Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Value Type description Rank Gene Interaction Map Network Comparison Type Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 2675 to 2724 of 3228 in total 
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 3 subunit 1 (spliceosome associated protein 114) (sap 114) (sf3a120). [source:swissprot;acc:q15459]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
649\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5901.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5248.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12455\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 3a subunit 2 (spliceosome associated protein 62) (sap 62) (sf3a66). [source:swissprot;acc:q15428]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
296\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5909.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4911.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20306\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 3a subunit 3 (spliceosome associated protein 61) (sap 61) (sf3a60). [source:swissprot;acc:q12874]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
648\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5901.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5248.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12455\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 3b subunit 1 (spliceosome associated protein 155) (sap 155) (sf3b155) (pre-mrna splicing factor sf3b 155 kda subunit). [source:swissprot;acc:o75533]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
191\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5923.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4638.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.27712\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 3b subunit 2 (spliceosome associated protein 145) (sap 145) (sf3b150) (pre-mrna splicing factor sf3b 145 kda subunit). [source:swissprot;acc:q13435]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
348\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5885.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4991.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.17914\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 3b subunit 3 (spliceosome associated protein 130) (sap 130) (sf3b130) (pre-mrna splicing factor sf3b 130 kda subunit). [source:swissprot;acc:q15393]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
207\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5961.43\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4771.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.24946\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 3b subunit 4 (spliceosome associated protein 49) (sap 49) (sf3b50) (pre-mrna splicing factor sf3b 49 kda subunit). [source:swissprot;acc:q15427]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1224\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4700.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4331.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08532\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor 4 isoform b; rna-binding protein. [source:refseq;acc:nm\_021164]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
395\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5269.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4532.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.16251\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor arginine/serine-rich 11 (arginine-rich 54 kda nuclear protein) (p54). [source:swissprot;acc:q05519]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1976\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6294.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5939.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05978\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor u2af 35 kda subunit (u2 auxiliary factor 35 kda subunit) (u2 snrnp auxiliary factor small subunit). [source:swissprot;acc:q01081]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1959\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5777.35\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5448.35\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.06039\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor u2af 65 kda subunit (u2 auxiliary factor 65 kda subunit) (u2 snrnp auxiliary factor large subunit) (hu2af(65)). [source:swissprot;acc:p26368]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1961\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor, arginine/serine-rich 1 (pre-mrna splicing factor sf2, p33 subunit) (alternative splicing factor asf-1). [source:swissprot;acc:q07955]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2549\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4824.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4725.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02087\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor, arginine/serine-rich 3 (pre-mrna splicing factor srp20) (x16 protein). [source:swissprot;acc:p23152]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
889\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6506.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5903.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10217\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor, arginine/serine-rich 8 (suppressor of white apricot protein homolog). [source:swissprot;acc:q12872]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2267\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8743.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9146.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04599\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
splicing factor, proline-and glutamine-rich (polypyrimidine tract- binding protein-associated splicing factor) (ptb-associated splicing factor) (psf) (dna-binding p52/p100 complex, 100 kda subunit). [source:swissprot;acc:p23246]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2070\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
9638.08\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10178.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05607\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sporulation-induced transcript 4-associated protein. [source:refseq;acc:nm\_018312]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1512\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7771.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7234.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07422\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sprouty homolog 1 (spry-1) (fragment). [source:swissprot;acc:o43609]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
676\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6215.42\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5549.2\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.12006\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
sprouty homolog 2 (spry-2). [source:swissprot;acc:o43597]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
677\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
sprouty homolog 3 (spry-3). [source:swissprot;acc:o43610]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
675\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
sprouty homolog 4 (spry-4). [source:swissprot;acc:q9c004]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
674\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
spry domain-containing socs box protein ssb-1. [source:refseq;acc:nm\_025106]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2814\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
spry domain-containing socs box protein ssb-4. [source:refseq;acc:nm\_080862]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2806\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
squalene monooxygenase (ec 1.14.99.7) (squalene epoxidase) (se). [source:swissprot;acc:q14534]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2166\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7315.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6952.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05212\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
squamous cell carcinoma antigen 1 (scca-1) (protein t4-a). [source:swissprot;acc:p29508]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1694\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6165.87\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5767.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06904\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
squamous cell carcinoma antigen recognized by t cells 1; u4/u6.u5 tri-snrnp-associated 110 kda protein; ige autoantigen; sart1(259) protein; sart1(800) protein. [source:refseq;acc:nm\_005146]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
