Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1875 to 1924 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1875\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent williams beuren syndrome critical region 20a isoform 2; nol1/nop2/sun gene family member; williams-beuren syndrome critical region protein 20 copy a; williams beuren syndrome chromosome region 20. [source:refseq;acc:nm\_018044]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 223.862\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 226.271\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01076\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1876\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent williams beuren syndrome chromosome region 20c isoform 1. [source:refseq;acc:nm\_032158]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1877\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleobindin 1 precursor (calnuc). [source:swissprot;acc:q02818]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 212.186\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 214.467\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01075\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1878\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna mismatch repair protein mlh1 (mutl protein homolog 1). [source:swissprot;acc:p40692]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1879\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleobindin 2 precursor (dna-binding protein nefa). [source:swissprot;acc:p80303]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1880\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytidine deaminase (ec 3.5.4.5) (cytidine aminohydrolase). [source:swissprot;acc:p32320]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.852\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 223.225\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01074\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1881\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dj850e9.1 (novel c2h2 type zinc finger protein similar to drosophila scratch (scrt), slug and xenopus snail) (fragment). [source:sptrembl;acc:q9nq03]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 210.592\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 208.355\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1882\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l28. [source:swissprot;acc:p46779]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.896\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 213.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0107\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1883\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 6-phosphofructokinase, type c (ec 2.7.1.11) (phosphofructokinase 1) (phosphohexokinase) (phosphofructo-1-kinase isozyme c) (pfk-c) (6-phosphofructokinase, platelet type). [source:swissprot;acc:q01813]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 240.317\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 242.881\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01067\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1884\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative gtp-binding protein ptd004 (pro2455). [source:swissprot;acc:q9ntk5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.081\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.373\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01066\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1885\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent arginase 1 (ec 3.5.3.1) (liver-type arginase). [source:swissprot;acc:p05089]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.615\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01064\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1886\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent arginase ii, mitochondrial precursor (ec 3.5.3.1) (non-hepatic arginase) (kidney-type arginase). [source:swissprot;acc:p78540]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.512\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.682\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01061\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1887\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sterile alpha and tir motif containing 1; sterile alpha and heat/armadillo motif protein, ortholog of drosophila. [source:refseq;acc:nm\_015077]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.896\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.577\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1888\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent immature colon carcinoma transcript 1 (digestion substraction 1) (ds- 1). [source:swissprot;acc:q14197]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.414\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 216.131\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01056\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1889\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rab3a interacting protein (rabin3)-like 1. [source:refseq;acc:nm\_013401]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 211.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 209.067\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01054\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1890\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rab3a interacting protein isoform alpha 1; rabin3; ssx2 interacting protein. [source:refseq;acc:nm\_022456]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 211.314\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 209.111\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1891\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna replication licensing factor mcm3 (dna polymerase alpha holoenzyme-associated protein p1) (rlf beta subunit) (p102 protein) (p1-mcm3). [source:swissprot;acc:p25205]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 233.828\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 231.395\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01051\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1892\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kelch-like ech-associated protein 1 (cytosolic inhibitor of nrf2). [source:swissprot;acc:q14145]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1893\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gdp-mannose pyrophosphorylase b isoform 1; mannose-1-phosphate guanylyltransferase; amphoterin induced gene 3. [source:refseq;acc:nm\_013334]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 222.842\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 225.17\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01045\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1894\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gdp-mannose pyrophosphorylase a; mannose-1-phosphate guanylyltransferase (gdp). [source:refseq;acc:nm\_013335]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1895\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adenylyl cyclase-associated protein 2 (cap 2). [source:swissprot;acc:p40123]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.853\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 213.639\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01036\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1896\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lim domain binding 2; lim binding domain 2; lim domain-binding factor-2. [source:refseq;acc:nm\_001290]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 199.883\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 197.835\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01035\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1897\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lim domain binding 1; carboxy terminal lim domain protein 2; lim domain-binding factor-1. [source:refseq;acc:nm\_003893]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1898\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lim/homeobox protein lhx4. [source:swissprot;acc:q969g2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 199.881\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 