Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Value Type description Interaction Map Network Comparison Type Rank red Gene Filtered green network_comparison
Results: HTML CSV LaTeX Showing element 2130 to 2179 of 3228 in total 
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
programmed cell death protein 6 (probable calcium-binding protein alg- 2). [source:swissprot;acc:o75340]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
439\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6252.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7192.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.15039\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
programmed cell death protein 8, mitochondrial precursor (ec 1.-.-.-) (apoptosis-inducing factor). [source:swissprot;acc:o95831]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2696\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5176.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5154.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00436\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
prohibitin. [source:swissprot;acc:p35232]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
550\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5773.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6563.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.13687\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proliferating cell nuclear antigen (pcna) (cyclin). [source:swissprot;acc:p12004]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1593\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4977.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5333.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07152\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proliferating-cell nucleolar antigen p120 (proliferation-associated nucleolar protein p120). [source:swissprot;acc:p46087]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
469\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3831.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4388.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14554\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proliferation-associated protein 2g4 (cell cycle protein p38-2g4 homolog) (hg4-1). [source:swissprot;acc:q9uq80]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1707\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5777.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6174.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06873\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proline oxidase, mitochondrial precursor (ec 1.5.3.-) (proline dehydrogenase). [source:swissprot;acc:o43272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1086\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6520.28\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7119.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09187\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proline synthetase co-transcribed bacterial homolog protein. [source:swissprot;acc:o94903]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
435\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5233.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6022.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1507\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
prolyl 4-hydroxylase alpha-1 subunit precursor (ec 1.14.11.2) (4-ph alpha-1) (procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit). [source:swissprot;acc:p13674]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2109\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6916.14\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7295.24\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.05481\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
prolyl 4-hydroxylase alpha-2 subunit precursor (ec 1.14.11.2) (4-ph alpha-2) (procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit). [source:swissprot;acc:o15460]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2112\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
propionyl-coa carboxylase beta chain, mitochondrial precursor (ec 6.4.1.3) (pccase beta subunit) (propanoyl-coa:carbon dioxide ligase beta subunit). [source:swissprot;acc:p05166]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
850\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6194.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6839.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10417\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proprotein convertase subtilisin/kexin type 5 precursor (ec 3.4.21.-) (proprotein convertase pc5) (subtilisin/kexin-like protease pc5) (convertase pc5) (pc6) (hpc6). [source:swissprot;acc:q92824]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
734\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
13241.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11864\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1161\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
prostate tumor overexpressed gene 1; prostate tumor over expressed gene 1. [source:refseq;acc:nm\_017432]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3106\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
protease inhibitor 15 preproprotein; 25 kda trypsin inhibitor. [source:refseq;acc:nm\_015886]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2966\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome activator complex subunit 3 (proteasome activator 28-gamma subunit) (pa28gamma) (pa28g) (activator of multicatalytic protease subunit 3) (11s regulator complex gamma subunit) (reg-gamma) (ki nuclear autoantigen). [source:swissprot;acc:q12920]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2997\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 1 (ec 3.4.25.1) (proteasome component c2) (macropain subunit c2) (multicatalytic endopeptidase complex subunit c2) (proteasome nu chain) (30 kda prosomal protein) (pros-30). [source:swissprot;acc:p25786]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1572\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6068.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6504.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07194\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 2 (ec 3.4.25.1) (proteasome component c3) (macropain subunit c3) (multicatalytic endopeptidase complex subunit c3). [source:swissprot;acc:p25787]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1565\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6343.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6803.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07246\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 3 (ec 3.4.25.1) (proteasome component c8) (macropain subunit c8) (multicatalytic endopeptidase complex subunit c8). [source:swissprot;acc:p25788]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1405\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6291.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6781.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07783\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 4 (ec 3.4.25.1) (proteasome component c9) (macropain subunit c9) (multicatalytic endopeptidase complex subunit c9) (proteasome subunit l). [source:swissprot;acc:p25789]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1578\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6213.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6659.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0718\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 5 (ec 3.4.25.1) (proteasome zeta chain) (macropain zeta chain) (multicatalytic endopeptidase complex zeta chain). [source:swissprot;acc:p28066]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
636\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5713.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6432.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12593\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 6 (ec 3.4.25.1) (proteasome iota chain) (macropain iota chain) (multicatalytic endopeptidase complex iota chain) (27 kda prosomal protein) (pros-27) (p27k). [source:swissprot;acc:p34062]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1637\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6112.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6540.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07008\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 7 (ec 3.4.25.1) (proteasome subunit rc6-1) (proteasome subunit xapc7). [source:swissprot;acc:o14818]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1441\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6216.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6693.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07678\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit alpha type 7-like (ec 3.4.25.1). [source:swissprot;acc:q8taa3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1442\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6216.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6693.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07674\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 1 (ec 3.4.25.1) (proteasome component c5) (macropain subunit c5) (multicatalytic endopeptidase complex subunit c5) (proteasome gamma chain). [source:swissprot;acc:p20618]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2213\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6642.