Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.
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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX
Showing element 1263 to 1312 of 8289 in total
Value Type: Measured
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
632\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
disks large-associated protein 2 (dap-2) (sap90/psd-95-associated protein 2) (sapap2) (psd-95/sap90 binding protein 2) (fragment). [source:swissprot;acc:q9p1a6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6228.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7013.19\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.126\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
estradiol 17 beta-dehydrogenase 7 (ec 1.1.1.62) (17-beta-hsd 7) (17- beta-hydroxysteroid dehydrogenase 7). [source:swissprot;acc:p56937]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8315.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8688.21\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04484\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
633\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ferritin light chain (ferritin l subunit). [source:swissprot;acc:p02792]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6228.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7013.19\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.126\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
tpa regulated locus; uncharacterized hypothalamus protein htmp. [source:refseq;acc:nm\_018475]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
8331.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8704.52\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0448\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
634\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ba526d8.2 (novel protein similar to kiaa1074). [source:sptrembl;acc:q9h560]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7262.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7587.85\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04479\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
disks large-associated protein 4 (dap-4) (sap90/psd-95-associated protein 4) (sapap4) (psd-95/sap90 binding protein 4). [source:swissprot;acc:q9y2h0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6228.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7013.19\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.126\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
635\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ankyrin repeat domain protein 7 (testis-specific protein tsa806). [source:swissprot;acc:q92527]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7262.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7587.39\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04479\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
ferritin heavy polypeptide-like 17. [source:swissprot;acc:q9bxu8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6228.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7013.53\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12595\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
636\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
breast cancer antigen ny-br-1. [source:refseq;acc:nm\_052997]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7262.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7587.97\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04478\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit alpha type 5 (ec 3.4.25.1) (proteasome zeta chain) (macropain zeta chain) (multicatalytic endopeptidase complex zeta chain). [source:swissprot;acc:p28066]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
5713.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6432.92\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12593\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
637\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
putative nucleoside diphosphate kinase (ec 2.7.4.6) (ndk) (ndp kinase). [source:swissprot;acc:o60361]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7756.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8731.76\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12573\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-conjugating enzyme e2 m (ec 6.3.2.19) (ubiquitin-protein ligase m) (ubiquitin carrier protein m) (nedd8-conjugating enzyme ubc12). [source:swissprot;acc:o76069]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8025.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8384.21\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04473\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
638\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
nucleoside diphosphate kinase a (ec 2.7.4.6) (ndk a) (ndp kinase a) (tumor metastatic process-associated protein) (metastasis inhibition factor nm23) (nm23-h1). [source:swissprot;acc:p15531]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7755.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8730.74\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12572\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
tryptophan 2,3-dioxygenase (ec 1.13.11.11) (tryptophan pyrrolase) (tryptophanase) (tryptophan oxygenase) (tryptamin 2,3-dioxygenase) (trpo). [source:swissprot;acc:p48775]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
7720\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8065.07\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0447\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
639\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
nucleolysin tiar (tia-1 related protein). [source:swissprot;acc:q01085]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7686.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8029.54\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04468\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
nucleoside diphosphate kinase b (ec 2.7.4.6) (ndk b) (ndp kinase b) (nm23-h2) (c-myc purine-binding transcription factor puf). [source:swissprot;acc:p22392]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
7753.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8728.13\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12569\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
640\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutathione s-transferase theta 2 (ec 2.5.1.18) (gst class-theta). [source:swissprot;acc:p30712]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
4811.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5414.64\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12547\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
membrane-associated nucleic acid binding protein. [source:refseq;acc:nm\_018835]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
6586.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6881.19\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04467\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
641\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cox15 homolog isoform 2 precursor; cytochrome c oxidase subunit 15; cytochrome c oxidase assembly protein. [source:refseq;acc:nm\_004376]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
8114.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8476.88\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04466\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
peroxisomal n1-acetyl-spermine/spermidine oxidase. [source:refseq;acc:nm\_152911]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
4810.85\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
5414.21\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.12542\vspace{3pt}}}\\\cline{1-2}\cline{5-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
642\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
atpase inhibitor, mitochondrial precursor. [source:swissprot;acc:q9uii2]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent
5414.23\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
heat-shock protein, beta-2 (hspb2) (dmpk-binding protein) (mkbp). [source:swissprot;acc:q16082]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
7448.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7781.27\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04465\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
643\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
brain protein 44-like protein (hspc040) (cgi-129) (pnas-115). [source:swissprot;acc:q9y5u8]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7652.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7993.59\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04464\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
polyamine oxidase isoform 1; polyamine oxidase; flavin-containing spermine oxidase; putative cyclin g1 interacting protein; flavin containing amine oxidase. [source:refseq;acc:nm\_019025]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
4810.85\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
5414.23\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.12542\vspace{3pt}}}\\\cline{1-2}\cline{5-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
