Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.
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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX
Showing element 2080 to 2129 of 6456 in total
Value Type: Ranked
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1040\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
t-complex protein 1, epsilon subunit (tcp-1-epsilon) (cct-epsilon). [source:swissprot;acc:p48643]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
163.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
168.359\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03136\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1041\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
3-oxo-5-alpha-steroid 4-dehydrogenase 2 (ec 1.3.99.5) (steroid 5-alpha-reductase 2) (sr type 2) (5 alpha-sr2). [source:swissprot;acc:p31213]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
220.118\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.685\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.433\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein l (hnrnp l). [source:swissprot;acc:p14866]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
186.774\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
181.099\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03134\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1042\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
estrogen-related receptor gamma (estrogen receptor related protein 3) (err gamma-2). [source:swissprot;acc:o75454]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
186.799\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
181.127\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03132\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
ww domain binding protein 2 (wbp-2). [source:swissprot;acc:q969t9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.901\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
210.485\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.416\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1043\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
1-acyl-sn-glycerol-3-phosphate acyltransferase gamma (ec 2.3.1.51) (1- agp acyltransferase 3) (1-agpat 3) (lysophosphatidic acid acyltransferase-gamma) (lpaat-gamma) (1-acylglycerol-3-phosphate o- acyltransferase 3). [source:swissprot;acc:q9nrz7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
187.834\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
182.137\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03128\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
nucleolar protein nop5 (nucleolar protein 5) (nop58) (hspc120). [source:swissprot;acc:q9y2x3]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.219\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
232.837\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.382\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1044\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
activator of camp-responsive element modulator (crem) in testis; lim protein act. [source:refseq;acc:nm\_020482]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
269.157\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
275.531\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.374\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
t-complex associated-testis-expressed 1-like (protein 91/23). [source:swissprot;acc:p51808]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
173.475\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
178.889\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03121\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1045\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cystathionine beta-synthase (ec 4.2.1.22) (serine sulfhydrase) (beta-thionase). [source:swissprot;acc:p35520]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.632\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.266\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.366\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
fip1-like 1; rearranged in hypereosinophilia. [source:refseq;acc:nm\_030917]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
115.817\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
119.432\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.03121\vspace{3pt}}}\\\cline{1-2}\cline{4-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1046\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
double-strand break repair protein mre11a (mre11 homolog 1). [source:swissprot;acc:p49959]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
173.475\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
178.889\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
transforming protein rhoc (h9). [source:swissprot;acc:p08134]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.632\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.266\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.366\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1047\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
steroid hormone receptor err1 (estrogen-related receptor, alpha) (err-alpha) (estrogen receptor-like 1). [source:swissprot;acc:p11474]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
187.022\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
181.391\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03104\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
thiosulfate sulfurtransferase (ec 2.8.1.1) (rhodanese). [source:swissprot;acc:q16762]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.632\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.266\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.366\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1048\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
1-acyl-sn-glycerol-3-phosphate acyltransferase delta (ec 2.3.1.51) (1- agp acyltransferase 4) (1-agpat 4) (lysophosphatidic acid acyltransferase-delta) (lpaat-delta) (1-acylglycerol-3-phosphate o- acyltransferase 4). [source:swissprot;acc:q9nrz5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
187.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
182.308\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.031\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
3-mercaptopyruvate sulfurtransferase (ec 2.8.1.2) (mst). [source:swissprot;acc:p25325]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.632\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.266\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.366\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1049\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adenine phosphoribosyltransferase (ec 2.4.2.7) (aprt). [source:swissprot;acc:p07741]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.449\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
217.998\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03097\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
transforming protein rhoa (h12). [source:swissprot;acc:p06749]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.632\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
199.266\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.366\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1050\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
bystin. [source:swissprot;acc:q13895]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
239.505\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
233.185\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.32\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
estradiol 17 beta-dehydrogenase 1 (ec 1.1.1.62) (17-beta-hsd 1) (placental 17-beta-hydroxysteroid dehydrogenase) (20 alpha- hydroxysteroid dehydrogenase) (20-alpha-hsd) (e2dh). [source:swissprot;acc:p14061]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
211.449\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
217.998\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.03097\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1051\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
17 beta-hydroxysteroid dehydrogenase. [source:sptrembl;acc:q13034]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
annexin a11 (annexin xi) (calcyclin-associated annexin 50) (cap-50) (56 kda autoantigen). [source:swissprot;acc:p50995]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
219.673\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.378\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.295\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1052\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
lysyl-trna synthetase (ec 6.1.1.6) (lysine--trna ligase) (lysrs). [source:swissprot;acc:q15046]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
220.291\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.584\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.293\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