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6967.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04897\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 10 precursor (ec 3.4.25.1) (proteasome mecl-1) (macropain subunit mecl-1) (multicatalytic endopeptidase complex subunit mecl-1). [source:swissprot;acc:p40306]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1513\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6079.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6530.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07421\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 2 (ec 3.4.25.1) (proteasome component c7-i) (macropain subunit c7-i) (multicatalytic endopeptidase complex subunit c7-i). [source:swissprot;acc:p49721]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1618\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6035.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6464.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07106\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 3 (ec 3.4.25.1) (proteasome theta chain) (proteasome chain 13) (proteasome component c10-ii). [source:swissprot;acc:p49720]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1679\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6180.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6608.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06923\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 4 precursor (ec 3.4.25.1) (proteasome beta chain) (macropain beta chain) (multicatalytic endopeptidase complex beta chain) (proteasome chain 3) (hsn3) (hsbpros26). [source:swissprot;acc:p28070]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1340\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5979.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6453.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07935\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 5 precursor (ec 3.4.25.1) (proteasome epsilon chain) (macropain epsilon chain) (multicatalytic endopeptidase complex epsilon chain) (proteasome subunit x) (proteasome chain 6) (proteasome subunit mb1). [source:swissprot;acc:p28074]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1466\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6523.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7019.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07608\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 6 precursor (ec 3.4.25.1) (proteasome delta chain) (macropain delta chain) (multicatalytic endopeptidase complex delta chain) (proteasome subunit y). [source:swissprot;acc:p28072]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1563\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6221.35\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6672.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07252\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 7 precursor (ec 3.4.25.1) (proteasome subunit z) (macropain chain z) (multicatalytic endopeptidase complex chain z). [source:swissprot;acc:q99436]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1732\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5781.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6173.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06768\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 8 precursor (ec 3.4.25.1) (proteasome component c13) (macropain subunit c13) (multicatalytic endopeptidase complex subunit c13). [source:swissprot;acc:p28062]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1595\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6351.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6805.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07149\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
proteasome subunit beta type 9 precursor (ec 3.4.25.1) (proteasome chain 7) (macropain chain 7) (multicatalytic endopeptidase complex chain 7) (ring12 protein) (low molecular mass protein 2). [source:swissprot;acc:p28065]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1564\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6257.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6711.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07252\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein 1-4 (atp binding protein associated with cell differentiation). [source:swissprot;acc:o14530]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2232\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3650.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3484.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04759\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein 4.1 (band 4.1) (p4.1) (epb4.1) (4.1r). [source:swissprot;acc:p11171]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
967\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7813.35\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8569.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09684\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein ad-016 (protein cgi-116) (x0009). [source:swissprot;acc:q9y3c0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1309\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6110.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6607.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08146\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein arginine n-methyltransferase 1 (ec 2.1.1.-) (interferon receptor 1-bound protein 4). [source:swissprot;acc:q99873]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
110\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4366.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5899.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.35116\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein arginine n-methyltransferase 3 (ec 2.1.1.-) (fragment). [source:swissprot;acc:o60678]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2241\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3670.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3504.91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04723\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein arginine n-methyltransferase 4 (ec 2.1.1.-). [source:swissprot;acc:q9nr22]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
111\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4366.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5899.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.35116\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein bap28. [source:swissprot;acc:q9h583]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
871\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3956.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4364.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.10313\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein c14orf122 (cgi-112). [source:swissprot;acc:q9y3b6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1452\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5602.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6031.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07659\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein c20orf24 (rab5-interacting protein) (rip5) (pnas-11). [source:swissprot;acc:q9buv8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3131\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein c20orf4 (protein cgi-23) (pro0225). [source:swissprot;acc:q9y312]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1364\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5815.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6272.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07868\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein c20orf43 (hspc164/hspc169) (ad-007) (cda05). [source:swissprot;acc:q9by42]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3206\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein c20orf45 (cgi-107). [source:swissprot;acc:q9y3b1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2132\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5328.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5616.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05402\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein c21orf2 (c21orf-humf09g8.5) (yf5/a2). [source:swissprot;acc:o43822]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2874\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
protein c6orf55 (dopamine responsive protein drg-1) (my012 protein) (hspc228). [source:swissprot;acc:q9np79]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3219\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein cdc27hs (cell division cycle protein 27 homolog) (h-nuc). [source:swissprot;acc:p30260]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
860\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5210.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5749.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1034\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein cgi-126 (protein hspc155). [source:swissprot;acc:q9y3c8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
79\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3074.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4567.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.48558\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
protein cgi-140 (protein ptd008) (my006 protein). [source:swissprot;acc:q9y284]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3102\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/