MK5 Microarray Data

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

Gene Enrichment

The table below show, solely based on the number of genes affected in a specific categroy, which classes are enriched (up) or depleted (down). Thje p-value is calculated according to 'GOToolBox: functional analysis of gene datasets based on Gene Ontology - David Martin, Christine Brun, Elisabeth Remy, Pierre Mouren, Denis Thieffry and Bernard Jacq'. We used the mouse-goa annotation from 2005 to perform this analysis.

Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].

p	Ratio	description	Accession	neuronal

Results: HTML CSV LaTeX

Showing element 51 to 100 of 239 in total

p	Ratio	description	neuronal
0.00245746	down	NAD binding	no value
0.0025796	up	positive regulation of transcription
		regulation of transcription from RNA polymerase II promoter
0.00273397	down	ubiquitin-protein ligase activity
0.00308834	up	identical protein binding
0.00356939		signal transduction
0.00362499	down	metabotropic glutamate receptor signaling pathway	1
0.00369746		glycolysis	no value
0.00383965	up	aldehyde dehydrogenase [NAD(P)+] activity
		histamine receptor activity
		interleukin-1 receptor activity
		membrane coat
		nucleoside transporter activity
0.00391116		soluble fraction
0.0040154	down	glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity
0.00425207	up	cell cycle
0.00504034		mitosis
0.00564318		circulation
		dopamine receptor activity	1
		ligand-dependent nuclear receptor activity	no value
		positive regulation of I-kappaB kinase/NF-kappaB cascade
0.00614065		RNA polymerase II transcription factor activity
0.00664368		negative regulation of cell growth
0.00670433		voltage-gated ion channel activity	1
0.00718696	down	regulation of transcription, DNA-dependent	no value
0.00726676	up	multicellular organismal development
0.00759448		protein serine/threonine phosphatase activity
0.00774091		acetyltransferase activity
		electron carrier activity	1
		ER-Golgi intermediate compartment	no value
		guanyl nucleotide binding
		positive regulation of body size
		retinoic acid metabolic process
0.00803044	down	binding
0.00833399	up	regulation of transcription
0.00836988		intracellular
0.00878703		nervous system development	1
0.00916333		visual perception
0.00965867	down	mitochondrion	no value
0.00970846	up	chromosome, pericentric region
0.0100316		potassium ion binding	1
0.0101128		anatomical structure morphogenesis	no value
		humoral immune response
0.0105006	down	trypsin activity
0.0107462	up	microtubule binding
0.01078	down	Golgi stack
0.0108714	up	nucleoplasm
0.0109032		endoplasmic reticulum
0.0109353		calmodulin binding
0.0111584	down	metabotropic glutamate, GABA-B-like receptor activity	1

Legend:
- The Ratio specifies how much this gene is up/down regulated. When up- or down-regulated must this value respectively be multiplied/divided to obtain the MK5 on concentration based on the MK5 off concentration.
- Accession is the GO accession key.
- Part of neuralk circuitery.