Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Value Type description Rank Gene Interaction Map Network Comparison Type Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 712 to 761 of 3228 in total 
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytochrome p450 4f8 (ec 1.14.14.1) (cypivf8). [source:swissprot;acc:p98187]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1288\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6120.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5655.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08218\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytohesin 1 (sec7 homolog b2-1). [source:swissprot;acc:q15438]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
221\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
33356.5\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
41482.5\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.24361\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
cytohesin 2 (arf nucleotide-binding site opener) (arno protein) (arf exchange factor). [source:swissprot;acc:q99418]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
222\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
224\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
cytohesin 4. [source:swissprot;acc:q9uia0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
223\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytokine-like nuclear factor n-pac. [source:refseq;acc:nm\_032569]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1147\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6837.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6281.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08858\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic antiproteinase 2 (cap2) (cap-2) (protease inhibitor 8) (serpin b8). [source:swissprot;acc:p50452]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2410\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5275.76\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5078.5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03884\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic antiproteinase 3 (cap3) (cap-3) (protease inhibitor 9) (serpin b9). [source:swissprot;acc:p50453]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2404\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic cysteine conjugate-beta lyase; glutamine-phenylpyruvate aminotransferase. [source:refseq;acc:nm\_004059]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2413\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7223.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6956.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03836\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic dynein light chain (t-complex testis-specific protein 1 homolog) (protein cw-1). [source:swissprot;acc:q15763]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
732\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11864\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
13241.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1161\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic polyadenylation element binding protein 3. [source:refseq;acc:nm\_014912]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
13\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
1281.5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
398.5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
3.21581\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic polyadenylation element binding protein 4. [source:refseq;acc:nm\_030627]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
12\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic protein nck1 (nck adaptor protein 1) (sh2/sh3 adaptor protein nck-alpha). [source:swissprot;acc:p16333]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
892\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7475.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6784.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10182\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytoplasmic protein nck2 (nck adaptor protein 2) (sh2/sh3 adaptor protein nck-beta) (nck-2). [source:swissprot;acc:o43639]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
847\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7485.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6776.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10458\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytoskeleton related vitamin a responsive protein; glutamate transporter eeac1-associated protein; dermal papilla derived protein 11; putative mapk activating protein pm27. [source:refseq;acc:nm\_006407]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2654\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7055.43\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7118.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0089\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
cytosolic nonspecific dipeptidase (glutamate carboxypeptidase-like protein 1). [source:swissprot;acc:q96kp4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1285\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6718.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6207.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08234\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
d(4) dopamine receptor (d(2c) dopamine receptor). [source:swissprot;acc:p21917]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1880\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6463.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6076.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0636\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
d-3-phosphoglycerate dehydrogenase (ec 1.1.1.95) (3-pgdh). [source:swissprot;acc:o43175]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1101\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6690.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6133.83\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0907\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dab2 interacting protein; ngap-like protein; doc-2/dab2 interactive protein. [source:refseq;acc:nm\_032552]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
11\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1281.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
398.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
3.21581\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dachshund homolog isoform a. [source:refseq;acc:nm\_080759]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2847\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
daz associated protein 1 isoform b; deleted in azoospermia associated protein 1. [source:refseq;acc:nm\_018959]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1239\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6132.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5654.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08457\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
db83 protein. [source:swissprot;acc:p57088]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
8\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
339.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1153.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
3.39764\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dc11 protein. [source:refseq;acc:nm\_020186]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1908\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7287.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6858.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06246\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dc12 protein. [source:refseq;acc:nm\_020187]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2774\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dead (asp-glu-ala-asp) box polypeptide 31 isoform 1; dead/dexh helicase ddx31. [source:refseq;acc:nm\_022779]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
431\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4431.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3849.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.15102\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dead (asp-glu-ala-asp) box polypeptide 39 isoform 1; nuclear rna helicase, decd variant of dead box family. [source:refseq;acc:nm\_005804]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
777\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6533.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5874.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11211\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dead (asp-glu-ala-asp) box polypeptide 47; hqp0256 protein. [source:refseq;acc:nm\_016355]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2284\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6048.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5783.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04585\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dead-box protein 4 (vasa homolog). [source:swissprot;acc:q9nqi0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
