Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Value Type description Rank Gene Interaction Map Network Comparison Type Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 58 to 107 of 3228 in total 
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
3-oxo-5-alpha-steroid 4-dehydrogenase 2 (ec 1.3.99.5) (steroid 5-alpha-reductase 2) (sr type 2) (5 alpha-sr2). [source:swissprot;acc:p31213]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1275\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6371.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5885\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08261\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
3-phosphoinositide dependent protein kinase-1 (ec 2.7.1.37) (hpdk1). [source:swissprot;acc:o15530]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2547\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3444.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3370.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02187\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
38 kda fk-506 binding protein homolog (fkbpr38) (fk506-binding protein 8). [source:swissprot;acc:q14318]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2261\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6786.23\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6486.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04615\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
4-aminobutyrate aminotransferase, mitochondrial precursor (ec 2.6.1.19) (gamma-amino-n-butyrate transaminase) (gaba transaminase) (gaba aminotransferase) (gaba-at) (gaba-t). [source:swissprot;acc:p80404]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1469\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5887.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5473.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07571\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s11. [source:swissprot;acc:p04643]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1873\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3402.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3618.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0636\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s13. [source:swissprot;acc:q02546]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1498\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5818.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5414.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07456\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s14 (pro2640). [source:swissprot;acc:p06366]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2436\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3584.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3708.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03465\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s15 (rig protein). [source:swissprot;acc:p11174]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2067\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3411.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3602.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05616\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s15a. [source:swissprot;acc:p39027]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2008\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3435.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3637.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05876\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s16. [source:swissprot;acc:p17008]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2448\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3611.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3730.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03309\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s18 (ke-3) (ke3). [source:swissprot;acc:p25232]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2437\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3584.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3708.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03465\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s19. [source:swissprot;acc:p39019]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
807\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5226.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4708.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11003\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s2 (s4) (llrep3 protein). [source:swissprot;acc:p15880]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2242\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3504.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3670.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04723\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s20. [source:swissprot;acc:p17075]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2211\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3422.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3590.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04907\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s21. [source:swissprot;acc:p35265]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2403\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5275.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5078.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03884\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s23. [source:swissprot;acc:p39028]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2152\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3381.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3560.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05302\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s24 (s19). [source:swissprot;acc:p16632]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1599\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5554.97\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5184.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07147\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s26. [source:swissprot;acc:p02383]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1655\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5131.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5488.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06953\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s27 (metallopan-stimulin 1) (mps-1). [source:swissprot;acc:p42677]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2126\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5066.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4806.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05422\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s28. [source:swissprot;acc:p25112]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
700\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8015.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7161.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11936\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s29. [source:swissprot;acc:p30054]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1756\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3357.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3582.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.067\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s3. [source:swissprot;acc:p23396]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2235\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3508.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3674.29\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04736\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s30. [source:swissprot;acc:q05472]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1145\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6416.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5893.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08858\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s3a. [source:swissprot;acc:p49241]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2263\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5145.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4918.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0461\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s4, x isoform (single copy abundant mrna protein) (scr10). [source:swissprot;acc:p12750]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1974\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3470.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3678.62\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05993\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s4, y isoform 2. [source:swissprot;acc:q8td47]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1967\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3470.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3678.