Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1051 to 1100 of 3228 in total 
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1051\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
17 beta-hydroxysteroid dehydrogenase. [source:sptrembl;acc:q13034]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
211.449\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
217.998\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03097\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1052\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
retinol dehydrogenase 8 (all-trans); photoreceptor outer segment all-trans retinol dehydrogenase. [source:refseq;acc:nm\_015725]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1053\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit alpha type 5 (ec 3.4.25.1) (proteasome zeta chain) (macropain zeta chain) (multicatalytic endopeptidase complex zeta chain). [source:swissprot;acc:p28066]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
207.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
200.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03087\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1054\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l21. [source:swissprot;acc:p46778]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
223.958\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.263\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03082\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1055\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hcv ns3-transactivated protein 1. [source:refseq;acc:nm\_019048]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
219.01\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
212.468\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03079\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1056\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase catalytic subunit a, ubiquitous isoform (ec 3.6.3.14) (v-atpase a subunit 1) (vacuolar proton pump alpha subunit 1) (v-atpase 69 kda subunit 1) (isoform va68). [source:swissprot;acc:p38606]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1057\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
asparagine synthetase [glutamine-hydrolyzing] (ec 6.3.5.4) (glutamine- dependent asparagine synthetase) (ts11 cell cycle control protein). [source:swissprot;acc:p08243]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1058\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ataxin 2 related protein isoform a; ataxin-2 domain protein. [source:refseq;acc:nm\_007245]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
228.105\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
221.293\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03078\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1059\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ataxin 2; olivopontocerebellar ataxia 2, autosomal dominant. [source:refseq;acc:nm\_002973]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1060\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nemo-like kinase; likely ortholog of mouse nemo like kinase. [source:refseq;acc:nm\_016231]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
218.162\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
211.648\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1061\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
elks protein. [source:refseq;acc:nm\_015064]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1062\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 174 (aw-1). [source:swissprot;acc:q15697]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
269.963\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
278.239\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03066\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1063\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger imprinted 2. [source:swissprot;acc:q9nzv7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
269.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
278.232\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03064\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1064\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 24 (zinc finger protein 191) (zinc finger protein kox17) (retinoic acid suppression protein a) (rsg-a). [source:swissprot;acc:p17028]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
269.955\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
278.221\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03062\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1065\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 305. [source:swissprot;acc:o43309]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
269.954\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
278.219\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1066\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 18 (zinc finger protein kox11) (fragment). [source:swissprot;acc:p17022]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
269.956\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
278.223\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1067\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 215 (bwscr2 associated zinc-finger protein 2) (baz 2). [source:swissprot;acc:q9ul58]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1068\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 274 (zinc finger protein sp2114) (zinc finger protein hfb101) (zinc finger protein zfp2) (zf2). [source:swissprot;acc:q96gc6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
269.953\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
278.215\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03061\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1069\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 232. [source:swissprot;acc:q9uny5]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
269.954\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
278.218\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1070\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 99. [source:refseq;acc:nm\_032164]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1071\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna-directed rna polymerase i 16 kda polypeptide (ec 2.7.7.6) (rpa16). [source:swissprot;acc:q9y2s0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
231.277\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
238.356\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1072\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 213 (putative transcription factor cr53). [source:swissprot;acc:o14771]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
269.954\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
278.217\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1073\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ww domain binding protein 2 (wbp-2). [source:swissprot;acc:q969t9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
216.901\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
210.485\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03048\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1074\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer beta' subunit (beta'-coat protein) (beta'-cop) (p102). [source:swissprot;acc:p35606]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
174.387\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
179.697\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03045\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1075\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer gamma subunit (gamma-coat protein) (gamma-cop). [source:swissprot;acc:q9y678]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1076\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer zeta-1 subunit (zeta-1 coat protein) (zeta-1 cop) (cgi-120) (hspc181). [source:swissprot;acc:q9y3c3]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1077\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer delta subunit (delta-coat protein) (delta-cop) (archain). [source:swissprot;acc:p48444]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1078\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
