Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2425 to 2474 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2425\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mrna decapping enzyme; histidine triad protein member 5; heat shock-like protein 1. [source:refseq;acc:nm\_014026]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7355.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7088.93\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0376\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2426\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tata-binding protein-associated phosphoprotein (down-regulator of transcription 1) (dr1 protein). [source:swissprot;acc:q01658]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6123.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6351.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03729\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2427\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial 28s ribosomal protein s2 (mrp-s2) (cgi-91). [source:swissprot;acc:q9y399]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5333.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5531.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03709\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2428\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fragile x mental retardation syndrome related protein 2. [source:swissprot;acc:p51116]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7243.19\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7509.81\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03681\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2429\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fragile x mental retardation syndrome related protein 1. [source:swissprot;acc:p51114]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2430\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nucleoporin nup43 (p42). [source:swissprot;acc:q8nfh3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7243.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7509.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0368\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2431\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fragile x mental retardation 1 protein (protein fmr-1) (fmrp). [source:swissprot;acc:q06787]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7242.75\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7508.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03676\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2432\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
gcn5-like protein 1 (rt14 protein). [source:swissprot;acc:p78537]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8154.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8453.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03671\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2433\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial 60s ribosomal protein l27 (l27mt) (hspc250). [source:swissprot;acc:q9p0m9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4585.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4753.26\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0365\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2434\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
wd repeat domain 26. [source:refseq;acc:nm\_025160]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6423.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6655.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03619\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2435\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
activator of camp-responsive element modulator (crem) in testis; lim protein act. [source:refseq;acc:nm\_020482]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3669.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3797.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03501\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2436\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s14 (pro2640). [source:swissprot;acc:p06366]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3708.67\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3584.47\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03465\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2437\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s18 (ke-3) (ke3). [source:swissprot;acc:p25232]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2438\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rna, u transporter 1; snurportin-1. [source:refseq;acc:nm\_005701]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7139.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7384.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03443\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2439\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
putative eukaryotic translation initiation factor 1a (eif-1a) (eif- 4c). [source:swissprot;acc:o75642]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3754.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3629.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03441\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2440\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u3 snornp protein 4 homolog. [source:refseq;acc:nm\_033416]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4730.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4891.26\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03395\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2441\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 3 mu 2 subunit (clathrin coat assembly protein ap47 homolog 2) (clathrin coat associated protein ap47 homolog 2) (golgi adaptor ap-1 47 kda protein homolog 2) (ha1 47 kda subunit homolog 2) (clathrin assembly protein assembly protein complex 1 medium chain homolog 2) (p47b). [source:swissprot;acc:p53677]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6477.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6695.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03362\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2442\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
breast cancer type 1 susceptibility protein. [source:swissprot;acc:p38398]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5454.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5637.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0336\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2443\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
skeletal muscle lim-protein 2 (slim 2) (four and a half lim domains protein 3) (fhl-3). [source:swissprot;acc:q13643]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3634.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3756.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03359\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2444\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 3 mu 1 subunit (mu-adaptin 3a) (ap-3 adapter complex mu3a subunit). [source:swissprot;acc:q9y2t2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6478.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6695.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03358\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2445\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