990\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5641.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5147.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09584\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dead-box protein abstrakt homolog. [source:swissprot;acc:q9ujv9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2033\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6449.87\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6101.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05716\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dead-box protein. [source:refseq;acc:nm\_018665]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1064\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6248.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5719.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0926\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dead/h (asp-glu-ala-asp/his) box polypeptide 11; dead/h box-11 (chl1-related helicase gene-1); yeast chl1 homolog. [source:refseq;acc:nm\_030655]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2497\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7192.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7002.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02713\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
defender against cell death 1 (dad-1). [source:swissprot;acc:p46966]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2391\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6579.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6327.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03987\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
deformed epidermal autoregulatory factor 1 homolog (nuclear deaf-1 related transcriptional regulator) (nudr) (suppressin) (zinc finger mynd domain containing protein 5). [source:swissprot;acc:o75398]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2584\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4253.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4180.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0175\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dehydrodolichyl diphosphate synthase. [source:refseq;acc:nm\_024887]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1280\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6874.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6350.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08252\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
delta 1-pyrroline-5-carboxylate synthetase (p5cs) [includes: glutamate 5-kinase (ec 2.7.2.11) (gamma-glutamyl kinase) (gk); gamma-glutamyl phosphate reductase (gpr) (ec 1.2.1.41) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase)]. [source:swissprot;acc:p54886]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1488\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5991.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5573.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07499\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
delta(14)-sterol reductase (ec 1.3.1.70) (c-14 sterol reductase) (sterol c14-reductase) (delta14-sr) (transmembrane 7 superfamily member 2) (another new gene 1) (putative sterol reductase sr-1). [source:swissprot;acc:o76062]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2309\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7273.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6960.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04493\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
delta-aminolevulinic acid dehydratase (ec 4.2.1.24) (porphobilinogen synthase) (aladh). [source:swissprot;acc:p13716]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1158\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5972.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5489.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08797\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
delta-interacting protein a (hepatitis delta antigen interacting protein a). [source:swissprot;acc:q15834]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1410\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6760.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6274.62\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07748\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
delta-sarcoglycan (sg-delta) (35 kda dystrophin-associated glycoprotein) (35dag). [source:swissprot;acc:q92629]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
738\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6434.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11554\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
delta3,5-delta2,4-dienoyl-coa isomerase, mitochondrial precursor (ec 5.3.3.-). [source:swissprot;acc:q13011]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1019\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6340.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5791.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0948\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
deltex 2. [source:refseq;acc:nm\_020892]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
54\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
2651.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1618.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.63814\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
deltex homolog 1; hdx-1. [source:refseq;acc:nm\_004416]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
55\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
2662.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1629.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.63399\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dendritic cell protein. [source:refseq;acc:nm\_006360]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
715\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7364.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6593.17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.117\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
density-regulated protein (drp) (drp1 protein) (smooth muscle cell associated protein-3) (smap-3). [source:swissprot;acc:o43583]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1589\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3360.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3600.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07162\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
deoxycytidylate deaminase (ec 3.5.4.12) (dcmp deaminase). [source:swissprot;acc:p32321]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2148\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4892.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4644.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05328\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
deoxyhypusine synthase (ec 2.5.1.46) (dhs). [source:swissprot;acc:p49366]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1493\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6606.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6146.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07482\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
deoxyribonuclease ii beta isoform 1 precursor; deoxyribonuclease ii beta; endonuclease dlad. [source:refseq;acc:nm\_021233]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
324\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
33457.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
28136.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.18912\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial precursor (ec 3.6.1.23) (dutpase) (dutp pyrophosphatase). [source:swissprot;acc:p33316]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
567\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
9043.51\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10264.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.13506\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
destrin (actin-depolymerizing factor) (adf). [source:swissprot;acc:p18282]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1948\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6608.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6230.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06074\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
developmentally regulated gtp-binding protein 1 (drg 1). [source:swissprot;acc:q9y295]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2762\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/