Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
MK5 Proteome Analysis

Table 3: Type II network, divided ranks. This table presents the output of the simulation of a type-II network in which we relied on the high confidence interactions and micro-array results. The output of the micro-array was then ranked and these ranks used as input into the network simulation. After performing two such simulations (one for the MK5 off and one for the MK5 on microarray output), we divided the ranks and sorted the results accordingly. The output of this technique is a collection of proteins that cluster naturally together.
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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Value Type description Interaction Map Rank Gene Network Comparison Type Filtered green red network_comparison
Results: HTML CSV LaTeX
Showing element 1062 to 1111 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
ftsj homolog 3; likely ortholog of mouse ectoplacental cone, invasive trophoblast giant cells, extraembryonic ectoderm and chorion sequence 3. [source:refseq;acc:nm\_017647]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
621\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4633.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4115.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.12601\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
fumarate hydratase, mitochondrial precursor (ec 4.2.1.2) (fumarase). [source:swissprot;acc:p07954]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2726\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5351.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5332.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00351\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
fuse binding protein 3 (fragment). [source:sptrembl;acc:q92946]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2093\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6138.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5817.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05524\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
fuse-binding protein-interacting repressor isoform b; siah binding protein 1; pyrimidine tract binding splicing factor; ro ribonucleoprotein-binding protein 1; poly-u binding splicing factor puf60. [source:refseq;acc:nm\_014281]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1590\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6819.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6364.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07155\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
fused toes homolog; likely ortholog of mouse fused toes. [source:refseq;acc:nm\_022476]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1820\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5997\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5633.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06454\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
fyve-finger-containing rab5 effector protein rabenosyn-5. [source:refseq;acc:nm\_022340]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2998\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
fzr1 protein; fizzy-related protein; cdc20-like 1b. [source:refseq;acc:nm\_016263]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
733\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
11864\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
13241.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1161\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
g protein-coupled receptor 66. [source:refseq;acc:nm\_006056]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2815\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
g-rich sequence factor-1 (grsf-1). [source:swissprot;acc:q12849]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1396\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6256.54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5803.54\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07806\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
g1 to s phase transition protein 1 homolog (gtp-binding protein gst1-hs). [source:swissprot;acc:p15170]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1336\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6632.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6140.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08014\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
g2/mitotic-specific cyclin b1. [source:swissprot;acc:p14635]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
362\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
10879.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12786.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.17525\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
g2/mitotic-specific cyclin b2. [source:swissprot;acc:o95067]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
360\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
10886\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
12796.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.17553\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
ga binding protein alpha chain (gabp-alpha subunit) (transcription factor e4tf1-60) (nuclear respiratory factor-2 subunit alpha). [source:swissprot;acc:q06546]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
455\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5610.95\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
4890.51\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.14731\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
ga binding protein beta-2 chain (gabp-beta-2 subunit) (transcription factor e4tf1-47) (gapbp-2) (nuclear respiratory factor-2 subunit gamma). [source:swissprot;acc:q06545]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
456\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gaba(a) receptor-associated protein; gaba(a)-receptor-associated protein. [source:refseq;acc:nm\_007278]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
133\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
17580.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
23421.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.33225\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gaba-a receptor-associated protein. [source:sptrembl;acc:q9by60]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
134\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
16426.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
21785.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.32626\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
galactose-1-phosphate uridylyltransferase (ec 2.7.7.12) (gal-1-p uridylyltransferase) (udp-glucose--hexose-1-phosphate uridylyltransferase). [source:swissprot;acc:p07902]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
517\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5600.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4910.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14051\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
galectin-4 (lactose-binding lectin 4) (l-36 lactose binding protein) (l36lbp) (antigen ny-co-27). [source:swissprot;acc:p56470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
966\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8575.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7817.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09686\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
galectin-9 (hom-hd-21) (ecalectin). [source:swissprot;acc:o00182]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
973\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8566.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7810.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09682\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma adducin (adducin-like protein 70). [source:swissprot;acc:q9uey8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1365\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6255.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5799.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07862\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma enolase (ec 4.2.1.11) (2-phospho-d-glycerate hydro-lyase) (neural enolase) (nse) (enolase 2). [source:swissprot;acc:p09104]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
943\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7241\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6597.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09746\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor alpha-1 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p14867]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
587\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7644.63\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6739.83\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.13425\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor alpha-2 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p47869]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