644\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cytochrome c-type heme lyase (ec 4.4.1.17) (cchl) (holocytochrome c- type synthase). [source:swissprot;acc:p53701]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent
5414.22\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin carboxyl-terminal hydrolase 2 (ec 3.1.2.15) (ubiquitin thiolesterase 2) (ubiquitin-specific processing protease 2) (deubiquitinating enzyme 2) (41 kda ubiquitin-specific protease). [source:swissprot;acc:o75604]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7689.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8031.57\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04455\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
645\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutathione s-transferase theta 1 (ec 2.5.1.18) (gst class-theta) (glutathione transferase t1-1). [source:swissprot;acc:p30711]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4810.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5413.89\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12538\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
small glutamine-rich tetratricopeptide repeat-containing protein (vpu-binding protein) (ubp). [source:swissprot;acc:o43765]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
8632.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
9016.86\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04452\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
646\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
enoyl-coa hydratase, mitochondrial precursor (ec 4.2.1.17) (short chain enoyl-coa hydratase) (sceh) (enoyl-coa hydratase 1). [source:swissprot;acc:p30084]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7808.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8156\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04444\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
fibrillarin (34 kda nucleolar scleroderma antigen). [source:swissprot;acc:p22087]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
4019.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4522.61\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12506\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
647\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
short transient receptor potential channel 4 (trpc4) (trp-related protein 4) (htrp-4) (htrp4). [source:swissprot;acc:q9ubn4]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
5167.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4594.43\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12481\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc binding alcohol dehydrogenase, domain containing 1. [source:refseq;acc:nm\_152444]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
8714.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
9101.44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04442\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
648\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
nucleolysin tia-1 (rna-binding protein tia-1) (p40-tia-1) [contains: p15-tia-1]. [source:swissprot;acc:p31483]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7692.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8033.82\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04441\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
splicing factor 3a subunit 3 (spliceosome associated protein 61) (sap 61) (sf3a60). [source:swissprot;acc:q12874]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5248.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5901.72\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12455\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
649\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dnaj homolog subfamily a member 1 (heat shock 40 kda protein 4) (dnaj protein homolog 2) (hsj-2) (hsdj). [source:swissprot;acc:p31689]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8518.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8896.58\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04439\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
splicing factor 3 subunit 1 (spliceosome associated protein 114) (sap 114) (sf3a120). [source:swissprot;acc:q15459]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
5248.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5901.72\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12455\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
650\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
golgi reassembly stacking protein 2; golgi reassembly stacking protein 2, 55 kda. [source:refseq;acc:nm\_015530]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
8362.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
9402.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12435\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
protein strait11499. [source:swissprot;acc:q9npa3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8315.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8683.68\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04427\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
651\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ebp50-pdz interactor of 64 kda (epi64 protein). [source:swissprot;acc:q9bxi6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5168.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4597.44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1242\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vesicle-fusing atpase (ec 3.6.4.6) (vesicular-fusion protein nsf) (n- ethylmaleimide sensitive fusion protein) (nem-sensitive fusion protein). [source:swissprot;acc:p46459]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8478.16\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8852.82\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04419\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
652\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
short transient receptor potential channel 5 (trpc5) (htrp-5) (htrp5). [source:swissprot;acc:q9ul62]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5168.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4597.44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1242\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
xenotropic and polytropic retrovirus receptor. [source:refseq;acc:nm\_004736]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7476.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7807.07\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04417\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
653\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
methionyl-trna synthetase (ec 6.1.1.10) (methionine--trna ligase) (metrs). [source:swissprot;acc:p56192]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5560.06\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6248.27\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12378\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sad1/unc-84 protein-like 1. [source:swissprot;acc:o94901]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6996.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7305.01\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04416\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
654\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
histone h3.3 (h3.a) (h3.b) (h3.3q). [source:swissprot;acc:p06351]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4088.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4593.43\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12346\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/hydrogen exchanger 6 (na(+)/h(+) exchanger 6) (nhe-6). [source:swissprot;acc:q92581]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7171.77\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7488.23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04413\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
655\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj1099d15.1 (putative dnaj protein). [source:sptrembl;acc:q9h4j9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4088.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4593.43\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12346\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
senescence downregulated leo1-like. [source:refseq;acc:nm\_138792]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7171.77\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7488.23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04413\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
656\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
apolipoprotein a-i binding protein; apoa-i binding protein. [source:refseq;acc:nm\_144772]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6139.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6893.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.12293\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 9, member 7; nonselective sodium potassium/proton exchanger; sodium/hydrogen exchanger 7. [source:refseq;acc:nm\_032591]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7171.77\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7488.23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04413\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/