Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.


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Value Type description Rank Gene Network Comparison Type Interaction Map Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 144 to 193 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l34, mitochondrial precursor (l34mt). [source:swissprot;acc:q9bq48]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1300\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6047.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5589.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08204\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l34. [source:swissprot;acc:p49207]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2077\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3423.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3614.91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05579\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l35. [source:swissprot;acc:p42766]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2065\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3410.23\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3602.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05631\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l36, mitochondrial precursor (l36mt) (brca1- interacting protein 1). [source:swissprot;acc:q9p0j6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2264\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3473.68\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3633.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04608\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l37 (g1.16). [source:swissprot;acc:p02403]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2548\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4824.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4725.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02087\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l37a. [source:swissprot;acc:p12751]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2959\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l39. [source:swissprot;acc:p02404]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
805\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5226.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4708.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11003\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l4 (l1). [source:swissprot;acc:p36578]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2360\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3682.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3843.06\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04354\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l5. [source:swissprot;acc:p46777]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2169\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3459.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3639.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05203\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l7. [source:swissprot;acc:p18124]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2308\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3804.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3976.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04522\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l8. [source:swissprot;acc:p25120]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
386\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5279.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4533.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.16447\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
60s ribosomal protein l9. [source:swissprot;acc:p32969]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2225\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3580.35\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3750.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04766\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
65 kda yes-associated protein (yap65). [source:swissprot;acc:p46937]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1459\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6104.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5672.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07612\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
69 kda islet cell autoantigen (ica69) (islet cell autoantigen 1) (islet cell autoantigen p69) (icap69). [source:swissprot;acc:q05084]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3227\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
9 kda protein. [source:swissprot;acc:p13994]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1461\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6104.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5672.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07612\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
a kindred of iglon. [source:refseq;acc:nm\_173808]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2712\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5583.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5603.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00351\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
a-kinase anchor protein 5 (a-kinase anchor protein 79 kda) (akap 79) (camp-dependent protein kinase regulatory subunit ii high affinity binding protein) (h21). [source:swissprot;acc:p24588]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2788\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
a-raf proto-oncogene serine/threonine-protein kinase (ec 2.7.1.-) (a-raf-1) (proto-oncogene pks). [source:swissprot;acc:p10398]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
192\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
14008\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
17757.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.26767\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
aarf domain containing kinase 1. [source:refseq;acc:nm\_020421]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1177\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6305.95\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5799.35\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.08735\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
aarf domain containing kinase 2; putative ubiquinone biosynthesis protein aarf. [source:refseq;acc:nm\_052853]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1175\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
aarf domain containing kinase 4. [source:refseq;acc:nm\_024876]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1176\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
abhydrolase domain containing protein 2 (protein phps1-2). [source:swissprot;acc:p08910]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2223\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6145.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5864.49\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04786\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
abl-interactor 2; abl-interacting protein 1 (sh3-containing protein); abl binding protein 3; arg protein tyrosine kinase-binding protein; abl-interactor protein 2b; similar to spectrin sh3 domain binding protein 1. [source:refseq;acc:nm\_005759]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1333\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6269.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5803.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0802\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acetyl-coa acetyltransferase, mitochondrial precursor (ec 2.3.1.9) (acetoacetyl-coa thiolase) (t2). [source:swissprot;acc:p24752]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2304\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7263.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6946.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04565\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acetyl-coa carboxylase 1 (ec 6.4.1.2) (acc-alpha) [includes: biotin carboxylase (ec 6.3.4.14)]. [source:swissprot;acc:q13085]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1514\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7768.35\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7232.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07414\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acetyl-coa carboxylase 2 (ec 6.4.1.2) (acc-beta) [includes: biotin carboxylase (ec 6.3.4.14)]. [source:swissprot;acc:o00763]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1509\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7775.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7237.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07431\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acetyl-coenzyme a synthetase, cytoplasmic (ec 6.2.1.1) (acetate--coa ligase) (acyl-activating enzyme) (acetyl-coa synthetase) (acs) (acecs). [source:swissprot;acc:q9nr19]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2342\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7317.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7007.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04416\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acid ceramidase precursor (ec 3.5.1.23) (acylsphingosine deacylase) (n-acylsphingosine amidohydrolase) (ac) (putative 32 kda heart protein) (php32). [source:swissprot;acc:q13510]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1893\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7261.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6830.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06319\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acrc protein; putative nuclear protein. [source:refseq;acc:nm\_052957]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1172\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6335.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5826.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08747\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