peptidyl-prolyl cis-trans isomerase e (ec 5.2.1.8) (ppiase e) (rotamase e) (cyclophilin e) (cyclophilin 33). [source:swissprot;acc:q9unp9]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1079\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer zeta-2 subunit (zeta-2 coat protein) (zeta-2 cop). [source:swissprot;acc:q9p299]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1080\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 444; endothelial zinc finger protein 2. [source:refseq;acc:nm\_018337]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
269.896\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
278.093\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03037\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1081\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s30. [source:swissprot;acc:q05472]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
223.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.875\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03027\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1082\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phafin 2; ph and fyve domain-containing protein 2. [source:refseq;acc:nm\_024613]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
220.118\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
213.685\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03011\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1083\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3-oxo-5-alpha-steroid 4-dehydrogenase 1 (ec 1.3.99.5) (steroid 5-alpha-reductase 1) (sr type 1) (s5ar). [source:swissprot;acc:p18405]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1084\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3-oxo-5-alpha-steroid 4-dehydrogenase 2 (ec 1.3.99.5) (steroid 5-alpha-reductase 2) (sr type 2) (5 alpha-sr2). [source:swissprot;acc:p31213]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1085\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dyskerin (nucleolar protein nap57) (cbf5 homolog). [source:swissprot;acc:o60832]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
231.007\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.864\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02968\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1086\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
similar to zinc finger protein 277. [source:sptrembl;acc:q8wwa6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
236.679\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
243.679\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02958\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1087\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 277. [source:swissprot;acc:q9nrm2]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1088\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
annexin a11 (annexin xi) (calcyclin-associated annexin 50) (cap-50) (56 kda autoantigen). [source:swissprot;acc:p50995]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
219.673\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.378\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0295\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1089\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage stimulation factor subunit 3; cleavage stimulation factor, 3' pre-rna, subunit 3, 77kd. [source:refseq;acc:nm\_001326]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
121.428\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
125.004\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02945\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1090\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
similar to ribosomal protein, large, p0. [source:sptrembl;acc:q96fq9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
226.218\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.88\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1091\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
block 23. [source:sptrembl;acc:q8nhw5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
226.205\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.858\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02941\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1092\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s acidic ribosomal protein p0 (l10e). [source:swissprot;acc:p05388]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
226.203\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.855\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1093\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer alpha subunit (alpha-coat protein) (alpha-cop) (hepcop) (hep-cop) [contains: xenin (xenopsin-related peptide); proxenin]. [source:swissprot;acc:p53621]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
177.432\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
182.647\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02939\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1094\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
annexin a7 (annexin vii) (synexin). [source:swissprot;acc:p20073]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
219.655\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.385\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02938\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1095\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial gtp binding protein isoform v. [source:refseq;acc:nm\_032620]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
213.552\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.463\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02935\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1096\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nadh-ubiquinone oxidoreductase b22 subunit (ec 1.6.5.3) (ec 1.6.99.3) (complex i-b22) (ci-b22). [source:swissprot;acc:q9y6m9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
212.345\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
206.339\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.02911\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1097\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
probable calcium-transporting atpase kiaa0703 (ec 3.6.3.8). [source:swissprot;acc:o75185]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
209.123\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
203.208\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1098\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 3 mu 1 subunit (mu-adaptin 3a) (ap-3 adapter complex mu3a subunit). [source:swissprot;acc:q9y2t2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.323\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.185\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02906\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1099\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 3 mu 2 subunit (clathrin coat assembly protein ap47 homolog 2) (clathrin coat associated protein ap47 homolog 2) (golgi adaptor ap-1 47 kda protein homolog 2) (ha1 47 kda subunit homolog 2) (clathrin assembly protein assembly protein complex 1 medium chain homolog 2) (p47b). [source:swissprot;acc:p53677]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.315\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.183\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02904\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1100\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
calcium-transporting atpase type 2c, member 1 (ec 3.6.3.8) (atpase 2c1) (atp-dependent ca(2+) pump pmr1) (hussy-28). [source:swissprot;acc:p98194]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
209.052\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
203.183\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02889\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/