Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2432 to 2481 of 3228 in total 
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2432\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
26s proteasome non-atpase regulatory subunit 6 (26s proteasome regulatory subunit s10) (p42a) (proteasome regulatory particle subunit p44s10). [source:swissprot;acc:q15008]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
215.807\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.556\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00347\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2433\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
elongation factor 1-alpha 1 (ef-1-alpha-1) (elongation factor 1 a-1) (eef1a-1) (elongation factor tu) (ef-tu). [source:swissprot;acc:p04720]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.366\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.117\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00346\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2434\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
methylenetetrahydrofolate reductase (ec 1.5.1.20). [source:swissprot;acc:p42898]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
213.021\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.286\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2435\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc-finger protein zpr1 (zinc finger protein 259). [source:swissprot;acc:o75312]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
217.366\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.117\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2436\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
elongation factor 1-alpha 2 (ef-1-alpha-2) (elongation factor 1 a-2) (eef1a-2) (statin s1). [source:swissprot;acc:q05639]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2437\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
guanylate kinase (ec 2.7.4.8) (gmp kinase). [source:swissprot;acc:q16774]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
219.361\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
220.116\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00344\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2438\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit alpha type 4 (ec 3.4.25.1) (proteasome component c9) (macropain subunit c9) (multicatalytic endopeptidase complex subunit c9) (proteasome subunit l). [source:swissprot;acc:p25789]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
214.049\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.323\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0034\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2439\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
14-3-3 protein beta/alpha (protein kinase c inhibitor protein-1) (kcip-1) (protein 1054). [source:swissprot;acc:p31946]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
220.681\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
221.425\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00337\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2440\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
26s proteasome non-atpase regulatory subunit 3 (26s proteasome regulatory subunit s3) (proteasome subunit p58). [source:swissprot;acc:o43242]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.645\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.376\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00336\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2441\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
electron transfer flavoprotein alpha-subunit, mitochondrial precursor (alpha-etf). [source:swissprot;acc:p13804]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
180.137\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
180.732\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0033\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2442\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription initiation factor tfiid 70 kda subunit (tafii-70) (tafii-80) (tafii80). [source:swissprot;acc:p49848]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
204.419\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
203.748\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00329\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2443\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-like protein sumo-1 conjugating enzyme (ec 6.3.2.19) (sumo- 1-protein ligase) (ubiquitin carrier protein) (ubiquitin-conjugating enzyme ubce2a) (p18). [source:swissprot;acc:p50550]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.073\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.364\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00328\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2444\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 288 (dendritic-derived btb/poz zinc finger protein). [source:swissprot;acc:q9hc78]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
206.086\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
206.753\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00324\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2445\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
kruppel-related zinc finger protein hckrox. [source:refseq;acc:nm\_015872]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
206.088\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
206.756\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2446\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
epoxide hydrolase 1 (ec 3.3.2.3) (microsomal epoxide hydrolase) (epoxide hydratase). [source:swissprot;acc:p07099]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
182.272\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
181.683\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2447\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
peroxisomal targeting signal 2 receptor (pts2 receptor) (peroxin-7). [source:swissprot;acc:o00628]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
206.084\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
206.752\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2448\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glycine dehydrogenase [decarboxylating], mitochondrial precursor (ec 1.4.4.2) (glycine decarboxylase) (glycine cleavage system p- protein). [source:swissprot;acc:p23378]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
212.446\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.766\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00321\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2449\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphatidate cytidylyltransferase 2 (ec 2.7.7.41) (cdp-diglyceride synthetase 2) (cdp-diglyceride pyrophosphorylase 2) (cdp- diacylglycerol synthase 2) (cds 2) (ctp:phosphatidate cytidylyltransferase 2) (cdp-dag synthase 2) (cdp-dg synthetase 2). [source:swissprot;acc:o95674]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
204.717\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.371\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00319\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2450\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit beta type 6 precursor (ec 3.4.25.1) (proteasome delta chain) (macropain delta chain) (multicatalytic endopeptidase complex delta chain) (proteasome subunit y). [source:swissprot;acc:p28072]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
213.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.177\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00316\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2451\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
secretory carrier-associated membrane protein 2. [source:swissprot;acc:o15127]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
204.688\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
205.333\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00315\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2452\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
secretory carrier-associated membrane protein 3. [source:swissprot;acc:o14828]\vspace{3pt}}&&&\\\cline{1-2}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2453\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
secretory carrier-associated membrane protein 1. [source:swissprot;acc:o15126]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
