Deep Sequencing Notes

How to split lanes towards different customers

A problem we faced when working with data from customers was that each flowcell can contain multiple experiments (8), sometimes with a controllane, sometimes not. In all cases we wanted to give _only_ the necessary data to the customers. So lanes from different experiments should not go to the wrong guy/gal.

To solve this we relied on rsync again

rsync -xav --exclude "s_[2345678]" will exclude everything from different customers.

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