Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 844 to 893 of 3228 in total 
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
844\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
c-type lectin superfamily member 1 precursor (cartilage-derived c-type lectin). [source:swissprot;acc:o75596]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
178.033\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
170.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04223\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
845\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u6 snrna-associated sm-like protein lsm1 (small nuclear ribonuclear casm) (cancer-associated sm-like). [source:swissprot;acc:o15116]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
228.599\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
219.399\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04193\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
846\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
methyltransferase like 2. [source:refseq;acc:nm\_018396]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
147.211\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
153.371\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04184\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
847\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cytoplasmic dynein light chain (t-complex testis-specific protein 1 homolog) (protein cw-1). [source:swissprot;acc:q15763]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
848\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fzr1 protein; fizzy-related protein; cdc20-like 1b. [source:refseq;acc:nm\_016263]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
849\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
proprotein convertase subtilisin/kexin type 5 precursor (ec 3.4.21.-) (proprotein convertase pc5) (subtilisin/kexin-like protease pc5) (convertase pc5) (pc6) (hpc6). [source:swissprot;acc:q92824]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
850\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specific factor 4, 30kd subunit; cleavage-polyadenylation specificity factor, 30kd; no arches-like (zebrafish) zinc finger protein; cleavage-polyadenylation specificity factor. [source:refseq;acc:nm\_006693]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
107.842\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
112.329\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04161\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
851\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
trs85 homolog. [source:swissprot;acc:q9y2l5]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
852\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hypoxanthine-guanine phosphoribosyltransferase (ec 2.4.2.8) (hgprt) (hgprtase). [source:swissprot;acc:p00492]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
193.114\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
185.412\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04154\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
853\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
wd-repeat protein wdc146. [source:swissprot;acc:q9c0j8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
108.289\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
112.772\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0414\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
854\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 160 kda subunit (cpsf 160 kda subunit). [source:swissprot;acc:q10570]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
855\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tetranectin precursor (tn) (plasminogen-kringle 4 binding protein). [source:swissprot;acc:p05452]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
178.514\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
171.42\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04138\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
856\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
xenotropic and polytropic retrovirus receptor. [source:refseq;acc:nm\_004736]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
215.028\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
206.623\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04068\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
857\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
putatative 28 kda protein. [source:refseq;acc:nm\_020143]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
227.241\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
236.467\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0406\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
858\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
syntaxin 12. [source:refseq;acc:nm\_177424]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.446\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
208.997\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04043\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
859\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l39. [source:swissprot;acc:p02404]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
234.025\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
224.958\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04031\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
860\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l18a. [source:swissprot;acc:q02543]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
861\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s19. [source:swissprot;acc:p39019]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
862\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l31. [source:swissprot;acc:p12947]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
863\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
casein kinase ii, alpha chain (ck ii) (ec 2.7.1.37). [source:swissprot;acc:p19138]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
240.194\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
230.957\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03999\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
864\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
casein kinase ii, alpha' chain (ck ii) (ec 2.7.1.37). [source:swissprot;acc:p19784]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
865\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription factor btf3 (rna polymerase b transcription factor 3). [source:swissprot;acc:p20290]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
211.961\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
203.814\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03997\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
866\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal recognition particle 68 kda protein (srp68). [source:swissprot;acc:q9uhb9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
221.306\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.806\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03994\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
867\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s3a. [source:swissprot;acc:p49241]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
225.689\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
234.674\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03981\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
868\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
diphosphomevalonate decarboxylase (ec 4.1.1.33) (mevalonate pyrophosphate decarboxylase) (mevalonate (diphospho)decarboxylase). [source:swissprot;acc:p53602]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
233.298\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
242.571\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03975\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
869\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
exocyst complex component sec8. [source:swissprot;acc:q96a65]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.762\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
209.449\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03969\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
870\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription factor btf3 homolog 3. [source:swissprot;acc:q13892]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
211.908\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
203.832\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03962\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
871\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 100 kda subunit (cpsf 100 kda subunit) (fragment). [source:swissprot;acc:q9p2i0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
110.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
114.552\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03949\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
872\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein k (hnrnp k) (dc-stretch binding protein) (csbp) (transformation upregulated nuclear protein) (tunp). [source:swissprot;acc:q07244]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
224.413\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
233.272\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03948\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
873\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u4/u6 small nuclear ribonucleoprotein prp4 (u4/u6 snrnp 60 kda protein) (wd splicing factor prp4) (hprp4). [source:swissprot;acc:o43172]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
874\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-1 subunit (ampk gamma-1 chain) (ampkg). [source:swissprot;acc:p54619]\vspace{3pt}}&\multirow{7}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
212.002\vspace{3pt}}}&\multirow{7}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
203.954\vspace{3pt}}}&\multirow{7}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03946\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
875\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, catalytic alpha-2 chain (ec 2.7.1.-) (ampk alpha-2 chain). [source:swissprot;acc:p54646]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
876\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, catalytic alpha-1 chain (ec 2.7.1.-) (ampk alpha-1 chain). [source:swissprot;acc:q13131]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
877\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, beta-2 subunit (ampk beta-2 chain). [source:swissprot;acc:o43741]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
878\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-3 subunit (ampk gamma-3 chain) (ampk gamma3). [source:swissprot;acc:q9ugi9]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
879\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, beta-1 subunit (ampk beta-1 chain) (ampkb). [source:swissprot;acc:q9y478]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
880\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-2 subunit (ampk gamma-2 chain) (ampk gamma2) (h91620p). [source:swissprot;acc:q9ugj0]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
881\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
l-myc-1 proto-oncogene protein. [source:swissprot;acc:p12524]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
227.604\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
219.001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03928\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
882\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
n-myc proto-oncogene protein. [source:swissprot;acc:p04198]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
227.601\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
219.008\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03924\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
883\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ga binding protein alpha chain (gabp-alpha subunit) (transcription factor e4tf1-60) (nuclear respiratory factor-2 subunit alpha). [source:swissprot;acc:q06546]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
227.596\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
219.017\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03917\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
884\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ga binding protein beta-2 chain (gabp-beta-2 subunit) (transcription factor e4tf1-47) (gapbp-2) (nuclear respiratory factor-2 subunit gamma). [source:swissprot;acc:q06545]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
885\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nadh-ubiquinone oxidoreductase 23 kda subunit, mitochondrial precursor (ec 1.6.5.3) (ec 1.6.99.3) (complex i-23kd) (ci-23kd) (tyky subunit). [source:swissprot;acc:o00217]\vspace{3pt}}&&&\\\cline{1-2}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
886\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
elongation of very long chain fatty acids protein 1 (cgi-88). [source:swissprot;acc:q9bw60]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
219.018\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
887\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transducin beta-like 3; wd-repeat protein sazd. [source:refseq;acc:nm\_006453]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
244.155\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
234.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03913\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
888\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nascent-polypeptide-associated complex alpha polypeptide. [source:refseq;acc:nm\_005594]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
212.027\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03909\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
889\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
alpha-nac protein. [source:sptrembl;acc:q9h009]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
212.028\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.053\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03908\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
890\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
syntaxin 7. [source:swissprot;acc:o15400]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.181\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
209.012\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
891\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
small gtp-binding tumor suppressor 1. [source:refseq;acc:nm\_145173]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
212.028\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
204.055\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03907\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
892\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
di-ras2. [source:refseq;acc:nm\_017594]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
893\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
myc proto-oncogene protein (c-myc). [source:swissprot;acc:p01106]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
227.585\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
219.037\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03903\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/