retinol dehydrogenase 8 (all-trans); photoreceptor outer segment all-trans retinol dehydrogenase. [source:refseq;acc:nm\_015725]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.449\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
217.998\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03097\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1053\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
annexin a7 (annexin vii) (synexin). [source:swissprot;acc:p20073]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
219.655\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.385\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.27\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit alpha type 5 (ec 3.4.25.1) (proteasome zeta chain) (macropain zeta chain) (multicatalytic endopeptidase complex zeta chain). [source:swissprot;acc:p28066]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
200.84\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03087\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1054\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l21. [source:swissprot;acc:p46778]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
223.958\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
217.263\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03082\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit alpha type 5 (ec 3.4.25.1) (proteasome zeta chain) (macropain zeta chain) (multicatalytic endopeptidase complex zeta chain). [source:swissprot;acc:p28066]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
200.84\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.2\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1055\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
hcv ns3-transactivated protein 1. [source:refseq;acc:nm\_019048]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
219.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
212.468\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03079\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
hira-interacting protein 5 (cgi-33). [source:swissprot;acc:q9ums0]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
138.705\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
132.538\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.167\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1056\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
methyltransferase like 2. [source:refseq;acc:nm\_018396]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
147.211\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
153.371\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.16\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase catalytic subunit a, ubiquitous isoform (ec 3.6.3.14) (v-atpase a subunit 1) (vacuolar proton pump alpha subunit 1) (v-atpase 69 kda subunit 1) (isoform va68). [source:swissprot;acc:p38606]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
219.01\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
212.468\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.03079\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1057\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
asparagine synthetase [glutamine-hydrolyzing] (ec 6.3.5.4) (glutamine- dependent asparagine synthetase) (ts11 cell cycle control protein). [source:swissprot;acc:p08243]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
cytoplasmic dynein light chain (t-complex testis-specific protein 1 homolog) (protein cw-1). [source:swissprot;acc:q15763]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
147.211\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
153.371\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.16\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1058\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ataxin 2 related protein isoform a; ataxin-2 domain protein. [source:refseq;acc:nm\_007245]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
228.105\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
221.293\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03078\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
fzr1 protein; fizzy-related protein; cdc20-like 1b. [source:refseq;acc:nm\_016263]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
147.211\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
153.371\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.16\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1059\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ataxin 2; olivopontocerebellar ataxia 2, autosomal dominant. [source:refseq;acc:nm\_002973]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
228.105\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
221.293\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03078\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
proprotein convertase subtilisin/kexin type 5 precursor (ec 3.4.21.-) (proprotein convertase pc5) (subtilisin/kexin-like protease pc5) (convertase pc5) (pc6) (hpc6). [source:swissprot;acc:q92824]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
147.211\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
153.371\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.16\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1060\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
nemo-like kinase; likely ortholog of mouse nemo like kinase. [source:refseq;acc:nm\_016231]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.162\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
211.648\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03078\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
septin 6. [source:swissprot;acc:q14141]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
126.604\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
120.463\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.141\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1061\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 3 mu 1 subunit (mu-adaptin 3a) (ap-3 adapter complex mu3a subunit). [source:swissprot;acc:q9y2t2]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
217.323\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
211.185\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.138\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
elks protein. [source:refseq;acc:nm\_015064]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.162\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
211.648\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03078\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1062\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
brain protein 44. [source:swissprot;acc:o95563]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
126.215\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
120.078\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.137\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 174 (aw-1). [source:swissprot;acc:q15697]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
269.963\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
278.239\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03066\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1063\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
septin 7 (cdc10 protein homolog). [source:swissprot;acc:q16181]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
126.215\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
120.078\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.137\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger imprinted 2. [source:swissprot;acc:q9nzv7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
269.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
278.232\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03064\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1064\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 3 mu 2 subunit (clathrin coat assembly protein ap47 homolog 2) (clathrin coat associated protein ap47 homolog 2) (golgi adaptor ap-1 47 kda protein homolog 2) (ha1 47 kda subunit homolog 2) (clathrin assembly protein assembly protein complex 1 medium chain homolog 2) (p47b). [source:swissprot;acc:p53677]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.315\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
211.183\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.132\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 24 (zinc finger protein 191) (zinc finger protein kox17) (retinoic acid suppression protein a) (rsg-a). [source:swissprot;acc:p17028]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
269.955\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
278.221\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03062\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1065\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
septin 10 isoform 1. [source:refseq;acc:nm\_144710]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
125.526\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
119.402\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6.124\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/