Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Value Type Interaction Map description Network Comparison Type Rank Gene Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2551 to 2600 of 3228 in total 
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sh3 domain-binding glutamic acid-rich-like protein. [source:swissprot;acc:o75368]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2141\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5859.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6173.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05369\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sh3-containing grb2-like protein 1 (sh3 domain protein 2b) (extra eleven-nineteen leukemia fusion gene) (een) (een fusion partner of mll). [source:swissprot;acc:q99961]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
683\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7139.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7994.06\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11969\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sh3-containing grb2-like protein 2 (sh3 domain protein 2a) (endophilin 1) (een-b1). [source:swissprot;acc:q99962]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
697\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7105.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7953.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11941\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sh3-containing grb2-like protein 3 (sh3 domain protein 2c) (een-b2). [source:swissprot;acc:q99963]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
702\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7067.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7909.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11911\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
shc transforming protein. [source:swissprot;acc:p29353]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1821\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5633.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5997\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06454\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
short coiled-coil protein; short coiled coil protein. [source:refseq;acc:nm\_032547]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2700\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5239.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5260\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00395\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
short transient receptor potential channel 4 (trpc4) (trp-related protein 4) (htrp-4) (htrp4). [source:swissprot;acc:q9ubn4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
647\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5167.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4594.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12481\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
short transient receptor potential channel 5 (trpc5) (htrp-5) (htrp5). [source:swissprot;acc:q9ul62]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
652\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5168.43\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4597.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1242\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
shroom-related protein; f-actin-binding protein; likely ortholog of mouse shroom. [source:refseq;acc:nm\_020859]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
659\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6089.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6835.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12253\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
shwachman-bodian-diamond syndrome protein (cgi-97). [source:swissprot;acc:q9y3a5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2556\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4883.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4982.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0203\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal recognition particle 54 kda protein (srp54). [source:swissprot;acc:p13624]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2248\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5833.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6106.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04688\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal recognition particle 68 kda protein (srp68). [source:swissprot;acc:q9uhb9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
757\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5622.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6260.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11331\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
signal recognition particle 9 kda protein (srp9). [source:swissprot;acc:p49458]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
260\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4244.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5193.42\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.22343\vspace{3pt}}\\\cline{2-5}
&\parbox{\wcB}{\vspace{3pt}\noindent
261\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4247.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5192.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.22255\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal recognition particle receptor alpha subunit (sr-alpha) (docking protein alpha) (dp-alpha). [source:swissprot;acc:p08240]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
896\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5208.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5737.17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10155\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducer and activator of transcription 1-alpha/beta (transcription factor isgf-3 components p91/p84). [source:swissprot;acc:p42224]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2359\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5514.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04357\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducer and activator of transcription 3 (acute-phase response factor). [source:swissprot;acc:p40763]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2357\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5514.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.17\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04358\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducer and activator of transcription 4. [source:swissprot;acc:q14765]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2358\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5514.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.14\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducer and activator of transcription 5a. [source:swissprot;acc:p42229]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2354\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5516.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5758.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04379\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducer and activator of transcription 5b. [source:swissprot;acc:p51692]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2353\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5516.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5758.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0438\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducer and activator of transcription 6 (il-4 stat). [source:swissprot;acc:p42226]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2356\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5515.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04361\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducing adaptor molecule 1; signal transducing adaptor molecule. [source:refseq;acc:nm\_003473]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
947\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11797.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10750.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09738\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transducing adaptor molecule 2; stam-like protein containing sh3 and itam domains 2. [source:refseq;acc:nm\_005843]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
989\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11743.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
10712.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09624\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal transduction protein cbl-b (sh3-binding protein cbl-b). [source:swissprot;acc:q13191]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
505\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6856.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7838.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14316\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
signal-induced proliferation-associated 1-like 1. [source:refseq;acc:nm\_015556]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1378\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6079.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6555.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07829\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to actin-related protein 3-beta. [source:sptrembl;acc:q96bt2]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1780\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5386.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5744.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06656\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to cg5057 gene product. [source:sptrembl;acc:q9btt4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2984\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to cg7020 gene product (fragment). [source:sptrembl;acc:q96ib4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2316\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6960.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7273.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04493\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to ecotropic viral integration site 5; neuroblastoma stage 4s gene. [source:refseq;acc:nm\_145245]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1234\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5807.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6300.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08482\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to expressed sequence aa415817. [source:sptrembl;acc:q8n4q9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
590\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6739.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7644.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.13424\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to expressed sequence ai415388 (fragment). [source:sptrembl;acc:q8n428]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2098\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6024.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6356.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05512\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to glucosamine-phosphate n-acetyltransferase (hypothetical protein flj33258). [source:sptrembl;acc:q96ek6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2066\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5882.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6213.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05622\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to kinase suppressor of ras (fragment). [source:sptrembl;acc:q8ivt5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1429\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5880.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6334.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07726\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to lim domain only 7 (fragment). [source:sptrembl;acc:q8n6m2]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1042\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5887.52\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6434.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09287\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to lysozyme c-1 (1,4-beta-n-acylmuramidase c, ec 3.2.1.17). [source:refseq;acc:nm\_032517]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3032\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
similar to mob-lak. [source:refseq;acc:nm\_145279]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2937\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to nuclear protein e3-3 orf1. [source:sptrembl;acc:q9bu61]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2710\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5603.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5583.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00351\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to putative transmembrane protein; homolog of yeast golgi membrane protein yif1p (yip1p-interacting factor). [source:refseq;acc:nm\_033557]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1130\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5790.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6303.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08864\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to ribosomal protein, large, p0. [source:sptrembl;acc:q96fq9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2262\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5148.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5386.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04612\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to trna synthetase class ii. [source:refseq;acc:nm\_152268]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1195\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5439.56\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5911.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08671\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
similar to zinc finger protein 277. [source:sptrembl;acc:q8wwa6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1624\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4102.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4392.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07071\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sin3 associated polypeptide p18 (2hor0202). [source:swissprot;acc:o00422]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2518\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6204.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6360.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02516\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sin3 associated polypeptide p30; sin3-associated polypeptide, 30kd. [source:refseq;acc:nm\_003864]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2674\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7780.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7741.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00515\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
single-minded homolog 1. [source:swissprot;acc:p81133]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1008\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5707.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6249.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09485\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sipl protein. [source:refseq;acc:nm\_018269]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
910\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6522.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7175.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09999\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sirtuin 1; sir2-like 1; sirtuin type 1; sir2alpha; sirtuin silent mating type information regulation 2 homolog 1 (s. cerevisiae). [source:refseq;acc:nm\_012238]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2199\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6344.31\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6657.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04944\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
sirtuin 7; sir2-related protein type 7; sirtuin type 7; sirtuin (silent mating type information regulation 2, s.cerevisiae, homolog) 7; silent mating type information regulation 2, s.cerevisiae, homolog 7; sirtuin silent mating type information regulation 2 homolog 7 (s. cerevisiae). [source:refseq;acc:nm\_016538]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1244\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4835.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5243.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08431\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
skd1 protein (vacuolar sorting protein 4b). [source:swissprot;acc:o75351]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3037\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
skeletal muscle and kidney enriched inositol phosphatase isoform 1; 43-kda form skeletal muscle and kidney enriched inositol phosphatase. [source:refseq;acc:nm\_016532]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2994\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
skeletal muscle lim-protein 2 (slim 2) (four and a half lim domains protein 3) (fhl-3). [source:swissprot;acc:q13643]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2443\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3634.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3756.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03359\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/