Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2233 to 2282 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 2233\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tripartite motif protein 3 (ring finger protein 22) (brain-expressed ring finger protein). [source:swissprot;acc:o75382]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 202.414\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.691\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00631\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2234\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent seven in absentia homolog 1. [source:refseq;acc:nm\_003031]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 223.608\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 225.005\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00625\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2235\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent arginyl-trna synthetase-like; arginine-trna ligase. [source:refseq;acc:nm\_020320]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 200.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 199.711\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0062\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2236\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein regulator of cytokinesis 1; protein regulating cytokinesis 1. [source:refseq;acc:nm\_003981]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.959\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.337\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00618\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2237\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bromodomain-containing protein 3 (ring3-like protein). [source:swissprot;acc:q15059]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.965\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.343\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2238\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bromodomain-containing protein 4 (hunk1 protein). [source:swissprot;acc:o60885]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.959\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.337\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2239\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent testis-specific bromodomain protein. [source:refseq;acc:nm\_001726]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.958\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.336\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2240\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nag14 protein. [source:refseq;acc:nm\_022143]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.959\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.337\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2241\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bromodomain-containing protein 2 (ring3 protein) (o27.1.1). [source:swissprot;acc:p25440]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.338\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2242\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent integral membrane protein 2b (transmembrane protein bri) [contains: abri/adan amyloid peptide]. [source:swissprot;acc:q9y287]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 209.197\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 207.915\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00617\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2243\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent integral membrane protein 2c (transmembrane protein bri3) (npd018). [source:swissprot;acc:q9nqx7]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2244\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent integral membrane protein 2a (e25 protein). [source:swissprot;acc:o43736]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2245\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fibulin-2 precursor. [source:swissprot;acc:p98095]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.618\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 190.448\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00614\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2246\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial ribosomal protein l18. [source:refseq;acc:nm\_014161]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 223.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.943\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0061\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2247\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sipl protein. [source:refseq;acc:nm\_018269]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 208.609\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 207.346\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00609\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2248\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kinesin-like protein kif3c. [source:swissprot;acc:o14782]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.045\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 220.377\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00608\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2249\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pyruvate carboxylase, mitochondrial precursor (ec 6.4.1.1) (pyruvic carboxylase) (pcb). [source:swissprot;acc:p11498]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 181.091\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 179.999\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00607\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2250\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent likely ortholog of mouse variant polyadenylation protein cstf-64. [source:refseq;acc:nm\_015235]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 164.064\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 165.058\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00606\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2251\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent e-1 enzyme. [source:refseq;acc:nm\_021204]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 208.315\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 207.061\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2252\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent delta-aminolevulinic acid dehydratase (ec 4.2.1.24) (porphobilinogen synthase) (aladh). [source:swissprot;acc:p13716]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.185\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.498\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00605\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2253\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kinesin-like protein kif3b (microtubule plus end-directed kinesin motor 3b) (hh0048). [source:swissprot;acc:o15066]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.047\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 220.371\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00604\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2254\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin-conjugating enzyme e2-17 kda 3 (ec 6.3.2.19) (ubiquitin- protein ligase) (ubiquitin carrier protein) (e2(17)kb 3). [source:swissprot;acc:p47986]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 193.065\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 194.