580\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor alpha-3 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p34903]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
588\vspace{3pt}}&&&\\\cline{1-2}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor alpha-4 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p48169]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
584\vspace{3pt}}&&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6739.82\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor alpha-6 subunit precursor (gaba(a) receptor). [source:swissprot;acc:q16445]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
581\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor epsilon subunit precursor (gaba(a) receptor). [source:swissprot;acc:p78334]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
585\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor gamma-1 subunit precursor (gaba(a) receptor). [source:swissprot;acc:q8n1c3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
579\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
7644.62\vspace{3pt}}}&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor gamma-2 subunit precursor (gaba(a) receptor). [source:swissprot;acc:p18507]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
582\vspace{3pt}}&&&\\\cline{1-2}\cline{4-4}
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-aminobutyric-acid receptor gamma-3 subunit precursor (gaba(a) receptor). [source:swissprot;acc:q99928]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
577\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
6739.81\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-butyrobetaine,2-oxoglutarate dioxygenase (ec 1.14.11.1) (gamma-butyrobetaine hydroxylase) (gamma-bbh). [source:swissprot;acc:o75936]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1348\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6640.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6153.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07921\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-interferon inducible lysosomal thiol reductase precursor (gamma-interferon-inducible protein ip-30). [source:swissprot;acc:p13284]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3101\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-sarcoglycan (gamma-sg) (35 kda dystrophin-associated glycoprotein) (35dag). [source:swissprot;acc:q13326]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
741\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6434.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11554\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-snap-associated factor 1; rab11-interacting protein. [source:refseq;acc:nm\_015470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1450\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6031.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5602.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07659\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gamma-soluble nsf attachment protein (snap-gamma) (n-ethylmaleimide- sensitive factor attachment protein, gamma). [source:swissprot;acc:q99747]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
500\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4093.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4682.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.1441\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
ganglioside-induced differentiation-associated protein 1-like 1. [source:refseq;acc:nm\_024034]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
776\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6533.36\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5874.76\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.11211\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
ganglioside-induced differentiation-associated protein 1. [source:refseq;acc:nm\_018972]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
779\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gastricsin precursor (ec 3.4.23.3) (pepsinogen c). [source:swissprot;acc:p20142]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1188\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4776.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4392.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08732\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gbp protein isoform a. [source:refseq;acc:nm\_017870]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
23\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
1894.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
699.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2.7072\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gc-rich sequence dna-binding factor homolog. [source:swissprot;acc:q9y5b6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1685\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6508.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6088.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06905\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gcn5-like protein 1 (rt14 protein). [source:swissprot;acc:p78537]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2432\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8453.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8154.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03671\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gdp-fucose protein o-fucosyltransferase 1 precursor (ec 2.4.1.221) (peptide o-fucosyltransferase) (o-fuct-1). [source:swissprot;acc:q9h488]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3125\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
gdp-mannose pyrophosphorylase a; mannose-1-phosphate guanylyltransferase (gdp). [source:refseq;acc:nm\_013335]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1520\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5673.81\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5283.8\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07381\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
gdp-mannose pyrophosphorylase b isoform 1; mannose-1-phosphate guanylyltransferase; amphoterin induced gene 3. [source:refseq;acc:nm\_013334]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1519\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
general control of amino acid synthesis protein 5-like 2 (ec 2.3.1.-) (histone acetyltransferase gcn5) (hsgcn5). [source:swissprot;acc:q92830]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1944\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7648.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7210.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06079\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
general vesicular transport factor p115 (transcytosis associated protein) (tap) (vesicle docking protein). [source:swissprot;acc:o60763]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2156\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6000.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5701.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0523\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggppsase) (geranylgeranyl diphosphate synthase) [includes: dimethylallyltransferase (ec 2.5.1.1); geranyltranstransferase (ec 2.5.1.10); farnesyltranstransferase (ec 2.5.1.29)]. [source:swissprot;acc:o95749]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1203\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4696.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4322.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08638\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
geranylgeranyl transferase type i beta subunit (ec 2.5.1.-) (type i protein geranyl-geranyltransferase beta subunit) (ggtase-i-beta). [source:swissprot;acc:p53609]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2366\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5492.28\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5265.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04298\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
geranylgeranyl transferase type ii beta subunit (ec 2.5.1.-) (rab geranylgeranyltransferase beta subunit) (rab geranyl- geranyltransferase beta subunit) (rab gg transferase beta) (rab ggtase beta). [source:swissprot;acc:p53611]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2963\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
germ cell specific y-box binding protein; contrin. [source:refseq;acc:nm\_015982]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2096\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7051.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6682.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05522\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/