Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2225 to 2274 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2225\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l9. [source:swissprot;acc:p32969]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3750.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3580.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04766\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2226\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ump-cmp kinase (ec 2.7.4.14) (cytidylate kinase) (deoxycytidylate kinase) (cytidine monophosphate kinase). [source:swissprot;acc:p30085]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3650.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3484.91\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0476\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2227\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
gtp:amp phosphotransferase mitochondrial (ec 2.7.4.10) (ak3) (adenylate kinase 3 alpha like 1). [source:swissprot;acc:q9uij7]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2228\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adenylate kinase isoenzyme 4, mitochondrial (ec 2.7.4.3) (atp-amp transphosphorylase). [source:swissprot;acc:p27144]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3650.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3484.97\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04759\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2229\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
surfeit locus protein 5. [source:swissprot;acc:q15528]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3650.8\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3484.94\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2230\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 291. [source:swissprot;acc:q9by12]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2231\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
peroxisome biogenesis factor 1 (peroxin-1) (peroxisome biogenesis disorder protein 1). [source:swissprot;acc:o43933]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2232\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein 1-4 (atp binding protein associated with cell differentiation). [source:swissprot;acc:o14530]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2233\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l10 (qm protein) (tumor suppressor qm) (laminin receptor homolog). [source:swissprot;acc:p27635]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3614.08\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3450.07\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04754\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2234\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ribosomal protein l10-like protein. [source:refseq;acc:nm\_080746]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3614.07\vspace{3pt}}&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2235\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s3. [source:swissprot;acc:p23396]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3674.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3508.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04736\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2236\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/potassium-transporting atpase alpha-1 chain precursor (ec 3.6.3.9) (sodium pump 1) (na+/k+ atpase 1). [source:swissprot;acc:p05023]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5902.27\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6181.21\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04726\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2237\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cathepsin l2 precursor (ec 3.4.22.43) (cathepsin v) (cathepsin u). [source:swissprot;acc:o60911]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5902.26\vspace{3pt}}&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2238\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cathepsin l precursor (ec 3.4.22.15) (major excreted protein) (mep). [source:swissprot;acc:p07711]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5902.27\vspace{3pt}}}&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2239\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/potassium-transporting atpase alpha-3 chain (ec 3.6.3.9) (sodium pump 3) (na+/k+ atpase 3) (alpha(iii)). [source:swissprot;acc:p13637]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2240\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/potassium-transporting atpase alpha-2 chain precursor (ec 3.6.3.9) (sodium pump 2) (na+/k+ atpase 2). [source:swissprot;acc:p50993]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2241\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein arginine n-methyltransferase 3 (ec 2.1.1.-) (fragment). [source:swissprot;acc:o60678]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3670.45\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3504.91\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04723\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2242\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s2 (s4) (llrep3 protein). [source:swissprot;acc:p15880]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2243\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
inosine-5'-monophosphate dehydrogenase 2 (ec 1.1.1.205) (imp dehydrogenase 2) (impdh-ii) (impd 2). [source:swissprot;acc:p12268]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5776.96\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6049.61\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0472\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2244\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
gmp synthase [glutamine-hydrolyzing] (ec 6.3.5.2) (glutamine amidotransferase) (gmp synthetase). [source:swissprot;acc:p49915]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2245\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
inosine-5'-monophosphate dehydrogenase 1 (ec 1.1.1.205) (imp dehydrogenase 1) (impdh-i) (impd 1). [source:swissprot;acc:p20839]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2246\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj718p11.1.2 (novel class ii aminotransferase similar to serine palmotyltransferase (isoform 2)) (fragment). [source:sptrembl;acc:q9ugb5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6209.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6501.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04706\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2247\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rna-binding protein with multiple splicing (rbp-ms). [source:swissprot;acc:q93062]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5819.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6092.93\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04701\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2248\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal recognition particle 54 kda protein (srp54). [source:swissprot;acc:p13624]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5833.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6106.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04688\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2249\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
alcohol dehydrogenase class iii chi chain (ec 1.1.1.1) (glutathione- dependent formaldehyde dehydrogenase) (ec 1.2.1.1) (fdh). [source:swissprot;acc:p11766]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6834.03\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7153.66\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04677\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2250\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
esterase d (ec 3.1.1.1). [source:swissprot;acc:p10768]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2251\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
