Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 262 to 311 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

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\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
262\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specific factor 4, 30kd subunit; cleavage-polyadenylation specificity factor, 30kd; no arches-like (zebrafish) zinc finger protein; cleavage-polyadenylation specificity factor. [source:refseq;acc:nm\_006693]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
24896.4\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
20431.7\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.21852\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
263\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
trs85 homolog. [source:swissprot;acc:q9y2l5]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
264\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cop9 constitutive photomorphogenic homolog subunit 3; cop9 complex subunit 3; jab1-containing signalosome subunit 3. [source:refseq;acc:nm\_003653]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4987.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4094.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.2181\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
265\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
wd-repeat protein wdc146. [source:swissprot;acc:q9c0j8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
24806.9\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
20369.9\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.21782\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
266\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 160 kda subunit (cpsf 160 kda subunit). [source:swissprot;acc:q10570]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
267\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ral guanine nucleotide dissociation stimulator (ralgef) (ralgds). [source:swissprot;acc:q12967]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
14021.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11523\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.21682\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
268\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 100 kda subunit (cpsf 100 kda subunit) (fragment). [source:swissprot;acc:q9p2i0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
24473.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
20127.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.21593\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
269\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u6 snrna-associated sm-like protein lsm8. [source:swissprot;acc:o95777]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4590.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5575.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.21466\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
270\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fip1-like 1; rearranged in hypereosinophilia. [source:refseq;acc:nm\_030917]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
23640.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
19479.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.21358\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
271\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
chromatin accessibility complex protein 1 (chrac-1) (chrac-15) (huchrac15) (dna polymerase epsilon subunit p15). [source:swissprot;acc:q9nrg0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
2554.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3093.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.21092\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
272\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
histone acetyltransferase type b catalytic subunit (ec 2.3.1.48). [source:swissprot;acc:o14929]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3858.52\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4669.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.21012\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
273\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 5 (eif-5). [source:swissprot;acc:p55010]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3199.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3870.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20985\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
274\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
chromosome 3p21.1 gene sequence. [source:refseq;acc:nm\_013286]\vspace{3pt}}&\multirow{9}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3119.98\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
2579.49\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.20953\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
275\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
regulator of g-protein signaling 19 (rgs19) (g-alpha interacting protein) (gaip protein). [source:swissprot;acc:p49795]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
276\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
putative rna-binding protein 15 (rna binding motif protein 15) (one-twenty two protein). [source:swissprot;acc:q96t37]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
277\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
regulator of g-protein signaling 20 (rgs20) (regulator of gz- selective protein signaling 1) (gz-selective gtpase-activating protein) (g(z)gap). [source:swissprot;acc:o76081]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
278\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription factor lbx1. [source:swissprot;acc:p52954]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
279\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mosaic protein lgn. [source:swissprot;acc:p81274]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
280\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
regulator of g-protein signaling 17 (rgs17). [source:swissprot;acc:q9ugc6]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
281\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
guanine nucleotide-binding protein g(o), alpha subunit 1. [source:swissprot;acc:p09471]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
282\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rap1 gtpase-activating protein 1 (rap1gap). [source:swissprot;acc:p47736]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
283\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
polymerase (dna directed) iota; rad30 (s. cerevisiae) homolog b; polymerase (dna-directed), iota. [source:refseq;acc:nm\_007195]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5221.28\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6314.35\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.20935\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
284\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
paxillin. [source:swissprot;acc:p49023]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
285\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
poly(a) polymerase alpha (ec 2.7.7.19) (pap) (polynucleotide adenylyltransferase alpha) (fragment). [source:swissprot;acc:p51003]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
23326.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
19296.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20885\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
286\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
exocyst complex component sec5. [source:swissprot;acc:q96kp1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
23316\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
19288.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20878\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
287\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
poly(a) polymerase gamma (ec 2.7.7.19) (pap gamma) (polynucleotide adenylyltransferase gamma) (srp rna 3' adenylating enzyme). [source:swissprot;acc:q9bwt3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
23303.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
19279.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.2087\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
288\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 73 kda subunit (cpsf 73 kda subunit). [source:swissprot;acc:q9ukf6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
23422.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
19380.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20857\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
