\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7161.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8015.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11936\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s29. [source:swissprot;acc:p30054]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1756\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3582.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3357.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.067\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s3. [source:swissprot;acc:p23396]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2235\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3674.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3508.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04736\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s30. [source:swissprot;acc:q05472]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1145\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5893.97\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6416.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08858\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s3a. [source:swissprot;acc:p49241]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2263\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4918.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5145.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0461\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s4, x isoform (single copy abundant mrna protein) (scr10). [source:swissprot;acc:p12750]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1974\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3678.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3470.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05993\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s4, y isoform 2. [source:swissprot;acc:q8td47]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1967\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3678.56\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3470.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05994\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s5. [source:swissprot;acc:p46782]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2343\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3672.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3516.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04413\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s7 (s8). [source:swissprot;acc:p23821]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1642\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5782.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6186.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06977\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s8. [source:swissprot;acc:p09058]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1471\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5659.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6087.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07564\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s9. [source:swissprot;acc:p46781]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2628\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3933.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3877.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0146\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein sa (p40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) (nem/1chd4) (multidrug resistance- associated protein mgr1-ag). [source:swissprot;acc:p08865]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2402\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5078.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5275.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03884\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
43 kda receptor-associated protein of the synapse (rapsyn) (acetylcholine receptor-associated 43 kda protein) (43 kda postsynaptic protein). [source:swissprot;acc:q13702]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1402\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6160.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6640.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07804\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
44050 protein. [source:refseq;acc:nm\_178832]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
376\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
17385.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
14889.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.16769\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
45 kda calcium-binding protein precursor (cab45) (stromal cell-derived factor 4) (sdf-4). [source:swissprot;acc:q9brk5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
972\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7813.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8570.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09684\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, beta-1 subunit (ampk beta-1 chain) (ampkb). [source:swissprot;acc:q9y478]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
691\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6920.69\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7747.63\vspace{3pt}}}&\multirow{7}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.11949\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, beta-2 subunit (ampk beta-2 chain). [source:swissprot;acc:o43741]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
689\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, catalytic alpha-1 chain (ec 2.7.1.-) (ampk alpha-1 chain). [source:swissprot;acc:q13131]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
688\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6920.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7747.6\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, catalytic alpha-2 chain (ec 2.7.1.-) (ampk alpha-2 chain). [source:swissprot;acc:p54646]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
687\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6920.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7747.65\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-1 subunit (ampk gamma-1 chain) (ampkg). [source:swissprot;acc:p54619]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
686\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6920.69\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7747.63\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-2 subunit (ampk gamma-2 chain) (ampk gamma2) (h91620p). [source:swissprot;acc:q9ugj0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
692\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-3 subunit (ampk gamma-3 chain) (ampk gamma3). [source:swissprot;acc:q9ugi9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
690\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5'-methylthioadenosine phosphorylase (ec 2.4.2.28) (mta phosphorylase) (mtapase). [source:swissprot;acc:q13126]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1606\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5232.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5606.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07138\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5,6-dihydroxyindole-2-carboxylic acid oxidase precursor (ec 1.14.18.-) (dhica oxidase) (tyrosinase-related protein 1) (trp-1) (trp1) (trp) (catalase b) (glycoprotein-75) (melanoma antigen gp75). [source:swissprot;acc:p17643]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1229\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5998.69\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6509.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08519\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5-aminolevulinic acid synthase, erythroid-specific, mitochondrial precursor (ec 2.3.1.37) (delta-aminolevulinate synthase) (delta-ala synthetase) (alas-e). [source:swissprot;acc:p22557]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1910\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6858.84\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7287.27\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.06246\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5-aminolevulinic acid synthase, nonspecific, mitochondrial precursor (ec 2.3.1.37) (delta-aminolevulinate synthase) (delta-ala synthetase) (alas-h). [source:swissprot;acc:p13196]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1915\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5-formyltetrahydrofolate cyclo-ligase (ec 6.3.3.2) (5,10-methenyl- tetrahydrofolate synthetase) (methenyl-thf synthetase) (mthfs). [source:swissprot;acc:p49914]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1833\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6175.23\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6572.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06439\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5-methyltetrahydrofolate--homocysteine methyltransferase (ec 2.1.1.13) (methionine synthase, vitamin-b12 dependent) (ms). [source:swissprot;acc:q99707]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1115\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5795.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6314.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08957\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