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05994\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s5. [source:swissprot;acc:p46782]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2343\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3516.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3672.17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04413\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s7 (s8). [source:swissprot;acc:p23821]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1642\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6186.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5782.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06977\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s8. [source:swissprot;acc:p09058]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1471\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6087.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5659.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07564\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein s9. [source:swissprot;acc:p46781]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2628\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3877.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3933.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0146\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
40s ribosomal protein sa (p40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) (nem/1chd4) (multidrug resistance- associated protein mgr1-ag). [source:swissprot;acc:p08865]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2402\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5275.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5078.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03884\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
43 kda receptor-associated protein of the synapse (rapsyn) (acetylcholine receptor-associated 43 kda protein) (43 kda postsynaptic protein). [source:swissprot;acc:q13702]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1402\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6640.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6160.06\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07804\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
44050 protein. [source:refseq;acc:nm\_178832]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
376\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
14889.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
17385.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.16769\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
45 kda calcium-binding protein precursor (cab45) (stromal cell-derived factor 4) (sdf-4). [source:swissprot;acc:q9brk5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
972\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8570.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7813.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09684\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, beta-1 subunit (ampk beta-1 chain) (ampkb). [source:swissprot;acc:q9y478]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
691\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7747.63\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6920.69\vspace{3pt}}}&\multirow{7}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.11949\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, beta-2 subunit (ampk beta-2 chain). [source:swissprot;acc:o43741]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
689\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, catalytic alpha-1 chain (ec 2.7.1.-) (ampk alpha-1 chain). [source:swissprot;acc:q13131]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
688\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7747.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6920.67\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, catalytic alpha-2 chain (ec 2.7.1.-) (ampk alpha-2 chain). [source:swissprot;acc:p54646]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
687\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7747.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6920.71\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-1 subunit (ampk gamma-1 chain) (ampkg). [source:swissprot;acc:p54619]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
686\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7747.63\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6920.69\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-2 subunit (ampk gamma-2 chain) (ampk gamma2) (h91620p). [source:swissprot;acc:q9ugj0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
692\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5'-amp-activated protein kinase, gamma-3 subunit (ampk gamma-3 chain) (ampk gamma3). [source:swissprot;acc:q9ugi9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
690\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5'-methylthioadenosine phosphorylase (ec 2.4.2.28) (mta phosphorylase) (mtapase). [source:swissprot;acc:q13126]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1606\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5606.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5232.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07138\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5,6-dihydroxyindole-2-carboxylic acid oxidase precursor (ec 1.14.18.-) (dhica oxidase) (tyrosinase-related protein 1) (trp-1) (trp1) (trp) (catalase b) (glycoprotein-75) (melanoma antigen gp75). [source:swissprot;acc:p17643]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1229\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6509.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5998.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08519\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5-aminolevulinic acid synthase, erythroid-specific, mitochondrial precursor (ec 2.3.1.37) (delta-aminolevulinate synthase) (delta-ala synthetase) (alas-e). [source:swissprot;acc:p22557]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1910\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7287.27\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6858.84\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.06246\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
5-aminolevulinic acid synthase, nonspecific, mitochondrial precursor (ec 2.3.1.37) (delta-aminolevulinate synthase) (delta-ala synthetase) (alas-h). [source:swissprot;acc:p13196]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1915\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5-formyltetrahydrofolate cyclo-ligase (ec 6.3.3.2) (5,10-methenyl- tetrahydrofolate synthetase) (methenyl-thf synthetase) (mthfs). [source:swissprot;acc:p49914]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1833\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6572.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6175.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06439\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
5-methyltetrahydrofolate--homocysteine methyltransferase (ec 2.1.1.13) (methionine synthase, vitamin-b12 dependent) (ms). [source:swissprot;acc:q99707]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1115\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6314.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5795.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08957\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
54 kda nuclear rna- and dna-binding protein (p54(nrb)) (p54nrb) (55 kda nuclear protein) (nmt55) (non-pou domain-containing octamer- binding protein) (dna-binding p52/p100 complex, 52 kda subunit). [source:swissprot;acc:q15233]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2028\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
9686.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10243.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05746\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-phosphofructokinase, liver type (ec 2.7.1.11) (phosphofructokinase 1) (phosphohexokinase) (phosphofructo-1-kinase isozyme b) (pfk-b). [source:swissprot;acc:p17858]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
764\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4729.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4250.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11269\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
6-phosphofructokinase, muscle type (ec 2.7.1.11) (phosphofructokinase 1) (phosphohexokinase) (phosphofructo-1-kinase isozyme a) (pfk-a) (phosphofructokinase-m). [source:swissprot;acc:p08237]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
763\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4729.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4250.54\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11272\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/