310\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5878.79\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4909.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19736\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sqv-7-like protein (fragment). [source:sptrembl;acc:o95454]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2222\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5066.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5309.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04793\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sr rich protein. [source:refseq;acc:nm\_032870]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2257\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6534.23\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6245.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04626\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
ss18-like protein 1 (syt homolog-1). [source:swissprot;acc:o75177]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2766\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
ssxt protein (synovial sarcoma, translocated to x chromosome) (syt protein). [source:swissprot;acc:q15532]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2942\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
star-related lipid transfer protein 13 (stard13) (start domain- containing protein 13) (46h23.2). [source:swissprot;acc:q9y3m8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
478\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11053.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9649.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14549\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
star-related lipid transfer protein 4 (stard4) (start domain- containing protein 4). [source:swissprot;acc:q96dr4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1870\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6463.13\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6076.66\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0636\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
star-related lipid transfer protein 5 (stard5) (start domain- containing protein 5). [source:swissprot;acc:q9nsy2]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1865\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6463.12\vspace{3pt}}&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
star-related lipid transfer protein 6 (stard6) (start domain- containing protein 6). [source:swissprot;acc:p59095]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1862\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6463.13\vspace{3pt}}&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
star-related lipid transfer protein 8 (stard8) (start domain- containing protein 8). [source:swissprot;acc:q92502]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
479\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11053.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
9649.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14549\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
ste20-like kinase; ste2-like kinase. [source:refseq;acc:nm\_016281]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2980\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
stem cell growth factor; lymphocyte secreted c-type lectin; lymphocyte secreted c-type lectin. [source:refseq;acc:nm\_002975]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
486\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
12491.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10908.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14513\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
step ii splicing factor slu7. [source:refseq;acc:nm\_006425]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
661\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6254.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5575.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12191\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sterile alpha and tir motif containing 1; sterile alpha and heat/armadillo motif protein, ortholog of drosophila. [source:refseq;acc:nm\_015077]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1621\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5911.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5520.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07094\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
steroid hormone receptor err1 (estrogen-related receptor, alpha) (err-alpha) (estrogen receptor-like 1). [source:swissprot;acc:p11474]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
905\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11256.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10230.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1003\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
steroid hormone receptor err2 (estrogen-related receptor, beta) (err-beta) (estrogen receptor-like 2) (err beta-2). [source:swissprot;acc:o95718]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
875\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11318.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10263.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10277\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
steroidogenic factor 1 (stf-1) (sf-1) (steroid hormone receptor ad4bp) (fushi tarazu factor homolog 1). [source:swissprot;acc:q13285]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2972\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sterol regulatory element binding protein cleavage-activating protein (srebp cleavage-activating protein) (scap). [source:swissprot;acc:q12770]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
868\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6173.23\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5595.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10322\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sterol regulatory element binding protein-1 (srebp-1) (sterol regulatory element-binding transcription factor 1). [source:swissprot;acc:p36956]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
712\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5944.25\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5317.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.11781\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
sterol regulatory element binding protein-2 (srebp-2) (sterol regulatory element-binding transcription factor 2). [source:swissprot;acc:q12772]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
711\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
stip1 homology and u-box containing protein 1; serologically defined colon cancer antigen 7; carboxy terminus of hsp70p-interacting protein; heat shock protein a binding protein 2 (c-terminal). [source:refseq;acc:nm\_005861]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2350\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6765.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6480.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04406\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
stromal cell-derived factor 2 precursor (sdf-2). [source:swissprot;acc:q99470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1804\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5307.81\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
4980.54\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.06571\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
stromal cell-derived factor 2-like protein 1 precursor (sdf2 like protein 1) (pwp1-interacting protein 8). [source:swissprot;acc:q9hcn8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1805\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
stromal interaction molecule 1 precursor. [source:swissprot;acc:q13586]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2607\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6476.19\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6380.61\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01498\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
stromal interaction molecule 2 precursor. [source:swissprot;acc:q9p246]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2614\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
structure-specific recognition protein 1 (ssrp1) (recombination signal sequence recognition protein) (t160) (chromatin-specific transcription elongation factor 80 kda subunit) (fact 80 kda subunit). [source:swissprot;acc:q08945]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
957\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4917.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4483.26\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09692\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/