MK5 Microarray Data

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

Affected Genes

Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].

Regulation	Ratio	description	Class	Accession	Gene Ontology	Gene	Minimum Ratio	Maximum Ratio

Results: HTML CSV LaTeX

Showing element 2569 to 2618 of 2667 in total

Regulation  : up

Ratio	description	Class	Gene Ontology
4.40598	GMP reductase 1 (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase 1) (Guanosine monophosphate reductase 1). [Uniprot/SWISSPROT;Acc:P36959]	biological process	response to cold
		molecular function	catalytic activity
			GMP reductase activity
			metal ion binding
			oxidoreductase activity
			potassium ion binding
4.55177	Transcription factor SOX-14. [Uniprot/SWISSPROT;Acc:O95416]	biological process	establishment and/or maintenance of chromatin architecture
			nervous system development
			regulation of transcription, DNA-dependent
			transcription
		cellular component	chromatin
			nucleus
		molecular function	DNA binding
			transcription factor activity
4.55371	Parathyroid hormone/parathyroid hormone-related peptide receptor precursor (PTH/PTHr receptor) (PTH/PTHrP type I receptor). [Uniprot/SWISSPROT;Acc:Q03431]	biological process	G-protein signaling, coupled to cyclic nucleotide second messenger
			signal transduction
			skeletal development
		cellular component	cytoplasm
			integral to membrane
			integral to plasma membrane
			membrane
			nucleus
		molecular function	G-protein coupled receptor activity
			parathyroid hormone receptor activity
			receptor activity
4.67988	Potassium voltage-gated channel subfamily A member 3 (Voltage-gated potassium channel subunit Kv1.3) (HPCN3) (HGK5) (HuKIII) (HLK3). [Uniprot/SWISSPROT;Acc:P22001]	biological process	dicarboxylic acid transport
			ion transport
			potassium ion transport
		cellular component	integral to membrane
			membrane
			membrane fraction
			voltage-gated potassium channel complex
		molecular function	delayed rectifier potassium channel activity
			ion channel activity
			outward rectifier potassium channel activity
			potassium ion binding
			protein binding
			sodium:dicarboxylate symporter activity
			voltage-gated ion channel activity
			voltage-gated potassium channel activity
4.87049	zinc finger, FYVE domain containing 26 [RefSeq_peptide;Acc:NP_056161]	cellular component	intracellular
		molecular function	metal ion binding
			nucleic acid binding
			zinc ion binding
5.01332	Ufm1-specific protease 2 (EC 3.4.22.-) (UfSP2). [Uniprot/SWISSPROT;Acc:Q9NUQ7]	biological process	ubiquitin cycle
		molecular function	cysteine-type peptidase activity
			thiolester hydrolase activity
5.19755	Adiponectin receptor protein 1 (Progestin and adipoQ receptor family member I). [Uniprot/SWISSPROT;Acc:Q96A54]	biological process	fatty acid oxidation
			hormone-mediated signaling
			lipid metabolic process

Legend:
- The Ratio specifies how much this gene is up/down regulated. When up- or down-regulated must this value respectively be multiplied/divided to obtain the MK5 on concentration based on the MK5 off concentration.
- The Regulation specifies how this gene is affected when going from the MK5 off cells to the MK5 on cells.
- The Class refers to the ontology category, which can be molecular_function, biological_process or cellular_component.
- The Gene Ontology terms as linked to the specific gene.
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Accession is the GO accession key.
- Minimum Ratio is the lowest expected regulation ratio based on the replicate slides and a 95% symmetric confidence interval.
- Maximum Ratio is the highest expected regulation ratio based on the replicate slides and a 95% symmetric confidence interval.