actin binding lim protein 2. [source:refseq;acc:nm\_032432]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1012\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6340.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5791.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0948\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
actin, cytoplasmic 2 (gamma-actin). [source:swissprot;acc:p02571]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1354\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6512.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6036.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07893\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
actin-binding lim protein 1 isoform a; lim actin-binding protein 1; limatin; actin-binding lim protein. [source:refseq;acc:nm\_002313]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1020\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6340.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5791.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0948\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
actin-like protein 2 (actin-related protein 2). [source:swissprot;acc:o15142]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1778\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5744.89\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5386.37\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.06656\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
actin-like protein 3 (actin-related protein 3) (actin-2). [source:swissprot;acc:p32391]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1783\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
actin-related protein 2/3 complex subunit 1a (sop2-like protein). [source:swissprot;acc:q92747]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1786\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
activated p21cdc42hs kinase. [source:refseq;acc:nm\_005781]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1055\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5198.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4757.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09279\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
activator of basal transcription 1; tata-binding protein-binding protein; basal transcriptional activator. [source:refseq;acc:nm\_013375]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1146\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6837.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6281.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08858\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
activator of camp-responsive element modulator (crem) in testis; lim protein act. [source:refseq;acc:nm\_020482]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2435\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3797.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3669.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03501\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
activin a receptor, type ic; activin receptor-like kinase 7. [source:refseq;acc:nm\_145259]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2160\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5660.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5379.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05218\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
activin receptor type i precursor (ec 2.7.1.37) (actr-i) (serine/threonine-protein kinase receptor r1) (skr1) (activin receptor-like kinase 2) (alk-2) (tgf-b superfamily receptor type i) (tsr-i). [source:swissprot;acc:q04771]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3050\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acyl carrier protein, mitochondrial precursor (acp) (nadh-ubiquinone oxidoreductase 9.6 kda subunit) (ci-sdap). [source:swissprot;acc:o14561]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1917\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7287.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6858.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06246\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acyl-coa dehydrogenase, medium-chain specific, mitochondrial precursor (ec 1.3.99.3) (mcad). [source:swissprot;acc:p11310]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2612\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6476.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6380.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01498\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acyl-coa dehydrogenase, short/branched chain specific, mitochondrial precursor (ec 1.3.99.-) (sbcad) (2-methyl branched chain acyl-coa dehydrogenase) (2-mebcad) (2-methylbutyryl-coenzyme a dehydrogenase) (2-methylbutyryl-coa dehydrogenase). [source:swissprot;acc:p45954]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1620\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6743.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6296.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07104\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acyl-coa dehydrogenase, very-long-chain specific, mitochondrial precursor (ec 1.3.99.-) (vlcad). [source:swissprot;acc:p49748]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
380\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
15138.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12998.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.16461\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acyl-coenzyme a oxidase 1, peroxisomal (ec 1.3.3.6) (palmitoyl-coa oxidase) (aox). [source:swissprot;acc:q15067]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2035\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7315.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6920.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05706\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
acyl-coenzyme a oxidase 2, peroxisomal (ec 1.3.3.6) (branched-chain acyl-coa oxidase) (brcacox) (trihydroxycoprostanoyl-coa oxidase) (thccox) (thca-coa oxidase). [source:swissprot;acc:q99424]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2154\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7247.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6884.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05268\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
ad24 protein. [source:refseq;acc:nm\_022451]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
445\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4315.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3753.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14978\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
adamts-9 precursor (ec 3.4.24.-) (a disintegrin and metalloproteinase with thrombospondin motifs 9) (adam-ts 9) (adam-ts9). [source:swissprot;acc:q9p2n4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1530\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6350.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5916.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07344\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
adapter-related protein complex 1 beta 1 subunit (beta-adaptin 1) (adaptor protein complex ap-1 beta-1 subunit) (golgi adaptor ha1/ap1 adaptin beta subunit) (clathrin assembly protein complex 1 beta large chain). [source:swissprot;acc:q10567]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2064\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5861.31\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5548.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05632\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
adapter-related protein complex 1 gamma 1 subunit (gamma-adaptin) (adaptor protein complex ap-1 gamma-1 subunit) (golgi adaptor ha1/ap1 adaptin gamma-1 subunit) (clathrin assembly protein complex 1 gamma-1 large chain). [source:swissprot;acc:o43747]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2059\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5865.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5552.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0564\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/