289\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u6 snrna-associated sm-like protein lsm6 (sm protein f). [source:swissprot;acc:q9y4y8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4682.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5646.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20571\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
290\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tuftelin-interacting protein 11 (hspc006). [source:swissprot;acc:q9ubb9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4991.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6014.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20487\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
291\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm\_016172]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
44490.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
36927.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20481\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
292\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nucleotide-binding protein 1 (nbp 1). [source:swissprot;acc:p53384]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
4641.09\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5588.75\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.20419\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
293\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nucleotide binding protein 2 (nbp 2). [source:swissprot;acc:q9y5y2]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
294\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage stimulation factor subunit 3; cleavage stimulation factor, 3' pre-rna, subunit 3, 77kd. [source:refseq;acc:nm\_001326]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
22515.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
18702.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20387\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
295\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ral guanine nucleotide dissociation stimulator-like 1 (ralgds-like 1). [source:swissprot;acc:q9nzl6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
13261.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11017.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20368\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
296\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
splicing factor 3a subunit 2 (spliceosome associated protein 62) (sap 62) (sf3a66). [source:swissprot;acc:q15428]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
4911.81\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5909.18\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.20306\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
297\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
krueppel-like factor 5 (intestinal-enriched krueppel-like factor) (colon krueppel-like factor) (transcription factor bteb2) (basic transcription element binding protein 2) (bte-binding protein 2) (gc box binding protein 2). [source:swissprot;acc:q13887]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
298\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u6 snrna-associated sm-like protein lsm2 (small nuclear ribonuclear protein d homolog) (g7b) (snrnp core sm-like protein sm-x5). [source:swissprot;acc:q9y333]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4633.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5572.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20262\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
299\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ba395l14.12 (novel protein similar to small nuclear ribonucleoprotein polypeptide a' (snrpa1)). [source:sptrembl;acc:q9nu36]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
4914.27\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5907.12\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.20203\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
300\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
u2 small nuclear ribonucleoprotein a' (u2 snrnp-a'). [source:swissprot;acc:p09661]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
301\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cyclin-dependent kinases regulatory subunit 1 (cks-1) (sid1334) (pnas-16 / pnas-143). [source:swissprot;acc:p33551]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
13768.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11466\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20078\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
302\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pallidin; pallid (mouse) homolog, pallidin. [source:refseq;acc:nm\_012388]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5894.75\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7073.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19999\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
303\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
serine/threonine protein phosphatase pp1-gamma catalytic subunit (ec 3.1.3.16) (pp-1g). [source:swissprot;acc:p36873]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
22268.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
18560.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1998\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
304\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pre-mrna processing factor 31 homolog; pre-mrna processing factor 31 homolog (yeast). [source:refseq;acc:nm\_015629]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4855.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5824.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19958\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
305\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
odd-skipped related 1; odz (odd oz/ten-m) related 1. [source:refseq;acc:nm\_145260]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3856.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4624.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19912\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
306\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pnas-18. [source:sptrembl;acc:q9bzu3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
13680.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11409.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19903\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
307\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
t-complex protein 1, gamma subunit (tcp-1-gamma) (cct-gamma). [source:swissprot;acc:p49368]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
12365.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
14824.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19892\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
308\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
segment polarity protein dishevelled homolog dvl-1 (dishevelled-1) (dsh homolog 1). [source:swissprot;acc:o14640]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4977.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5966.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19878\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
309\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
segment polarity protein dishevelled homolog dvl-2 (dishevelled-2) (dsh homolog 2). [source:swissprot;acc:o14641]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4977.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5966.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19855\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
310\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
squamous cell carcinoma antigen recognized by t cells 1; u4/u6.u5 tri-snrnp-associated 110 kda protein; ige autoantigen; sart1(259) protein; sart1(800) protein. [source:refseq;acc:nm\_005146]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4909.79\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5878.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19736\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
311\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
segment polarity protein dishevelled homolog dvl-3 (dishevelled-3) (dsh homolog 3). [source:swissprot;acc:q92997]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4981.52\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5964.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.19734\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/