54 kda nuclear rna- and dna-binding protein (p54(nrb)) (p54nrb) (55 kda nuclear protein) (nmt55) (non-pou domain-containing octamer- binding protein) (dna-binding p52/p100 complex, 52 kda subunit). [source:swissprot;acc:q15233]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2028\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
10243.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9686.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05746\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-phosphofructokinase, liver type (ec 2.7.1.11) (phosphofructokinase 1) (phosphohexokinase) (phosphofructo-1-kinase isozyme b) (pfk-b). [source:swissprot;acc:p17858]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
764\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4250.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4729.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11269\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-phosphofructokinase, muscle type (ec 2.7.1.11) (phosphofructokinase 1) (phosphohexokinase) (phosphofructo-1-kinase isozyme a) (pfk-a) (phosphofructokinase-m). [source:swissprot;acc:p08237]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
763\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4250.54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4729.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11272\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-phosphofructokinase, type c (ec 2.7.1.11) (phosphofructokinase 1) (phosphohexokinase) (phosphofructo-1-kinase isozyme c) (pfk-c) (6-phosphofructokinase, platelet type). [source:swissprot;acc:q01813]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
759\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4254.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4736.03\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11315\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-phosphogluconate dehydrogenase, decarboxylating (ec 1.1.1.44). [source:swissprot;acc:p52209]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1339\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5988.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6464.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07964\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-phosphogluconolactonase (ec 3.1.1.31) (6pgl). [source:swissprot;acc:o95336]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1627\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6038.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6463.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07046\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-pyruvoyl tetrahydrobiopterin synthase (ec 4.2.3.12) (ptps) (ptp synthase). [source:swissprot;acc:q03393]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2904\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60 kda heat shock protein, mitochondrial precursor (hsp60) (60 kda chaperonin) (cpn60) (heat shock protein 60) (hsp-60) (mitochondrial matrix protein p1) (p60 lymphocyte protein) (hucha60). [source:swissprot;acc:p10809]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1313\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5457.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5899.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08112\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60 kda tat interactive protein (tip60) (hiv-1 tat interactive protein) (cpla(2) interacting protein). [source:swissprot;acc:q92993]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1751\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6011.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6414.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06711\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s acidic ribosomal protein p0 (l10e). [source:swissprot;acc:p05388]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2258\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5150.31\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5388.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04616\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s acidic ribosomal protein p1. [source:swissprot;acc:p05386]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2418\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4857.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5039.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03763\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s acidic ribosomal protein p2. [source:swissprot;acc:p05387]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2743\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4824.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4813.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0022\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l10 (qm protein) (tumor suppressor qm) (laminin receptor homolog). [source:swissprot;acc:p27635]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2233\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3614.08\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3450.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04754\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l10a (csa-19). [source:swissprot;acc:p53025]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2255\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3624.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3463.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04655\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l11, mitochondrial precursor (l11mt) (cgi-113). [source:swissprot;acc:q9y3b7]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2417\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3598.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3467.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03775\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l11. [source:swissprot;acc:p39026]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1834\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3593.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3375.93\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06437\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l12 like protein. [source:sptrembl;acc:o60886]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2186\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3586.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3414.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05035\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l12, mitochondrial precursor (l12mt) (5c5-2). [source:swissprot;acc:p52815]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2372\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3677.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3526.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04278\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l12. [source:swissprot;acc:p30050]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2185\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3586.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3414.42\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05035\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l13, mitochondrial (l13mt). [source:swissprot;acc:q9byd1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2447\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3730.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3611.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03309\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/