MK5 Microarray Data

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

Affected Genes

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Ratio	Regulation	description	Class	Gene Ontology	Gene	Accession	Minimum Ratio	Maximum Ratio

Results: HTML CSV LaTeX

Showing element 1 to 50 of 1166 in total

Regulation  : down

Ratio	description	Class	Gene Ontology
7.45006	MAP7 domain containing 1 [RefSeq_peptide;Acc:NP_060537]	biological process	G-protein coupled receptor protein signaling pathway
		cellular component	integral to membrane
		molecular function	histamine receptor activity
			structural constituent of cell wall
6.56408	DNA-directed RNA polymerase III subunit RPC8 (RNA polymerase III subunit C8) (DNA-directed RNA polymerase III subunit H) (DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide). [Uniprot/SWISSPROT;Acc:Q9Y535]	biological process	transcription
			transcription from RNA polymerase III promoter
		cellular component	DNA-directed RNA polymerase III complex
			nucleoplasm
			nucleus
		molecular function	DNA-directed RNA polymerase activity
			protein binding
6.3909	Protein Jade-1 (PHD finger protein 17). [Uniprot/SWISSPROT;Acc:Q6IE81]	biological process	apoptosis
			intracellular signaling cascade
			negative regulation of cell growth
			regulation of transcription, DNA-dependent
			response to stress
			transcription
		cellular component	cytoplasm
			nucleus
		molecular function	metal ion binding
			protein binding
			zinc ion binding
5.84607	Tubulin-specific chaperone E (Tubulin-folding cofactor E). [Uniprot/SWISSPROT;Acc:Q15813]	biological process	axonogenesis
			beta-tubulin folding
			microtubule cytoskeleton organization and biogenesis
			protein folding
			protein modification process
		cellular component	cytoplasm
			cytoskeleton
			microtubule
		molecular function	chaperone binding
			protein binding
5.83544	Nucleoplasmin-2. [Uniprot/SWISSPROT;Acc:Q86SE8]	biological process	chromatin remodeling
			embryonic development
			oocyte differentiation
			positive regulation of meiosis
			regulation of exit from mitosis
			single fertilization
		cellular component	cytoplasmic chromatin
			nuclear chromatin
			nucleus
		molecular function	histone binding
			nucleic acid binding
5.61927	RING finger protein 170 (Putative LAG1-interacting protein). [Uniprot/SWISSPROT;Acc:Q96K19]	biological process	transport
		cellular component	integral to membrane
			membrane
		molecular function	metal ion binding
			nucleoside transporter activity
			protein binding
			zinc ion binding

Legend:
- The Ratio specifies how much this gene is up/down regulated. When up- or down-regulated must this value respectively be multiplied/divided to obtain the MK5 on concentration based on the MK5 off concentration.
- The Regulation specifies how this gene is affected when going from the MK5 off cells to the MK5 on cells.
- The Class refers to the ontology category, which can be molecular_function, biological_process or cellular_component.
- The Gene Ontology terms as linked to the specific gene.
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Accession is the GO accession key.
- Minimum Ratio is the lowest expected regulation ratio based on the replicate slides and a 95% symmetric confidence interval.
- Maximum Ratio is the highest expected regulation ratio based on the replicate slides and a 95% symmetric confidence interval.