197.833\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1899\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lim/homeobox protein lhx3. [source:swissprot;acc:q9ubr4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 199.884\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 197.837\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1900\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 27 (fatty acid transporter), member 4; fatty acid transport protein 4. [source:refseq;acc:nm\_005094]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.401\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.38\vspace{3pt}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01034\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1901\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent delta(14)-sterol reductase (ec 1.3.1.70) (c-14 sterol reductase) (sterol c14-reductase) (delta14-sr) (transmembrane 7 superfamily member 2) (another new gene 1) (putative sterol reductase sr-1). [source:swissprot;acc:o76062]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 191.411\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 193.39\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1902\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lamin b receptor (integral nuclear envelope inner membrane protein) (lmn2r). [source:swissprot;acc:q14739]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1903\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 27 member 3; fatty acid transport protein 3. [source:refseq;acc:nm\_024330]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.406\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.385\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1904\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent very-long-chain acyl-coa synthetase (ec 6.2.1.-) (very-long-chain- fatty-acid-coa ligase). [source:swissprot;acc:o14975]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.424\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.404\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1905\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent disrupter of silencing 10. [source:refseq;acc:nm\_020368]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.411\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.39\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1906\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent very long-chain acyl-coa synthetase homolog 1. [source:refseq;acc:nm\_014031]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.389\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1907\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 27 (fatty acid transporter), member 5; very long-chain acyl-coa synthetase homolog 2; very long-chain acyl-coa synthetase-related protein; likely ortholog of mouse solute carrier family 27 (fatty acid transporter), member 5. [source:refseq;acc:nm\_012254]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.408\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.387\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1908\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent similar to cg7020 gene product (fragment). [source:sptrembl;acc:q96ib4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 191.415\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.394\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1909\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent calmegin precursor. [source:swissprot;acc:o14967]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 217.48\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 215.256\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01033\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1910\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent calnexin precursor (major histocompatibility complex class i antigen-binding protein p88) (p90) (ip90). [source:swissprot;acc:p27824]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1911\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent soluble liver antigen/liver pancreas antigen. [source:refseq;acc:nm\_153825]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1912\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna (guanine-7-) methyltransferase. [source:refseq;acc:nm\_003799]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1913\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phospholipid scramblase 3 (pl scramblase 3) (ca(2+)-dependent phospholipid scramblase 3). [source:swissprot;acc:q9nry6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 215.745\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 213.564\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01021\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1914\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phospholipid scramblase 4 (pl scramblase 4) (ca(2+)-dependent phospholipid scramblase 4). [source:swissprot;acc:q9nrq2]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1915\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phospholipid scramblase 2 (pl scramblase 2) (ca(2+)-dependent phospholipid scramblase 2). [source:swissprot;acc:q9nry7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.747\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 213.571\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01019\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1916\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rh type c glycoprotein. [source:refseq;acc:nm\_016321]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 196.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 198.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01016\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1917\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent p28 ing5. [source:refseq;acc:nm\_032329]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.848\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.039\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01015\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1918\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent endothelial-derived gene 1. [source:refseq;acc:nm\_025205]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 202.211\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 200.18\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1919\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent histidyl-trna synthetase homolog (ec 6.1.1.21) (histidine--trna ligase homolog) (hisrs). [source:swissprot;acc:p49590]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 187.231\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 185.349\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1920\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent histidyl-trna synthetase (ec 6.1.1.21) (histidine--trna ligase) (hisrs). [source:swissprot;acc:p12081]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 187.292\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 185.413\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01013\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1921\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5-methyltetrahydrofolate--homocysteine methyltransferase (ec 2.1.1.13) (methionine synthase, vitamin-b12 dependent) (ms). [source:swissprot;acc:q99707]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.607\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.386\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01012\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1922\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent centaurin gamma 2. [source:swissprot;acc:q9upq3]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 220.659\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.452\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0101\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1923\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent general vesicular transport factor p115 (transcytosis associated protein) (tap) (vesicle docking protein). [source:swissprot;acc:o60763]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1924\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent centaurin gamma 1. [source:swissprot;acc:q99490]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/