skeletal muscle lim-protein 3 (slim 3) (lim-domain protein dral) (four and a half lim domains protein 2) (fhl-2). [source:swissprot;acc:q14192]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3633.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3754.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03353\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2446\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 16 kda polypeptide (ec 2.7.7.6) (rpb4). [source:swissprot;acc:o15514]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4031.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4166.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0335\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2447\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l13, mitochondrial (l13mt). [source:swissprot;acc:q9byd1]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3730.53\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3611.05\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03309\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2448\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s16. [source:swissprot;acc:p17008]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2449\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l13a (23 kda highly basic protein). [source:swissprot;acc:p40429]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3730.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3611.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03303\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2450\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pyruvate dehydrogenase e1 component beta subunit, mitochondrial precursor (ec 1.2.4.1) (pdhe1-b). [source:swissprot;acc:p11177]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6737.15\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6957.34\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03268\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2451\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor (ec 1.2.4.4) (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdh e1-alpha). [source:swissprot;acc:p12694]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2452\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (ec 1.3.5.1) (fp) (flavoprotein subunit of complex ii). [source:swissprot;acc:p31040]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6042.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6237.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03224\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2453\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
conserved oligomeric golgi complex component 6. [source:swissprot;acc:q9y2v7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6931.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7152.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03197\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2454\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
homeobox protein prh (hematopoietically expressed homeobox) (homeobox protein hex). [source:swissprot;acc:q03014]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8751.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8480.03\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03196\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2455\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
prip-interacting protein pipmt; prip-interacting protein with methyltransferase domain. [source:refseq;acc:nm\_024831]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5978.83\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6166.89\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03145\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2456\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pdz/coiled-coil domain binding partner for the rho-family gtpase tc10; fused in glioblastoma; golgi associated pdz and coiled-coil motif containing protein; cftr-associated ligand. [source:refseq;acc:nm\_020399]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2457\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
yme1-like 1 isoform 3; atp-dependent metalloprotease ftsh1 homolog. [source:refseq;acc:nm\_014263]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4998.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5155.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03144\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2458\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
presenilin-like protein 2 (ec 3.4.99.-) (sppl2a protein). [source:swissprot;acc:q8tct8]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
4751.74\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
4900.37\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03128\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2459\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
gtp-binding nuclear protein ran (tc4) (ran gtpase) (androgen receptor- associated protein 24). [source:swissprot;acc:p17080]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2460\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
presenilin-like protein 1 (ec 3.4.99.-) (sppl2b protein). [source:swissprot;acc:q8tct7]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2461\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphoribosylformylglycinamidine synthase (ec 6.3.5.3) (fgam synthase) (fgams) (formylglycinamide ribotide amidotransferase) (fgarat) (formylglycinamide ribotide synthetase). [source:swissprot;acc:o15067]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5114.15\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5272.92\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03105\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2462\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
bifunctional purine biosynthesis protein purh [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase (ec 2.1.2.3) (aicar transformylase); imp cyclohydrolase (ec 3.5.4.10) (inosinicase) (imp synthetase) (atic)]. [source:swissprot;acc:p31939]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2463\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
multifunctional protein ade2 [includes: phosphoribosylaminoimidazole- succinocarboxamide synthase (ec 6.3.2.6) (saicar synthetase); phosphoribosylaminoimidazole carboxylase (ec 4.1.1.21) (air carboxylase) (airc)]. [source:swissprot;acc:p22234]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2464\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial precursor (ec 2.3.1.12) (e2) (pdc-e2) (70 kda mitochondrial autoantigen of primary biliary cirrhosis) (pbc) (m2 antigen complex 70 kda subunit). [source:swissprot;acc:p10515]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6291.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6486.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03098\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2465\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
germ cell-less. [source:refseq;acc:nm\_022471]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7764.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8003.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03075\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2466\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pre-b-cell leukemia transcription factor-1 (homeobox protein pbx1) (homeobox protein prl). [source:swissprot;acc:p40424]\vspace{3pt}}&\multirow{9}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7765.3\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
8004\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03074\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2467\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pre-b-cell leukemia transcription factor-3 (homeobox protein pbx3). [source:swissprot;acc:p40426]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2468\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hyporthetical protein mgc27169. [source:refseq;acc:nm\_176782]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2469\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
homeobox protein meis1. [source:swissprot;acc:o00470]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2470\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
homeobox protein meis2 (meis1-related protein 1). [source:swissprot;acc:o14770]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2471\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
bag-family molecular chaperone regulator-2. [source:swissprot;acc:o95816]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2472\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pre-b-cell leukemia transcription factor-2 (homeobox protein pbx2) (g17 protein). [source:swissprot;acc:p40425]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2473\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pre-b-cell leukemia transcription factor 4. [source:refseq;acc:nm\_025245]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2474\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
homeobox protein meis3 (meis1-related protein 2) (fragment). [source:swissprot;acc:q99687]\vspace{3pt}}&&&\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/