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00598\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2255\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent alpha-fetoprotein enhancer binding protein (at motif-binding factor) (at-binding transcription factor 1). [source:swissprot;acc:q15911]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 202.366\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00595\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2256\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent seven in absentia homolog 2. [source:refseq;acc:nm\_005067]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 223.546\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.869\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00592\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2257\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nicotinate-nucleotide pyrophosphorylase [carboxylating] (ec 2.4.2.19) (quinolinate phosphoribosyltransferase [decarboxylating]) (qaprtase) (qprtase). [source:swissprot;acc:q15274]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 212.563\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.315\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00591\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2258\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hsp90 co-chaperone cdc37 (hsp90 chaperone protein kinase-targeting subunit) (p50cdc37). [source:swissprot;acc:q16543]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 223.888\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 225.191\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00582\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2259\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent meiotic recombination protein dmc1/lim15 homolog. [source:swissprot;acc:q14565]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.391\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.606\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00569\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2260\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent leng5 protein. [source:refseq;acc:nm\_024075]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 221.599\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 220.351\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00566\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2261\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tryptophanyl-trna synthetase (ec 6.1.1.2) (tryptophan--trna ligase) (trprs) (ifp53) (hwrs). [source:swissprot;acc:p23381]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2262\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ribulose-5-phosphate-3-epimerase; ribulose 5-phosphate 3-epimerase. [source:refseq;acc:nm\_006916]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2263\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tryptophanyl-trna synthetase, mitochondrial precursor (ec 6.1.1.2) (tryptophan--trna ligase) (trprs) ((mt)trprs). [source:swissprot;acc:q9ugm6]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2264\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent thiamin pyrophosphokinase 1; mouse thiamin pyrophosphokinase homolog; thiamine pyrophosphokinase. [source:refseq;acc:nm\_022445]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2265\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitotic spindle assembly checkpoint protein mad2a (mad2-like 1) (hsmad2). [source:swissprot;acc:q13257]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 211.597\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 210.416\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00561\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2266\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent probable cation-transporting atpase 1 (ec 3.6.1.-). [source:swissprot;acc:q9nq11]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2267\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tata box binding protein (transcription initiation factor tfiid) (tata-box factor) (tata sequence-binding protein) (tbp). [source:swissprot;acc:p20226]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2268\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tripartite motif protein 2. [source:swissprot;acc:q9c040]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 202.312\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.437\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00556\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2269\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 10 (26s proteasome regulatory subunit p28) (gankyrin). [source:swissprot;acc:o75832]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.419\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.627\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2270\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mms19-like (met18 homolog, s. cerevisiae); homolog of yeast mms19; mms19 (met18 s. cerevisiae)-like. [source:refseq;acc:nm\_022362]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 207.54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 208.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00554\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2271\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dimethylaniline monooxygenase [n-oxide forming] 5 (ec 1.14.13.8) (hepatic flavin-containing monooxygenase 5) (fmo 5) (dimethylaniline oxidase 5). [source:swissprot;acc:p49326]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 216.622\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 215.436\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00551\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2272\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative dimethylaniline monooxygenase [n-oxide forming] 6 (ec 1.14.13.8) (flavin-containing monooxygenase 6) (fmo 6) (dimethylaniline oxidase 6). [source:swissprot;acc:o60774]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2273\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitogen-activated protein kinase kinase kinase 7 interacting protein 1 (tak1-binding protein 1). [source:swissprot;acc:q15750]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.015\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.858\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00546\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2274\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 6-phosphogluconate dehydrogenase, decarboxylating (ec 1.1.1.44). [source:swissprot;acc:p52209]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.642\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.801\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00542\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2275\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dehydrodolichyl diphosphate synthase. [source:refseq;acc:nm\_024887]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 207.319\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 208.44\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00541\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2276\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dimethylaniline monooxygenase [n-oxide forming] 3 (ec 1.14.13.8) (hepatic flavin-containing monooxygenase 3) (fmo 3) (dimethylaniline oxidase 3) (fmo form 2) (fmo ii). [source:swissprot;acc:p31513]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.613\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.448\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2277\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent regulator of chromosome condensation (cell cycle regulatory protein). [source:swissprot;acc:p18754]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 191.936\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 190.909\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00538\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2278\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger homeobox protein 1b (smad interacting protein 1) (smadip1) (hrihfb2411). [source:swissprot;acc:o60315]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2279\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor 8 (nil-2-a zinc finger protein) (negative regulator of il2). [source:swissprot;acc:p37275]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2280\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent proteasome subunit alpha type 7 (ec 3.4.25.1) (proteasome subunit rc6-1) (proteasome subunit xapc7). [source:swissprot;acc:o14818]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 212.793\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.657\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00537\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2281\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent splicing coactivator subunit srm300; rna binding protein; at-rich element binding factor. [source:refseq;acc:nm\_016333]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 219.652\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.482\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00536\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2282\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent splicing factor u2af 35 kda subunit (u2 auxiliary factor 35 kda subunit) (u2 snrnp auxiliary factor small subunit). [source:swissprot;acc:q01081]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/