205.332\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2454\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 13, member 4 (na+/sulfate cotransporter sut-1). [source:swissprot;acc:q9ukg4]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
204.683\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
205.326\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00314\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2455\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 13, member 3 (sodium-dependent high-affinity dicarboxylate transporter 2) (na(+)/dicarboxylate cotransporter 3) (nadc-3) (hnadc3). [source:swissprot;acc:q8wwt9]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2456\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 13, member 1 (renal sodium/sulfate cotransporter) (na(+)/sulfate cotransporter) (hnasi-1). [source:swissprot;acc:q9bzw2]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2457\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
vesicle-fusing atpase (ec 3.6.4.6) (vesicular-fusion protein nsf) (n- ethylmaleimide sensitive fusion protein) (nem-sensitive fusion protein). [source:swissprot;acc:p46459]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
213.588\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.92\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2458\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 13, member 2 (renal sodium/dicarboxylate cotransporter) (na(+)/dicarboxylate cotransporter 1) (nadc-1). [source:swissprot;acc:q13183]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
204.683\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.326\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2459\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphatidate cytidylyltransferase 1 (ec 2.7.7.41) (cdp-diglyceride synthetase 1) (cdp-diglyceride pyrophosphorylase 1) (cdp- diacylglycerol synthase 1) (cds 1) (ctp:phosphatidate cytidylyltransferase 1) (cdp-dag synthase 1) (cdp-dg synthetase 1). [source:swissprot;acc:q92903]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
204.653\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.286\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00309\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2460\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pepsin a precursor (ec 3.4.23.1). [source:swissprot;acc:p00790]\vspace{3pt}}&\multirow{12}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
235.812\vspace{3pt}}}&\multirow{12}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
235.088\vspace{3pt}}}&\multirow{12}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00308\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2461\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 20 (phosphate transporter), member 2; glvr-2; pit-2; gibbon ape leukemia virus receptor 2; murine leukemia virus, amphotropic; receptor. [source:refseq;acc:nm\_006749]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2462\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
farnesyl pyrophosphate synthetase (fpp synthetase) (fps) (farnesyl diphosphate synthetase) [includes: dimethylallyltransferase (ec 2.5.1.1); geranyltranstransferase (ec 2.5.1.10)]. [source:swissprot;acc:p14324]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2463\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protocadherin 15 precursor. [source:swissprot;acc:q96qu1]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2464\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 20 (phosphate transporter), member 1; glvr-1; pit-1; gibbon ape leukemia virus receptor 1. [source:refseq;acc:nm\_005415]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2465\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
lipocalin-interacting membrane receptor. [source:refseq;acc:nm\_018113]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2466\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein gli1 (glioma-associated oncogene) (oncogene gli). [source:swissprot;acc:p08151]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2467\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
suppressor of fused. [source:refseq;acc:nm\_016169]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2468\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein gli3. [source:swissprot;acc:p10071]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2469\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
limb region 1 protein; limb region 1. [source:refseq;acc:nm\_022458]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2470\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
gastricsin precursor (ec 3.4.23.3) (pepsinogen c). [source:swissprot;acc:p20142]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2471\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein gli2 (tax helper protein). [source:swissprot;acc:p10070]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2472\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tumor endothelial marker 6; thyroid specific ptb domain protein; tensin 3. [source:refseq;acc:nm\_022748]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
218.218\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.564\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00301\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2473\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
c-jun-amino-terminal kinase interacting protein 3 (jnk-interacting protein 3) (jip-3) (jnk map kinase scaffold protein 3) (mitogen- activated protein kinase 8-interacting protein 3). [source:swissprot;acc:q9upt6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
218.644\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.991\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.003\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2474\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
26s protease regulatory subunit 6a (tat-binding protein 1) (tbp-1) (proteasome subunit p50). [source:swissprot;acc:p17980]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
216.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.285\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00298\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2475\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
c1 domain-containing phosphatase and tensin-like protein isoform 2; putative protein tyrosine phosphatase; c1 domain-containing phosphatase and tensin-like protein; tensin 2. [source:refseq;acc:nm\_015319]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
218.219\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.571\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2476\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
xylulokinase homolog; xylulokinase (h. influenzae) homolog. [source:refseq;acc:nm\_005108]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
211.205\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
210.577\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2477\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial ribosomal protein l30 isoform a. [source:refseq;acc:nm\_145212]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
216.177\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
216.801\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00289\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2478\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
26s protease regulatory subunit s10b (proteasome subunit p42) (p44) (conserved atpase domain protein 44) (cadp44). [source:swissprot;acc:q92524]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2479\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rho-gtpase-activating protein 8. [source:swissprot;acc:q9nsg0]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
218.093\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.72\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00287\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2480\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rho-gtpase-activating protein 1 (gtpase-activating protein rhoogap) (rho-related small gtpase protein activator) (cdc42 gtpase-activating protein) (p50-rhogap). [source:swissprot;acc:q07960]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2481\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
kinesin light chain 2 (klc 2). [source:swissprot;acc:q9h0b6]\vspace{3pt}}&&&\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/