serine palmitoyltransferase 2 (ec 2.3.1.50) (long chain base biosynthesis protein 2) (lcb 2) (serine-palmitoyl-coa transferase 2) (spt 2). [source:swissprot;acc:o15270]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6196.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6486.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04671\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2252\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
arf gtpase-activating protein git2 (g protein-coupled receptor kinase- interactor 2). [source:swissprot;acc:q14161]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5840.54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6113.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04665\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2253\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial ribosomal protein l17; lyst-interacting protein lip2. [source:refseq;acc:nm\_022061]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3629.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3467.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04664\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2254\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
alpha-1-acid glycoprotein 2 precursor (agp 2) (orosomucoid 2) (omd 2). [source:swissprot;acc:p19652]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7383.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7727.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04663\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2255\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l10a (csa-19). [source:swissprot;acc:p53025]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3624.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3463.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04655\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2256\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin. [source:swissprot;acc:p02248]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7390.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7733.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04648\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2257\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sr rich protein. [source:refseq;acc:nm\_032870]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6245.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6534.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04626\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2258\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s acidic ribosomal protein p0 (l10e). [source:swissprot;acc:p05388]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5150.31\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5388.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04616\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2259\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-conjugating enzyme e2 g2 (ec 6.3.2.19) (ubiquitin-protein ligase g2) (ubiquitin carrier protein g2). [source:swissprot;acc:p56554]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6486.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6786.23\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04615\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2260\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
block 23. [source:sptrembl;acc:q8nhw5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5150.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5387.84\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2261\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
38 kda fk-506 binding protein homolog (fkbpr38) (fk506-binding protein 8). [source:swissprot;acc:q14318]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6486.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6786.23\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2262\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
similar to ribosomal protein, large, p0. [source:sptrembl;acc:q96fq9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5148.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5386.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04612\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2263\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s3a. [source:swissprot;acc:p49241]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4918.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5145.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0461\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2264\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l36, mitochondrial precursor (l36mt) (brca1- interacting protein 1). [source:swissprot;acc:q9p0j6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3633.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3473.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04608\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2265\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein transport protein sec61 gamma subunit. [source:swissprot;acc:p38384]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3612.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3453.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04606\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2266\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription factor iib. [source:refseq;acc:nm\_013242]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
9146.11\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
8743.98\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04599\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2267\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
splicing factor, arginine/serine-rich 8 (suppressor of white apricot protein homolog). [source:swissprot;acc:q12872]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2268\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eyes absent homolog 1. [source:swissprot;acc:q99502]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5785.08\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6051.03\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04597\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2269\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
upstream stimulatory factor 2 (upstream transcription factor 2) (fos-interacting protein) (fip) (major late transcription factor 2). [source:swissprot;acc:q15853]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6373.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6666.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04596\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2270\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
blood group rh(ce) polypeptide (rhesus c/e antigens) (rh30a) (rhixb) (rh polypeptide 1) (rhpi). [source:swissprot;acc:p18577]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6568.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6869.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0459\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2271\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
blood group rh(d) polypeptide (rhesus d antigen) (rhxiii) (rh polypeptide 2) (rhpii). [source:swissprot;acc:q02161]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6568.51\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6869.97\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04589\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2272\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
blood group rh(ce) polypeptide (rhesus c/e antigens) (rh30a) (rhixb) (rh polypeptide 1) (rhpi). [source:swissprot;acc:p18577]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2273\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
upstream stimulatory factor 1 (major late transcription factor 1). [source:swissprot;acc:p22415]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6374.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6667.06\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04587\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2274\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eyes absent homolog 3. [source:swissprot;acc:q99504]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5779.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6044.78\vspace{3pt}}&\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/