Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

Affected Genes


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Ratio Regulation description Class Gene Ontology Gene Accession Minimum Ratio Maximum Ratio
Results: HTML CSV LaTeX Showing element 2501 to 2550 of 2667 in total
Ratio
Regulation
description
Class
Gene Ontology
4.62042 down Leukocyte antigen CD37 (Tetraspanin-26) (Tspan-26). [Uniprot/SWISSPROT;Acc:P11049] biological process protein amino acid N-linked glycosylation
visual perception
cellular component integral to membrane
integral to plasma membrane
membrane
plasma membrane
4.67988 up Potassium voltage-gated channel subfamily A member 3 (Voltage-gated potassium channel subunit Kv1.3) (HPCN3) (HGK5) (HuKIII) (HLK3). [Uniprot/SWISSPROT;Acc:P22001] biological process dicarboxylic acid transport
ion transport
potassium ion transport
cellular component integral to membrane
membrane
membrane fraction
voltage-gated potassium channel complex
molecular function delayed rectifier potassium channel activity
ion channel activity
outward rectifier potassium channel activity
potassium ion binding
protein binding
sodium:dicarboxylate symporter activity
voltage-gated ion channel activity
voltage-gated potassium channel activity
4.69231 down Arylamine N-acetyltransferase 2 (EC 2.3.1.5) (Arylamide acetylase 2) (Polymorphic arylamine N-acetyltransferase) (PNAT) (N- acetyltransferase type 2) (NAT-2). [Uniprot/SWISSPROT;Acc:P11245] biological process metabolic process
cellular component cytoplasm
molecular function acetyltransferase activity
arylamine N-acetyltransferase activity
transferase activity
4.71132 Pyruvate kinase isozymes R/L (EC 2.7.1.40) (R-type/L-type pyruvate kinase) (Red cell/liver pyruvate kinase) (Pyruvate kinase 1). [Uniprot/SWISSPROT;Acc:P30613] biological process glycolysis
response to other organism
cellular component cellular_component
molecular function magnesium ion binding
potassium ion binding
pyruvate kinase activity
transferase activity
4.87049 up zinc finger, FYVE domain containing 26 [RefSeq_peptide;Acc:NP_056161] cellular component intracellular
molecular function metal ion binding
nucleic acid binding
zinc ion binding
4.90535 down DAZ-associated protein 2 (Deleted in azoospermia-associated protein 2). [Uniprot/SWISSPROT;Acc:Q15038] protein binding
4.93372 Ankyrin repeat and SOCS box protein 12 (ASB-12). [Uniprot/SWISSPROT;Acc:Q8WXK4] biological process intracellular signaling cascade
5.01332 up Ufm1-specific protease 2 (EC 3.4.22.-) (UfSP2). [Uniprot/SWISSPROT;Acc:Q9NUQ7] ubiquitin cycle
molecular function cysteine-type peptidase activity
thiolester hydrolase activity
5.19755 Adiponectin receptor protein 1 (Progestin and adipoQ receptor family member I). [Uniprot/SWISSPROT;Acc:Q96A54] biological process fatty acid oxidation
hormone-mediated signaling
lipid metabolic process
cellular component integral to membrane
membrane
molecular function hormone binding
identical protein binding
protein heterodimerization activity

Legend:
- The Ratio specifies how much this gene is up/down regulated. When up- or down-regulated must this value respectively be multiplied/divided to obtain the MK5 on concentration based on the MK5 off concentration.
- The Regulation specifies how this gene is affected when going from the MK5 off cells to the MK5 on cells.
- The Class refers to the ontology category, which can be molecular_function, biological_process or cellular_component.
- The Gene Ontology terms as linked to the specific gene.
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Accession is the GO accession key.
- Minimum Ratio is the lowest expected regulation ratio based on the replicate slides and a 95% symmetric confidence interval.
- Maximum Ratio is the highest expected regulation ratio based on the replicate slides and a 95% symmetric confidence interval.

- http://analysis.yellowcouch.org/